ChIP-Atlas: Target genes

Potential target genes for Rara

Query protein: Rara
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX018670 | mESC derived neural cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Rara's Target genes

◢ Rara: Average

◢ SRX3301664: Embryonic limb

◢ SRX3301665: Embryonic limb

◢ SRX018669: ES cells

◢ SRX208055: ES cells

◢ SRX208062: ES cells

◢ SRX520462: F9

◢ SRX520468: F9

◢ SRX520474: F9

◢ SRX520479: F9

◢ SRX4369776: Germline stem cells

◢ SRX4369779: Germline stem cells

◢ SRX4369782: Germline stem cells

◢ SRX4369785: Germline stem cells

◢ SRX337439: Liver

◣ SRX018670: mESC derived neural cells

◢ SRX118692: mESC derived neural cells

◢ SRX118693: mESC derived neural cells

◢ SRX675957: Th1 Cells

◢ Rara: STRING

Setd4
Cbr1
Aadacl2fm1
Olfr806
Wwox
Tecpr1
Sympk
Greb1
Slc14a2
Abhd6
Stk11
Sbno2
Tent5c
Gzmk
Hexb
Vmn2r102
Nkx2-6
Gcgr
Pcdh20
Kpna1
Esr1
Cox8c
Acacb
Scn8a
Csf2ra
Tacr2
Olfr1274
Tmem211
Zfp791
Tnfrsf18
Gm10710
Dchs2
Stap2
Mpnd
Cd209a
Lrch4
Fbxo24
Wdr92
Pno1
Sbp
Olfm1
Hrh2
Osbpl1a
E030030I06Rik
Txndc11
Pik3c2g
Zfp658
Aldh9a1
Aven
Mylip
Iqsec1
Olfr781
Zfp949
Fbxw4
Znhit1
Plod3
Skint6
Nans
Cerk
Zfp46
Pdcd7
Grm7
Selenok
Kbtbd3
Nfatc2ip
Cyp2t4
Atp5g1
Il31ra
Ct55
Vmn1r203
Gulp1
Prr32
Olfr390
Olfr389
Gm17660
Ankar
Fah
Cldn34d
Zfp598
Npw
Polr1b
Ly6c2
Defb11
Edil3
Cftr
Ppfia3
Tgm4
Tmem42
Gtf2a2
Zfp1
Zfp715
Olfr117
Myocd
Sirpb1c
Tmem132d
Cbr3
Nudcd2
Hmmr
Rprd2
Gadd45b
Lmnb2
Pbk
Plekhg1
Comt
Tprn
Tmem203
Ndor1
Phkg2
Tmem265
Ifna13
Pramel32
Rsph3a
2610008E11Rik
1810037I17Rik
Rrad
Cdh16
Trhde
Olfr1219
Olfr1158
Mup20
Scgb2b26
Acsl4
Pald1
Rsph3b
Med13
Mup9
Rpl15
Nkiras1
Calr3
1700030K09Rik
Plekhg4
Tbx19
Pknox1
Lgals7
Nol11
Pik3c2a
Ms4a1
Olfr741
Snrpn
Rhox8
Klrb1b
Exd2
Thbs3
Mtx1
Ctxn3
Akr1b7
Dntt
F11
Col17a1
Tmem178b
Arg1
Spdye4a
Galnt6
Etl4
Six6
Rasip1
Izumo1
Fut1
Fgf21
