ChIP-Atlas: Target genes

Potential target genes for Rara

Query protein: Rara
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX018669 | ES cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Rara's Target genes

◢ Rara: Average

◢ SRX3301664: Embryonic limb

◢ SRX3301665: Embryonic limb

◣ SRX018669: ES cells

◢ SRX208055: ES cells

◢ SRX208062: ES cells

◢ SRX520462: F9

◢ SRX520468: F9

◢ SRX520474: F9

◢ SRX520479: F9

◢ SRX4369776: Germline stem cells

◢ SRX4369779: Germline stem cells

◢ SRX4369782: Germline stem cells

◢ SRX4369785: Germline stem cells

◢ SRX337439: Liver

◢ SRX018670: mESC derived neural cells

◢ SRX118692: mESC derived neural cells

◢ SRX118693: mESC derived neural cells

◢ SRX675957: Th1 Cells

◢ Rara: STRING

Wwox
Aadacl2fm1
Olfr806
Setd4
Cbr1
Tecpr1
Greb1
Slc14a2
Tent5c
Abhd6
Sympk
Gzmk
Pcdh20
Stk11
Sbno2
Hexb
Acacb
Vmn2r102
Gcgr
Nkx2-6
Kpna1
Cox8c
Esr1
Csf2ra
Lrch4
Fbxo24
Olfr1274
Stap2
Mpnd
Scn8a
Sbp
Tmem211
Zfp791
Tacr2
Il31ra
Cbr3
Olfm1
Tnfrsf18
Hrh2
Fbxw4
Cftr
Zfp949
Tgm4
Tmem42
E030030I06Rik
Iqsec1
Gm10710
Dchs2
Txndc11
Olfr855
Olfr854
Osbpl1a
Cerk
Mylip
Znhit1
Plod3
Rasip1
Izumo1
Fut1
Fgf21
Pik3c2g
Vmn1r203
Edil3
Rps29
Lrr1
Gm17660
Atp5g1
Col6a6
Fam227b
Dtwd1
Zscan4b
Asb8
Ccdc184
Fah
Gtf2a2
Pdcd7
Zdhhc17
Comt
Cd209a
Ifna13
Pramel32
Atg12
Ap3s1
Rhox8
Klrb1b
Olfr1031
Olfr1030
Olfr1029
Aldh9a1
Pax2
Plekhg4
Pik3c2a
Zfp715
Zfp143
Ldlr
Bbs2
Tyw1
Sbds
F11
Lgals7
Tmem178b
Sspn
Zfp598
Npw
Thg1l
Olfr781
2610008E11Rik
Defb11
Trim12a
Awat2
Vmn2r19
Colec10
Gulp1
Slc33a1
Gmps
Commd1
Zrsr1
Malt1
Rbp4
Pde6c
Etl4
Ppfia3
Prickle1
Pknox1
Nans
Rrad
Cdh16
Tgif1
Cldn34d
Prxl2b
Tfap4
Pbk
Olfr741
Slc43a1
Timm10
Snrpn
Rhbdd1
Ccdc73
Gabarapl1
Prr32
Olfr117
Myocd
Arl13a
Selenok
Nol11
Abcd3
Galnt6
Ly6c2
Nqo2
Rmi2
Ipo11
Dimt1
Gsdma2
Six6
Oasl1
Nemf
Wbp2
Lurap1l
Fgf22
Wdr92
Pno1
Ddx17
