ChIP-Atlas: Target genes

Potential target genes for Rara

Query protein: Rara
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4369776 | Germline stem cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Rara's Target genes

◢ Rara: Average

◢ SRX3301664: Embryonic limb

◢ SRX3301665: Embryonic limb

◢ SRX018669: ES cells

◢ SRX208055: ES cells

◢ SRX208062: ES cells

◢ SRX520462: F9

◢ SRX520468: F9

◢ SRX520474: F9

◢ SRX520479: F9

◣ SRX4369776: Germline stem cells

◢ SRX4369779: Germline stem cells

◢ SRX4369782: Germline stem cells

◢ SRX4369785: Germline stem cells

◢ SRX337439: Liver

◢ SRX018670: mESC derived neural cells

◢ SRX118692: mESC derived neural cells

◢ SRX118693: mESC derived neural cells

◢ SRX675957: Th1 Cells

◢ Rara: STRING

Greb1
Olfr806
Abhd6
Wwox
Cldn34d
Nkx2-6
Setd4
Cbr1
Aadacl2fm1
Tmem18
Gm525
Kpna1
Vmn2r102
Pald1
Gm20594
Gzmk
Fbxw4
Tent5c
Sympk
Oasl1
Csf2ra
Cox8c
Tmem211
Pcdh20
Olfm1
Tecpr1
Cdh12
E030030I06Rik
Slc14a2
Taar6
Taar7a
Vmn2r72
Stk11
Sbno2
Chchd5
Agpat3
Acacb
Hexb
Gm5458
Txndc11
Gcgr
Esr1
Vmn2r4
Dcdc2a
Cartpt
Tmem125
Alg8
Olfr855
Olfr854
Tmem267
Chd9
Clcn4
Fbxo27
Hgsnat
Timp3
Il31ra
Erg
Ankar
Eef2
Dapk3
Gm10710
Dchs2
Atp5g1
Rab34
Proca1
Cplane2
Vmn1r2
Rbks
Babam2
Olfr1274
Abca3
Abca17
Cbr3
Aoc3
Tacr2
Eif2b3
Ifna13
Pramel32
Zfp143
Atg2a
Tm2d2
Adam9
Pex3
Adat2
Nfam1
Ankrd39
Ankrd23
Adap1
Mink1
Tmprss6
4931408C20Rik
Dock1
Smarca5
Cebpb
Col6a6
Gpn2
Spint4
Usp33
Miga1
Trim50
Fkbp6
Wfdc13
U2af1
Pisd
Cdkn2d
Oxgr1
Speer4f1
Sstr1
Uri1
Cln8
Pspn
Clpp
Alkbh7
Auh
Nek2
Mab21l3
Tomm5
Intu
Atp9a
Plekhn1
Klhl17
Slx1b
Bola2
Ubxn8
Coro1a
Gsr
Map2k6
Tm4sf5
Zfp438
Rarb
Aldh9a1
Dhdds
4932438H23Rik
Setdb2
Gm45935
Cab39l
Rab3a
Mpv17l2
Ifi30
Stra8
Wdr91
Abl1
Maats1
Cox17
Txndc5
Acap1
Ccdc88b
Kctd11
Dcun1d1
Ly6l
Ttc24
Iqgap3
Pdcd1lg2
Sox8
Lmf1
Hspa5
Thada
Bmt2
