ChIP-Atlas: Target genes

Potential target genes for Rfx1

Query protein: Rfx1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX027337 | mESC derived neural cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Rfx1's Target genes

◢ Rfx1: Average

◢ SRX7671902: Embryonic brains

◢ SRX7671903: Embryonic brains

◣ SRX027337: mESC derived neural cells

◢ SRX1161944: MIN6B1

◢ Rfx1: STRING

Pofut2
Ube2o
Sik3
Pafah1b2
Rfx1
Zdhhc1
Jund
Fam227b
Dtwd1
Azin2
2900026A02Rik
Dpy19l1
Ncoa5
Mks1
1700030J22Rik
Ccdc30
Traf3ip1
Xrcc1
Pinlyp
Mthfr
Clcn6
Wdr34
Dnttip1
Mycbp
Dynll1
Sik1
Lrrc73
Acap2
Foxj1
Tsga10
3110082I17Rik
Abi2
Smpd2
Ppil6
Anks3
4930451G09Rik
Ssbp2
Sde2
Wdfy1
Cfap298
Pigx
Cep19
Chd4
Pkig
Gar1
Hsdl1
Dnaaf1
Ppp1r16a
Ankrd13d
Map6
Dyrk1b
E4f1
Map1a
Cenpf
Wdr90
Mafa
Prkar1b
Dnaaf5
Mafg
Jam3
Srek1
Dnajc25
H1f10
Dyrk3
Ufsp2
1700029J07Rik
Meig1
Rundc1
Ptges3l
Klf2
Saxo2
Efl1
Zfp36l2
Sdcbp
Ctxn1
Zc3h3
Dffb
Cep104
Rabl2
Pold3
Fam214a
Cetn4
Bbs12
Dyrk1a
Agtrap
Rhbdd2
Dagla
Ccdc57
Wdr78
Mier1
Fank1
Dhx32
Fam131a
Oxnad1
Dph3
Pak4
Nudt2
Kif24
Eif2b2
Nup50
Cyp46a1
Naa40
Samd4b
Gmfg
Tnpo1
Ing1
Phf20
Sfi1
Mok
Marchf8
Zfp523
Dner
Stk32c
Lrrc27
Lsm10
Tecpr2
Cinp
Arl4a
Elmod2
Ttc21a
Gorasp1
Rtca
Pnma1
Rap2a
Ccno
Tmx4
Iqce
Tctex1d2
Cdc37
Ropn1l
Npcd
Cbx6
Ccar2
Leng8
Tmem237
Msmo1
Wdr27
1600012H06Rik
Ift57
Nek11
Aste1
Sec61a2
Ywhaz
Fasn
Ccdc74a
Ptdss2
E2f8
Dixdc1
Zfp24
Tmem107
Mark3
Ift22
Ccdc34
Ccdc181
Kif18a
Mpc2
Dcaf6
Ankfy1
Gnaz
Stx2
Lrrc10b
Hmgn2
Armc9
Wdr60
Sf3a1
Ccdc157
Ehd1
Spcs1
Glt8d1
Per1
Ywhae
Cacfd1
Cep112
Odf2
Thbs3
Mtx1
Pnkd
Mapre3
Ap1m1
Cabin1
Lrrc56
Hras
Ubxn6
Ankrd54
Ogfod2
Mast3
Pcgf1
Pkd1
Klf10
Dnajc1
Odc1
Mindy4
Taok2
Cnpy3
Nsmce1
Katnal1
Lmna
Dhx16
Tada2b
Ccdc96
Rab11fip2
Dennd2a
Rfc5
Trit1
Otub1
Cars