Gm20594
Zdhhc17
Ndc80
Rps29
Lrr1
Eprs
Asb8
Ccdc184
Myoz3
Ifna6
Ifna5
Cstdc4
Rhbdd1
Olfr1008
1700028K03Rik
Rmi2
Fbxo4
Trim12a
3300002I08Rik
Prrx1
Ezhip
Zfp810
Naa11
Pth
Olfr1102
Olfr1101
Lrch1
Ifna4
Slc33a1
Gmps
Wbp2
Dok6
Nemf
Car5a
Banp
Rbm34
BC034090
Shb
Rbp4
Pde6c
C2
Zbtb12
Ehmt2
Ubb
Rin2
Oasl1
Ddx20
Shoc2
Bbip1
Prickle1
Pax2
Tgif1
Abl1
Olfr855
Olfr854
Tmem135
Abcd3
Rassf9
Atg12
Ap3s1
Olfr971
Katnbl1
Lurap1l
Mettl7b
Gm4925
Arl1
Olfr1031
Olfr1030
Olfr1029
Vmn2r19
Olfr620
Olfr619
Vmn1r251
Vmn1r241
Gm16445
Arhgap18
Armcx1
Heatr5a
Umad1
Olfr284
Fbxw18
Crhr2
Myh14
Gdap1
Slc43a1
Timm10
Senp8
Myo9a
Lhx5
Dcaf10
Msantd2
Mmp25
Glis2
Hic2
Col6a6
Saraf
Leprotl1
Tpm1
Mtfr1l
Epha10
Abhd17a
Klf16
Dcaf5
Tmbim6
Abr
Ipmk
Zfp263
Lfng
Mroh7
Fam151a
Nupr1
Rnf220
Mettl4
Stx11
Commd1
Zrsr1
E030018B13Rik
Hip1
Zfp936
Pigz
Ncbp2
0610012G03Rik
Obi1
Creb1
Spin2d
Anapc15
Coq10b
Hbp1
Awat2
Gm7714
Gabarapl1
Zscan4b
Rbm7
Gm5617
Mstn
Mat1a
Colec10
Arl13a
Cox6c
Itih5
Vmn1r13
Olfr850
Krtap3-3
Krtap3-2
Krtap3-1
A930009A15Rik
Map3k20
Csn1s2a
Hipk3
Rexo2
Zfp641
Rnf180
Retnlb
Olfr285
Olfr257
Olfr1537
Adgrg4
A630073D07Rik
Tmigd1
Ccdc73
Bcas3
Zfp748
Frat1
G3bp2
Klhl29
Dgat1
Tyw1
Sbds
Cbx7
Psrc1
Pou4f3
Xpnpep1
Bptf
Slx1b
Bola2
Per2
Tmem125
Asb6
Twist1
Slc18b1
Rps12
Seh1l
Tfap4
Melk
Pold4
Dmtn
Nbeal1
Usp2
C1qtnf5
Sgpp1
Mfrp
Macroh2a2
Fermt3
Fgf22
Fezf1
Fam227b
Dtwd1
Prl3c1
Dnah7b
Cyp26a1
Ncor1
Zfp143
Guf1
Tcim
Dnajb14
Zscan4f
Scrt1
Ncam1
Pnpla8
Clk1
Zdhhc3
Exosc7
Igll1
Sncaip
Elk4
Ypel2
Med26
N4bp2l2
Trappc3l
Mlf2
Zeb2
Klhdc7a
Tmem249
Slc52a2
Fbxl6
Calhm4
Olfr421-ps1
Ptprr
Ndufb3
Fam126b
Polr1d
Lnx2
Olfr420
Zcchc13
Dennd11
Zfp994
Ccdc130
Elavl2
Ptprm
Pramel19
Olfr805
Olfr594
Gar1
Cfi
Vmn2r12
Slc3a1
Cwh43
Zfp820
Yipf7
Ropn1
Perm1
Gm4836
Gm14819
Gm14632
Gm10487
Gm10486
Gm10230
Gm10147
Gm10096
Gm10058
Eogt
Eda2r
Cpa3
Cd200r1
Bnip3l
Laptm4b
Gm11487
Pml