Guf1
Sspn
Foxp1
Zar1l
Rgs12
Fam47e
Gltp
1810010H24Rik
Tmem259
Cnn2
Arf4
Ice1
Cd163l1
Ntrk2
Wdr63
Bcl10
Sptbn4
Blvrb
Fndc3b
Gm19428
Ggt6
Zbtb40
Pim1
Marchf3
H3c8
Tex14
Jund
Mcl1
Slc15a1
Iqcn
H4c8
H2ac10
Slc7a15
H2bc6
Pibf1
Dis3
Tet2
Eapp
Arl4d
Fbxw7
Akirin2
Rad23a
Calr
Cdv3
Ube2s
Bmpr1b
H3c10
H2bc13
H2ac13
Oxnad1
Dph3
Adgra2
H4c3
H1f6
H1f3
Tmem231
Gabarapl2
H3c2
H2ac4
Kcnk5
Efnb3
Tmem33
Plekhb1
Rplp2
H4c2
H4c1
H3c1
Camk2n1
Fam227b
Dtwd1
Nemf
H4c6
H3c7
H2bc9
Hivep3
Zfp949
H3c3
H2bc3
H4c4
H3c4
Aqp3
Ints3
BC107364
Tmem181a
H2bc7
H2ac7
Trim29
Ccdc171
Hmox2
Slc25a22
Pidd1
Socs3
Rps29
Lrr1
H1f2
Gpx4
Znfx1
Clec2g
Zfhx2
Thtpa
Fubp3
Slc43a1
Bbs1
Gnb5
H3c6
H2bc8
H2ac8
Xbp1
Mtf2
H4c11
H2bc12
H2ac12
Olfr180
Unk
H3f3b
Maneal
Pdgfrb
Cdx1
Tm7sf3
Med21
Rdm1
H4c9
H2bc11
H2ac11
Prdx6
LOC666331
Gm11634
Ilf2
Rasip1
Izumo1
Hoxb13
Zbtb4
Slc35g3
Polr2a
Taf13
Ttc39d
Bcl2a1a
Mkrn1
Fut1
Fgf21
Bcl2a1b
Ovol2
Fitm2
H1f1
Cmip
Mycn
Cerk
Agpat5
Notch4
Prl3c1
Creb3l3
Ubb
Cdk15
Tmem191c
Tfrc
Ier5
Abr
H2bc14
Mylip
Rpgrip1
Dnah7b
Cxcl1
Bmerb1
H3c11
H2bc22
H2ac22
H1f5
Rhobtb1
A930033H14Rik
Oaz2
Adcy5
Adam5
Srp14
Trim7
Cyp26a1
Poldip3
Nudt4
P4ha3
Hspa8
1700037H04Rik
Taf4
Bcl2a1d
Dennd2c
H3c15
H3c14
H2ac19
H2ac18
Klf2
Cd209a
Plbd2
H4bc24
H2bc23
H2ac24
H2ac23
Prxl2b
Gramd1b
Dpagt1
Kat7
Cyth4
Ier2
Vgll2
Usp25
Hoxb4
Xylb
Sub1
Rsph3b
H4c14
H3c13
H2bc18
Pigz
H4c18
Ncor1
Capns1
Mtnr1a
Brwd1
Ing1
Cars2
Ksr1
Rnf19b
Ect2
Trib3
Eif4a2
H4f16
H2aj
Lag3
Ifitm7
Ucp2
Trpm3
Enpp4
Tmem131l
Taf12
Gmeb1
Kcnj16
Mettl14
Malt1
Prkdc
Mcm4
Ints6
Fam24b
Fam24a
Cuzd1
Pom121l2
Cidea
Gm36210
Snai1
Fbxo44
Fbxo2
Nabp1
Rnf13
Tcp11
Rcc1
Fhl1
Cd44
Ccin
Ap3s2
Mreg
Tll1
Osbpl1a
Tnfsfm13
Tnfsf12
Srsf3
H2bc21
H2ac21
H2ac20
Tmigd1
Baz1b
Mafa
H2bc4
H2ac6
Xpo1
Extl1
Tal2
Dlg4
Acadvl
Hmbs
H2ax
Golga7
Bcat2
Gja4
Gadd45b
Akap8l
Slc13a2
Mdga1
Cic
H4c17
Slc33a1
Galnt2