Bub1
9530077C05Rik
Rnf141
Gtf3c1
D430042O09Rik
Adgra1
Crnkl1
Cfap61
Mapre2
Zfp688
Ubxn2b
Cfap20
Pyroxd1
D5Ertd579e
Intu
Map3k12
Rgl1
Arpc5
Ywhaq
Tbc1d32
Akirin1
Morn2
Dhx57
Tubgcp3
Trip12
Fbxo36
Dmwd
Rer1
Morn1
Afg1l
Ahi1
Adgb
Spata6
Hspa4l
Irak1bp1
Igsf9
Prr7
Cfap410
Erf
Dcp1b
Tfip11
Gtf2e2
Abhd2
Fbxw7
Txndc17
Ssx2ip
Pds5b
Arl6
Xpr1
Nap1l1
Cdc14a
Eaf2
Vps13a
Ppp5c
Eri3
Dnaja1
Eml1
Zfp653
Igsf11
Klhl7
Tent5c
Fam204a
Dalrd3
Kif23
Dnajc16
Klf4
Lyrm4
Fars2
Mlec
Ubn2
1700037H04Rik
Tpm3
Sclt1
D3Ertd751e
Bdp1
Csnk1g2
Celf3
Zfyve28
Cfap99
Lca5l
Gdpgp1
Cib1
Rrp7a
Spata24
Knop1
Iqck
Capn10
Lins1
Spice1
Chrm4
Ift81
Repin1
Fam222a
Rpgrip1l
Fto
Skiv2l
Nelfe
Dnal1
Ttll13
Hat1
B9d2
Ubxn11
Kiz
Brd3os
Rpn1
Cdca4
Iqch
Aagab
Ccdc102a
Tsr1
Sgsm2
Ccdc184
Gnl2
Med9
Bbs5
Cfap74
Tmem209
Ssmem1
Stk11ip
Shq1
Nek2
Snx13
Spata7
Stxbp4
Cox11
Tent4a
Chchd6
Hspa12a
Eno4
Ipo4
Cep162
Lmbrd1
Stox1
Gcc2
Ap1s1
Plxnb2
Dstn
Dhx30
Rfx2
Eif2s1
Atp6v1d
Acox3
Cherp
Tsnaxip1
Ranbp10
Hsph1
Msi1
Tspan3
Slc25a3
Sec22c
Eif4a3
Sfxn2
Arl3
Casp6
Trim37
Mrps9
Spata33
Chmp1a
Trim39
Ccpg1os
Ccpg1
Sirt3
Psmd13
Zfp664
Ccdc92
Ttll5
Erg28
Akap11
Negr1
Tmem53
Armh1
Stk35
Phc1
Cplane2
Arf3
Cdk4
Tmtc3
Cep290
Sys1
Nucb2
Ankef1
Oxld1
Ccdc137
Dmxl2
Mpc1
Tsen2
Pomt2
Gstz1
Efhc1
Sun3
Gm11992
Rnf139
Cnot10
Galnt2
Cfap69
Foxn2
Eif5
Orai2
Ralgapa1
Rpl30
Nbas
Ppm1g
Nek4
Nphp1
2610524H06Rik
Trim36
Nbr1
Brca1
Nemp1
Tmem260
Prkar2b
Cbx5
Poll
Dpcd
Mtmr6
Sppl2b
Lsm7
Ptges2
Gm1673
Spout1
Tmem231
Plec
Rfc1
Ip6k2
2610301B20Rik
Rsph1
Nme7
Blzf1
Prkar1a
Cdkl3
Wdr31
Tomm7
Cfap43
Zc3h14
Prr3
Gnl1
Cep43
Arhgap39
Snrpd2
Qpctl
Pold2
Cluap1
1700037C18Rik
P4ha1
Slf1
2210408I21Rik
Dnajc10
Nr2f6
Fam161a
Togaram1
Klhl28
Josd2
Cacng4
Kif3b
Fam81a
Tedc1
Smc6
Gen1
Gmppb
Ppm1e
Ccdc13
Micos10
Tasp1