Asb6
Prl3c1
Npffr2
Rpl15
Nkiras1
Ct55
Spin2d
Med13
Zfp850
Col17a1
Klhdc7a
Slc45a2
Mstn
Grm7
Olfr390
Olfr389
Prrx1
Ezhip
Olfr620
Olfr619
Fgf13
Chrnb4
Shoc2
Bbip1
Mrpl15
Pnpla8
Itih5
2510009E07Rik
Nadsyn1
Dhcr7
Nfatc2ip
Klhl29
Tmigd1
Rin2
Setbp1
Plekhg1
Nfil3
E030018B13Rik
Frat1
Hbp1
Tmem43
Chchd4
Cyp2t4
Shb
Zfp810
Phkg2
Tmem265
Taar6
Acsl4
Taar7a
Gja1
Tram1
Myoz3
Coq10b
Hic2
Tmem108
Zfp46
C2
Zbtb12
Ehmt2
Mat1a
Sirpb1c
Trhde
Olfr1219
Calr3
1700030K09Rik
Thbs3
Mtx1
Naa11
Vmn1r251
Vmn1r241
Hip1
Vmn1r13
Ptprm
Taar7b
Olfr99
H2-M3
Spag17
Tacstd2
Tnfsf14
Gm4925
Arl1
Mroh7
Fam151a
Twist1
Car5a
Slc18b1
Rps12
Banp
Ankar
Slx1b
Bola2
Zdhhc12
Pkn3
Rps6
Zfp1
Ccdc124
Rpgrip1
Creb1
Eprs
Kbtbd3
Ndc80
Nupr1
Bag2
Nudcd2
Hmmr
Lhx5
Dcaf5
Abcb9
BC034090
Zfp607a
Dnah7b
Dgat1
Mtfr1l
Kdm3b
Scrt1
Ccsap
Zfp658
Tmem249
Slc52a2
Fbxl6
Mppe1
Fezf1
Rsph3b
Taco1
Prkdc
Mcm4
Gm20594
Ms4a1
Obi1
Skint6
Ddx20
Polr1b
Slx4ip
Anapc15
Olfr971
Mtln
Nrf1
Olfr774
Zfp53
Pold4
Incenp
Vmn2r42
Olfr1158
Tbx19
Ctxn3
Pth
Olfr1102
Olfr1101
Gm16445
Olfr850
Cbx7
Pramel19
Olfr805
Olfr594
Card11
Hoxd3
Gm14595
Gm14590
Meis3
Olfr1342
Hoxd4
Polr3f
Dzank1
Wls
Vmn1r37
Trim34b
Timm8a1
St8sia4
Gm7972
Gadd45b
Tmem30b
Lmnb2
1810037I17Rik
Myh14
Upk3bl
Arl6ip5
Lsm14a
Uba3
Prrg4
Per2
Ovol2
Alpl
Hectd1
Mup9
Aven
Wiz
Vps8
Ghrl
2700062C07Rik
Ergic1
Ubb
Rab7
Susd1
Mup20
Pou4f3
Dpp9
Naa50
Atp6v1a
Pax3
Fis1
Nudt18
Seh1l
Arhgap18
Dpysl5
Rbks
Babam2
Pcdhgb8
Pcdhga12
Tmem125
Erbb3
Lrfn1
Itgb2
Arg1
Dnajb14
Zscan4f
Zscan4c
Net1
Tnfrsf9
Tle4
Sncaip
Tmem267
Elk4
Olfr1008
Med26
Fbxo4
Gcnt1
Pym1
Dgka
Akap13
Nudcd1
Eny2
Gm7714
Pja1
Polr1d
Lnx2
Zfp110
Selenoo
Nrg1
Dennd11
Qk
1700125H20Rik
Armcx1
Krtap3-3
Krtap3-2
Krtap3-1
A930009A15Rik
Vmn2r12
Olfr281
S100a5
Cdyl2
Pxk
Fyb2
Tlr13
S100a4
S100a3
S100a2
Olfr729
Olfr728
Olfr46
Olfr1351
Gm11545
Col1a2
Poldip3
Tmbim6
Rpl38
Rad18
Mmp25