Habp2
Sertad2
Gmps
Pmepa1
Gtpbp4
Fcgr4
Ttpal
Evi5
Scn8a
Adgre5
Foxo3
Sgf29
Lasp1
Tgm4
Itga5
Tmem42
Gtf2a1
Unc93a2
Gstp2
Gstp1
Hjurp
A730008H23Rik
Kng2
Rarg
Mrps2
1700007K13Rik
Nfyb
2510009E07Rik
Eif4b
Arrdc2
H1f4
Rgs18
Fbxo6
Ncmap
Klf4
Wdtc1
Hsp90aa1
Ppp3r1
Hnrnpab
Fam53c
Cdc25c
Tctex1d4
Plk3
Btbd19
Tmem50a
Syf2
Rsrp1
Xpnpep1
Tmem167b
Phf5a
Aco2
Rph3al
Psmd12
Plekha7
Pitpnc1
Dppa2
Nodal
Btg2
Smc3
Sumo1
Mphosph9
2810006K23Rik
Rusc1
Nfrkb
Abcc12
Lrch4
Fbxo24
Asph
Map10
Rrn3
Grasp
Cnn3
Nufip2
Zbtb37
Rab7
H4c12
H2bc15
H2ac15
Angptl8
Ei24
Trim17
H3f4
Nop58
Tob1
Hoxb5
Ccdc92b
Sfi1
Eif4enif1
Jarid2
Rab37
Slc2a9
Cpa1
Smyd2
Npffr2
Gm3448
Gm3417
Cited2
Nudt1
Sp8
Hspb8
Zdhhc12
Pkn3
Icam1
C1qbp
Dusp9
Il17b
Ttk
Zfp827
Tsc22d1
Pus1
Ep400
Cyp11a1
Kdm3b
Prdx2
Junb
Ubr4
Pomgnt2
Hsd17b14
Nectin2
Sec22c
Ubxn2a
Atad2b
Usp37
Ranbp3l
Stra6
Fanci
Gm3435
Acy3
Trim41
Tefm
Pcx
Letmd1
Ggact
Porcn
Slc6a16
Cotl1
Cd37
Zdhhc18
Acsl4
Yars2
Hrob
Calm2
Hexim1
Cbx4
Syngr1
Rps11
Rpl3
Dctn6
Asgr1
Stk3
Caskin1
Tpm2
Ttf1
Cfap77
Rpl11
Pml
Dtx4
Ccn4
Car5a
Alg14
Actn4
Ppdpf
Atp2a2
Olfr646
Stap2
Septin1
Mpnd
Arl15
Mmp11
Gm867
Chchd10
Sde2
Olfr1359
Kctd2
Atp5h
Sirt4
Mtg2
Rnd3
9030025P20Rik
Bcar1
Map7
B4galnt3
Dcpp1
Unc93a
Ubc
Tmem170
Senp3
Hps5
Gtf2h1
Coa7
Pnp
Mybpc3
Pold2
Rab11fip2
Slc17a7
Onecut3
Wdr92
Rai1
Pno1
Utp14b
Acsl3
Zswim8
Chchd1
Hrh2
Thap4
Dgke
Spg20
Rnaset2b
Srsf5
Eif2s3y
Sntb2
Ndufb8
Mbd6
Ddit3
Ceacam12
Insig1
4921509C19Rik
Mettl7a2
Methig1
Higd1c
Txnip
Krt15
Krt13
Epha2
Dock6
Cenpm
Msgn1
Haus1
Atp5a1
Sdha
Ccdc127
Ninj2
Rnaset2a
Csrnp2
Ppp1r10
Mrps18b
Atat1
Slc9a1
Slc18b1
Rps12
Tmem135
Tube1
Fam229b
Dnajb9
Uck1
Coro1b
Sh3bp4
Fut8
Sumf1
Ndufs7
Idh3b
Atg14
Npbwr1
1700067K01Rik
Sbp
Mro
4921539E11Rik
Capn3
Carnmt1
Pbld2
Hnrnph3
Llgl2
Gm3415
Gm3402
Ddit4
4930449I24Rik
Btbd16
Klf6
Nsrp1
Hoxa1
Zfp36l1
Gja1
2410137M14Rik