Naga
Tor3a
Cep135
Hmgcr
Tagap1
Neurl4
2810408A11Rik
Spg21
Pgam1
Wdr35
Sertad3
Arfip1
Rab36
Trim9
Gpn3
Fam216a
Tbc1d19
Tctn2
Nsdhl
Cetn2
Bbs7
Zswim1
Creld2
Alg12
Ddx41
Ift88
Otud3
Dnah9
Dag1
Ptpro
Klhl18
Kif9
Chmp4b
Mbd4
Ift122
Ccnc
Safb
Safb2
Clba1
Ica1l
Prepl
Camkmt
Prkcsh
Ccdc151
Tmem250-ps
Arl2bp
Dusp18
4921536K21Rik
Pitpna
Naa35
Entpd7
Alms1
Cipc
Tex9
Ptpn13
Cog7
Syt5
Fsd1l
Lrguk
Brms1
Gde1
Ndufaf6
Ndc1
Map9
Cep128
Spaca9
Ak8
Fam90a1b
Apoo
Inpp4a
Sipa1l1
Kndc1
Bclaf1
Gatd1
U2af2
E2f5
Rap1gap
Ngef
Agbl3
Stx18
Prkaa1
Cep126
Trub2
Cfap36
Kif6
Xrra1
Spcs2
Ntm
Sec16a
Cibar1
Ubr7
Gon7
Gm20604
Tmem17
Ttll4
Tctn3
Entpd1
Vps35
Neurl1a
Get1
Tmem216
Ubl3
Pfn2
Lyst
Cox20
Psmc3ip
Slc35a1
Dusp6
Rsph14
Mrpl10
Lrrc46
Eef2kmt
Ptpn1
Enkd1
4933405L10Rik
Tapbp
Calm2
Lmln
Wdr54
1700003E16Rik
Fzr1
Hsp90aa1
Usp30
Lpin2
Ddr1
Dync2li1
Rtl5
B9d1
Ccdc126
Bloc1s1
Ring1
Dnal4
Fam110a
Stk19
Dxo
Rnf5
Sec14l1
Chn1
Rlf
Kif3a
Wdr7
Kifbp
Cdk2ap2
Fam219a
Dnaic1
Yipf5
Ddx20
Mlf1
Copb2
Fam160a2
Ndufab1
Rpf2
Pgs1
Phc2
Rpgr
Slc25a46
1700113H08Rik
Cacybp
Fbxl2
Agbl4
Zscan18
Kifc3
Ip6k1
Mrpl39
Slc4a8
Braf
Opcml
Sdccag8
Cep170
Bola1
Baiap2
Lyrm1
Dcun1d3
Dym
Ddx24
Erich2
Ankrd42
Mgat1
Klhdc10
Fam167a
Rhpn1
Usp20
BC005624
Tulp3
Tusc3
D230025D16Rik
Timm13
Dnajb2
Cystm1
Qsox2
Nipbl
Hcn4
Cmtr2
Yipf3
Polr1c
Dph6
Pnmal2
Uhrf1
Oscp1
Mib2
Tmem64
Ap3d1
Zswim2
Mapkbp1
Pik3r2
Timm21
Fbxo15
Itsn1
Cryzl1
Mrpl58
Pick1
Rab28
Ttll1
Usp29
Peg3
Trdmt1
Clcn4
Pltp
Pcyt1a
4930453N24Rik
Znhit2
Ndufaf4
Prmt5
Gpr137
Bad
Axdnd1
Syt17
Bbs9
Fndc11
Ttc25
Gabarapl2
Eif4g3
Tgfbrap1
AI597479
Slc25a14
Traf3
Bbs2
Meak7
Edem3
Prdm4
Trim24
Ube4b
Ebna1bp2
Cfap57
Tmem167b
Btbd9
Fanci
Aopep
Sema4b
Sypl
Ttc13
Arv1
Spata2
Rnf114
Bud13
Mex3c
Ncs1
Rasal2
Cxxc1
Tnfrsf19
Nabp2
Dnah10
Ercc6l2