Plekhb1
Abl1
Saraf
Leprotl1
Nbeal1
Senp8
Myo9a
Tmem132d
Clk1
Rnf220
Egln3
Lfng
En1
Anpep
Exd2
Cd1d2
Cd1d1
Rps9
Abr
Opa1
Snx10
Ubp1
Stx11
Snurf
Tet2
Coa4
Zfp748
Dtx3
Arhgef25
Slc38a10
Dusp14
Wsb1
Hunk
Ankrd11
Rprd2
Pigz
Ncbp2
0610012G03Rik
Pald1
Gm10639
Rab34
Proca1
Troap
Adcy9
Stac2
Zfp148
Ptpn13
Xpnpep1
Ncam1
C130073F10Rik
N4bp2l2
Hpx
Zfp263
Spdye4a
Cdrt4
Ambra1
Gstk1
Map3k20
Csn1s2a
Olfr482
Calb2
Gm4894
Psip1
Olfr960
Olfr1197
Fpr3
Cracdl
Hmox2
Rsph3a
Bptf
Ttc26
Cdc25a
Spry2
Snapc3
Npm2
Elf2
Ky
Clcn4
Ctf2
Trrap
Tmem130
Cdc20b
Pcbp1
Gpx8
Cdh12
Rbm4b
Zfp866
Elavl2
Gm5414
Nqo1
Fyco1
Rarg
Mtmr6
Kdm6b
Adipor2
Letmd1
Psmb2
Knop1
Iqck
Spata33
Chmp1a
Dcaf10
Ncmap
Rusc1
Rplp2
Slc25a22
Pidd1
Dop1b
Baz1b
Fbxo5
Foxp1
Jund
Slc39a7
Rxrb
H2-Ke6
Col11a2
Denr
Marchf3
H3c8
Tex14
Mcl1
Slc15a1
Iqcn
H4c8
H2ac10
Slc7a15
H2bc6
Pibf1
Dis3
Eapp
Gm525
Arl4d
Fbxw7
Akirin2
Rad23a
Calr
Cdv3
Ube2s
Bmpr1b
H3c10
H2bc13
H2ac13
Oxnad1
Dph3
Adgra2
H4c3
H1f6
H1f3
Tmem231
Gabarapl2
H3c2
H2ac4
Kcnk5
Efnb3
Tmem33
H4c2
H4c1
H3c1
Camk2n1
H4c6
H3c7
H2bc9
Rarb
Hivep3
H3c3
H2bc3
H4c4
H3c4
Aqp3
Ints3
Uri1
BC107364
Tmem181a
H2bc7
H2ac7
Trim29
Ccdc171
Socs3
H1f2
Gpx4
Znfx1
Clec2g
Zfhx2
Thtpa
Fubp3
Tomm5
Bbs1
Gnb5
H3c6
H2bc8
H2ac8
Xbp1
Mtf2
H4c11
H2bc12
H2ac12
Olfr180
Unk
H3f3b
Maneal
Pdgfrb
Cdx1
Tm7sf3
Med21
Rdm1
H4c9
H2bc11
H2ac11
Prdx6
LOC666331
Gm11634
Ilf2
Hoxb13
Zbtb4
Slc35g3
Polr2a
Taf13
Ttc39d
Bcl2a1a
Mkrn1
Bcl2a1b
Abca3
Fitm2
H1f1
Cmip
Mycn
Abca17
Agpat5
Notch4
Creb3l3
Cdk15
Tmem191c
Tfrc
Ier5
H2bc14
Cxcl1
Bmerb1
H3c11
H2bc22
H2ac22
H1f5
Rhobtb1
A930033H14Rik
Pspn
Clpp
Alkbh7
Oaz2
Adcy5
Adam5
Srp14
Trim7
Cyp26a1
Nudt4
P4ha3
Hspa8
1700037H04Rik
Taf4
Bcl2a1d
Tmem18
Dennd2c
H3c15
H3c14
H2ac19
H2ac18
Klf2
Plbd2
H4bc24
H2bc23
H2ac24
H2ac23
Gramd1b
Dpagt1
Kat7
Cyth4
Ier2
Vgll2
Tm2d2
Adam9
Usp25
Hoxb4
Xylb
Sub1
H4c14
H3c13
H2bc18
H4c18
Ncor1