Naglu
Aqp7
Sema4a
Mok
Haus4
Rnf169
Psma6
Acot7
Sbk2
Calm1
Rbm14
Gm21992
Usp4
Msh6
Gpx1
Wsb1
Ube2o
Cphx3
Cphx2
Cphx1
Acp6
Ss18
Sgk1
Rnf103
Tas2r134
Spata33
Myrf
Chmp1a
Gtf2a1l
Gtf2b
Ctsl
Sacm1l
Lrrc10b
Dcaf4
Psmd7
D230025D16Rik
Zfp532
Tro
C1ra
Eif4h
Hsp90ab1
Rfc5
Septin11
Prdm10
H2-DMa
Gm17660
Brd2
Trim40
Trim31
Raf1
Ifna6
Ifna5
Fus
Taok3
Aplp2
Atp1a1
Kdm3a
Blmh
Mrpl58
Gm648
Jpt1
Tbc1d10b
Mylpf
Tcim
Fbxo31
Mpp7
Gadd45a
Gpr152
Cabp4
Rsc1a1
Dpysl3
Jam2
Arg1
Ptprcap
Prdx1
Sec31b
Actb
Pick1
Hbegf
Eif4g2
Mettl16
Gpcpd1
Stk35
Rpl17
BC031181
Gapdh
Dnajc27
Dgat2
Nlrp4c
Srgn
Cfap74
Ctdsp2
AU018091
Atp6v0d1
Agrp
Slc25a13
Clu
Mat2a
Tubb4b
Stpg3
Slc34a3
Ptprf
Ifna7
Fam166a
Mrm2
S1pr2
Tcte3
Slc4a9
Phc1
Fam32a
Ermard
Cib3
BC005537
Kank3
Id3
Twsg1
Dhx8
Cyfip2
Zfp791
Elavl3
Thrsp
Copz1
Arhgap19
Ccng2
Ell3
Trmt1
Nacc1
Nanog
Sertad1
Magel2
Amy2a5
Amy2a4
Amy2a3
Amy2a2
Errfi1
Wif1
Adam32
Pltp
Tmbim1
Srsf2
Mfsd11
Mettl23
Jmjd6
Cox7a2l
Men1
Map4k2
Zfp740
Csad
Sf3b1
Eif4a1
Cd68
Serpinh1
Mknk2
Mib2
Mis18bp1
Aven
Tmem230
Tmem129
Tacc3
Slbp
Rsph3a
Pcna
Cds2
Dusp1
Appl2
Nphs1
Kirrel2
Sepsecs
Nme1
Zc3h12a
Tmed10
Tbl1xr1
P4ha1
Cdk5rap2
Skp1
Gucy1a2
Hagh
Fahd1
Gas1
G0s2
Fads1
Ndufaf3
Impdh2
Dhx9
Dalrd3
Mypn
Itga3
Bcl2l11
Misp3
Itch
Snrnp35
Rilpl2
Tnfrsf19
Ehd4
Dag1
Zswim3
Slc35b2
Ccdc58
Acot8
Etnk2
Dgat1
Ccdc102a
Trpm1
Sorbs1
Prdm14
Msi1
Slc12a7
Kcnk4
Gpr137
Bad
Chn2
Rab7b
Nipal1
Cnga1
Prpf38b
Dedd
Ankrd11
Slc29a1
Mymx
Lipf
Smdt1
Ndufa6
Lefty1
Atxn7l3b
Amd2
Amd1
Klf10
Tmem107
Btg1
Ghdc
Selenok
Hnrnpa2b1
Cbx3
Snx6
Gtf2f1
Adck5
Pik3c2a
Arl6ip1
H2-M5
Uqcr11
Tpst1
Mbd3
Faim
Dnaja1
Znhit1
Vstm4
Tnrc18
Plod3
Selenbp1
Amacr
Psmb7
Zfp119a
Mrpl37
Cyb5rl
Plekhf2
Ago2
Shank1
Clec11a
Steap4
Pknox1
Zfp980
Slc35d1
Cdh1
Mmp9
Fam25c
Trp53inp1
Tcta
Rhoa
Amt
Rpl15
Nkiras1
Ftl1
Dpp4
Bax
Luzp1
Ms4a1
Agpat2
Poli
Dop1b
Sema4f
M1ap
Exosc5