Tnfrsf9
Med15
Nrg1
Ube2q2
Fis1
Pcbp1
Kcnt1
Zfp148
Ccsap
Nqo2
Wipi1
Nudt18
Ctf2
Mrap
2510009E07Rik
Kdm3b
Fam222a
Ergic1
Card11
Rnf223
Zfp945
Rtkn2
Satb2
Adipor2
Psma4
AY074887
Elovl3
Lrrc4
Nfil3
Mapk13
Lrfn1
Dpep2
Ctsz
Tubb1
Tet2
Npepps
Zfp324
Rpl35a
Lmln
Iqcg
Trappc2l
Galns
Smim13
Cd164l2
H2-Q4
Rbks
Babam2
Tmem43
Chchd4
Ipo11
Dimt1
Hmox2
Taar6
Taar7a
Smarca5
Slc25a5
Adk
Opa1
Klf1
Epha4
Timm8a2
Serbp1
Zfp850
Atf2
Akap1
Gcdh
Sec61a1
Ndufs3
Kbtbd4
Susd1
Chd1l
Gcnt1
Mid1
Luzp4
Tmem108
Hexim2
Slc45a2
Nudt7
Inhba
Gpr35
Vmn2r42
Cenpi
Serpinb6a
Chst3
Slc34a1
Fam193a
Ttc27
Taar7b
Olfr99
H2-M3
Cyp2c67
Gm14595
Gm14590
Flrt2
Abcb1b
Ghrl
Olfr281
Snurf
Ins2
Igf2
Lratd1
Disc1
Vmn1r167
Olfr482
Calb2
Vmn2r60
Mark2
Plac1
Trpa1
Zik1
Vmn2r6
Usp17le
Tex13c3
Spata46
Shoc1
Sh3kbp1
Scel
Pnma3
Pla1a
Otud7a
Osbpl3
Olfr1331
Mybpc1
Mamld1
Klra9
Klk5
Hdgfl1
Gm7694
Glrb
Fzd3
Cst8
Cd48
C1qtnf4
Abca15
2010106E10Rik
Nrf1
Sspn
Cd1d2
Ambra1
Zfp607a
Cd1d1
Mta3
Ppfibp2
Rad18
Ccdc166
Extl3
Rsl24d1
Zan
Epo
Mapk15
Pim3
Lamc3
AW549877
Stk32b
Bag2
Meis3
Mrpl15
Slc5a3
Mrps6
Taco1
C2cd5
Cdc20b
Sco1
Adprm
Gpx8
Slc28a3
Acvr1b
Syt12
Slc35f3
Ubp1
Cdyl2
Gm10639
Coa4
Mppe1
Espl1
Zhx2
Tubd1
Rps6kb1
Spag17
Sprr2b
Gm5414
Ces1e
Gpatch1
Ice1
Snapc1
Tacstd2
Dnah2
Ell3
Rarb
Ddx17
Ndufaf4
Olfr1454
Xrcc1
Pinlyp
Polrmt
Mdm4
Drd4
Pik3c2b
Styxl1
Mdh2
Rnf125
Slc39a7
Rxrb
H2-Ke6
Col11a2
Ky
Rplp2
Slc25a22
Pidd1
Kif26a
Denr
Mcl1
Nek2
Fyco1
Tmem267
Letmd1
Rbm39
Pdgfrb
Cdx1
H2ap
H2al3
Eef2
Dapk3
Rasl10b
Supt5
Zfp566
Zfp260
Med1
Cdk12
Hpx
Marchf3
H3c8
Tex14
Jund
Slc15a1
Iqcn
H4c8
H2ac10
Slc7a15
H2bc6
Pibf1
Dis3
Eapp
Gm525
Arl4d
Fbxw7
Akirin2
Rad23a
Calr
Cdv3
Ube2s
Bmpr1b
H3c10
H2bc13
H2ac13
Oxnad1
Dph3
Adgra2
H4c3
H1f6
H1f3
Tmem231
Gabarapl2
H3c2
H2ac4
Kcnk5
Efnb3
Tmem33
Plekhb1
H4c2
H4c1
H3c1
Camk2n1
H4c6
H3c7
H2bc9
Hivep3
H3c3
H2bc3
H4c4
H3c4
Aqp3
Ints3
Uri1
BC107364
Tmem181a