Unc119b
Cpd
Tubb4b
Fbxw9
Cops3
Derl1
Cmss1
Arid4a
Dhx37
Scamp1
Wdr19
Dynlt1b
Zbtb48
Pgap3
Tmem43
Chchd4
Pemt
Bbs1
Polr2f
1700088E04Rik
Cfap221
Pak1ip1
Fbrs
Cfap299
Slc35a2
Id1
Fbxl14
Etfbkmt
Cfap58
Pm20d2
Fth1
Ptpn4
Vwa3b
Rnf182
Crem
Papola
Wrap53
Trp53
Lpcat4
H13
Gemin8
Mocs3
Dpm1
Lrriq3
Fpgt
Usp6nl
Gtf2f1
Wars2
Phtf1
Poc1b
Galnt4
Camk2a
1500009L16Rik
Gfpt2
Zfp287
Oaz2
Ppt2
Gmfb
Plch1
Fgr
Ndufs5
Lmtk3
Adsl
Cebpb
Zfp280c
Spats1
Marchf10
Rufy2
Cemip2
Pacsin1
Ulk4
Ppme1
C2cd3
Xpnpep3
St13
Nphp4
Kcnab2
Pcm1
Rexo1
Galk1
Ppp1r7
Pask
Nsmf
Mzf1
Smg7
Cfap46
Gas8
Crip2
Tbl1xr1
Rfc2
Dnajc27
Selenof
Hs2st1
Rpl35
Parp8
Glb1l2
Ift74
Styxl1
Mdh2
Gtf3c4
Sf3b5
Gpr135
Morn4
Dennd4a
Sqle
Pcnx4
Trim33
Ddx59
Dis3l2
Fam174a
Bcl2l1
Jun
Naa20
Fam98b
Arhgap19
Ptpra
Tollip
Stk16
Glb1l
Mfn1
Cnnm2
Hgs
Arl16
Mtf1
Dlx2
Atp1a1
Dipk2a
Rab3ip
Cplane1
Cbx8
Nubpl
Atf2
Wdr48
Tube1
Fam229b
Tpt1
Nr4a3
Fbf1
Xylb
Cep120
Zfp768
Gm12500
Ampd2
Tnks
Cfap206
Fnip2
Elp1
Abitram
Lrrc6
Snx24
Tbcel
Arf2
Ccnb1
Gna11
Ift43
Zc2hc1a
Pkp4
Ccdc148
Gtf2ird2
Rnf11
Lca5
Cibar2
Usp42
Tcp11
Sh3gl3
Phldb1
Tmem9
Zdhhc23
Camsap1
D630045J12Rik
Kif17
Thada
Hnrnpf
Foxo6
Cpeb2
Lman2l
Cenpj
Rspry1
Psme3ip1
Dnajc30
Bud23
Plin5
Trim2
Hspbp1
Celf6
Usp21
Rtn1
Traf4
Spag1
Ttll3
Dnah11
Whrn
Slc43a2
Nagk
Rbks
Babam2
Rsph3a
Etfrf1
Casc1
Zeb1
Rpl22l1
Tbc1d16
Ccdc40
Lcorl
Zmynd10
Qtrt1
Taf11
Ttc26
Ap2a1
Sap18b
Sap18
Rae1
Senp6
Mul1
Ccdc138
Arl8a
Cdk9
Actr1b
Ddx55
Sf3b4
Naa30
Cfap54
Txlna
Tusc2
Ap2s1
Magi1
Dop1a
Cyth2
Asb1
Kctd17
Zbtb11
Mns1
Ccdc134
Snrpg
Psma5
Bdh1
Hrob
4930505A04Rik
Rnf32
Sik2
Nav2
Abhd17b
1110059E24Rik
Enox1
Shisa7
Plxnb1
Pakap
Tdp1
Efcab11
Ufm1
Spire2
Atr
1700065D16Rik
Matk
Dcdc2a
1810009A15Rik
Chpf2
Setd4
Abl1
Msl3
Tacr1
Pum1
Gatad1
Ireb2
Ddi2
Iqsec1
Phactr4
Tex26