Capns1
Mtnr1a
Brwd1
Ing1
Cars2
Ksr1
Rnf19b
Ect2
Trib3
Eif4a2
H4f16
H2aj
Lag3
Ifitm7
Ucp2
Trpm3
Hspa5
Enpp4
Tmem131l
Taf12
Gmeb1
Kcnj16
Mettl14
Fndc3b
Ints6
Fam24b
Fam24a
Cuzd1
Pom121l2
Cidea
Gm36210
Snai1
Fbxo44
Fbxo2
Nabp1
Rnf13
Tcp11
Rcc1
Fhl1
Cd44
Ccin
Ap3s2
Mreg
Tll1
Nek2
Tnfsfm13
Tnfsf12
Srsf3
H2bc21
H2ac21
H2ac20
Mafa
H2bc4
H2ac6
Xpo1
Extl1
Tal2
Dlg4
Acadvl
Hmbs
H2ax
Golga7
Bcat2
Gja4
Akap8l
Slc13a2
Mdga1
Cic
H4c17
Bmt2
Galnt2
Habp2
Sertad2
Pmepa1
Gtpbp4
Fcgr4
Ttpal
Evi5
Adgre5
Foxo3
Sgf29
Lasp1
Itga5
Gtf2a1
Unc93a2
Gstp2
Gstp1
Hjurp
A730008H23Rik
Kng2
Mrps2
1700007K13Rik
Nfyb
Eif4b
Arrdc2
H1f4
Rgs18
Fbxo6
Klf4
Wdtc1
Hsp90aa1
Ppp3r1
Hnrnpab
Fam53c
Cdc25c
Tctex1d4
Plk3
Btbd19
Tmem50a
Syf2
Rsrp1
Tmem167b
Phf5a
Aco2
Rph3al
Psmd12
Plekha7
Pitpnc1
Dppa2
Nodal
Btg2
Smc3
Sumo1
Mphosph9
2810006K23Rik
Nfrkb
Abcc12
Asph
Map10
Rrn3
Grasp
Cnn3
Nufip2
Zbtb37
H4c12
H2bc15
H2ac15
Angptl8
Ei24
Trim17
H3f4
Nop58
Tob1
Hoxb5
Ccdc92b
Sfi1
Eif4enif1
Jarid2
Rab37
Slc2a9
Cpa1
Smyd2
Gm3448
Gm3417
Arf4
Cited2
Nudt1
Sp8
Hspb8
Icam1
C1qbp
Dusp9
Il17b
Ttk
Zfp827
Tsc22d1
Pus1
Ep400
Cyp11a1
Prdx2
Junb
Ubr4
Pomgnt2
Hsd17b14
Nectin2
Sec22c
Ubxn2a
Atad2b
Usp37
Ranbp3l
Stra6
Fanci
Gm3435
Acy3
Trim41
Tefm
Pcx
Ggact
Porcn
Slc6a16
Cotl1
Cd37
Zdhhc18
Yars2
Hrob
Calm2
Hexim1
Cbx4
Syngr1
Rps11
Rpl3
Dctn6
Asgr1
Stk3
Caskin1
Tpm2
Ttf1
Cfap77
Rpl11
Pml
Dtx4
Ccn4
Alg14
Actn4
Ankrd39
Ppdpf
Atp2a2
Olfr646
Septin1
Arl15
Mmp11
Gm867
Chchd10
Sde2
Olfr1359
Kctd2
Atp5h
Sirt4
Mtg2
Chd9
Rnd3
9030025P20Rik
Bcar1
Map7
B4galnt3
Dcpp1
Unc93a
Ubc
Tmem170
Senp3
Hps5
Gtf2h1
Coa7
Pnp
Mybpc3
Pold2
Rab11fip2
Slc17a7
Onecut3
Rai1
Utp14b
Acsl3
Zswim8
Chchd1
Thap4
Dgke
Spg20
Rnaset2b
Srsf5
Eif2s3y
Sntb2
Ndufb8
Mbd6
Ddit3
Ceacam12
Insig1
4921509C19Rik
Mettl7a2
Methig1
Higd1c
Stra8
Txnip
Krt15
Krt13
Epha2
Dock6
Cenpm
Msgn1
Haus1
Atp5a1
Sdha
Ccdc127
Ninj2