H2bc7
H2ac7
Trim29
Ccdc171
Socs3
H1f2
Gpx4
Znfx1
Clec2g
Zfhx2
Thtpa
Fubp3
Tomm5
Bbs1
Gnb5
H3c6
H2bc8
H2ac8
Xbp1
Mtf2
H4c11
H2bc12
H2ac12
Olfr180
Unk
H3f3b
Maneal
Tm7sf3
Med21
Rdm1
H4c9
H2bc11
H2ac11
Prdx6
LOC666331
Gm11634
Ilf2
Hoxb13
Zbtb4
Slc35g3
Polr2a
Taf13
Ttc39d
Bcl2a1a
Mkrn1
Bcl2a1b
Abca3
Ovol2
Fitm2
H1f1
Cmip
Mycn
Abca17
Agpat5
Notch4
Creb3l3
Cdk15
Tmem191c
Tfrc
Ier5
H2bc14
Rpgrip1
Cxcl1
Bmerb1
H3c11
H2bc22
H2ac22
H1f5
Rhobtb1
A930033H14Rik
Pspn
Clpp
Alkbh7
Oaz2
Adcy5
Adam5
Srp14
Trim7
Poldip3
Nudt4
P4ha3
Hspa8
1700037H04Rik
Taf4
Bcl2a1d
Tmem18
Dennd2c
H3c15
H3c14
H2ac19
H2ac18
Klf2
Plbd2
H4bc24
H2bc23
H2ac24
H2ac23
Prxl2b
Gramd1b
Dpagt1
Kat7
Cyth4
Ier2
Vgll2
Tm2d2
Adam9
Usp25
Hoxb4
Xylb
Sub1
H4c14
H3c13
H2bc18
Clcn4
H4c18
Capns1
Mtnr1a
Brwd1
Ing1
Cars2
Ksr1
Foxp1
Rnf19b
Ect2
Trib3
Eif4a2
H4f16
H2aj
Lag3
Ifitm7
Ucp2
Trpm3
Hspa5
Enpp4
Tmem131l
Taf12
Gmeb1
Kcnj16
Mettl14
Malt1
Prkdc
Mcm4
Fndc3b
Ints6
Fam24b
Fam24a
Cuzd1
Pom121l2
Cidea
Gm36210
Snai1
Fbxo44
Fbxo2
Nabp1
Rnf13
Tcp11
Rcc1
Fhl1
Cd44
Ccin
Ap3s2
Mreg
Tll1
Tnfsfm13
Tnfsf12
Srsf3
H2bc21
H2ac21
H2ac20
Baz1b
Mafa
H2bc4
H2ac6
Xpo1
Extl1
Tal2
Dlg4
Acadvl
Hmbs
H2ax
Golga7
Bcat2
Gja4
Akap8l
Slc13a2
Mdga1
Cic
H4c17
Bmt2
Galnt2
Habp2
Sertad2
Pmepa1
Gtpbp4
Fcgr4
Ttpal
Evi5
Adgre5
Foxo3
Sgf29
Lasp1
Itga5
Gtf2a1
Unc93a2
Gstp2
Gstp1
Hjurp
A730008H23Rik
Kng2
Rarg
Rab34
Proca1
Mrps2
1700007K13Rik
Nfyb
Eif4b
Arrdc2
H1f4
Rgs18
Fbxo6
Ncmap
Klf4
Wdtc1
Hsp90aa1
Ppp3r1
Hnrnpab
Fam53c
Cdc25c
Tctex1d4
Plk3
Btbd19
Tmem50a
Syf2
Rsrp1
Tmem167b
Phf5a
Aco2
Rph3al
Psmd12
Plekha7
Pitpnc1
Dppa2
Nodal
Btg2
Smc3
Sumo1
Mphosph9
2810006K23Rik
Rusc1
Nfrkb
Abcc12
Asph
Map10
Rrn3
Grasp
Cnn3
Nufip2
Zbtb37
Rab7
H4c12
H2bc15
H2ac15
Angptl8
Ei24
Trim17
H3f4
Nop58
Tob1
Hoxb5
Ccdc92b
Sfi1
Eif4enif1
Jarid2
Rab37
Slc2a9
Cpa1
Smyd2
Npffr2
Gm3448
Gm3417
Arf4
Cited2
Nudt1
Sp8
Hspb8
Zdhhc12
Pkn3