ChIP-Atlas: Target genes

Potential target genes for Cdk9

Query protein: Cdk9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: Cdk9 | Average
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Cdk9's Target genes

◣ Cdk9: Average

◢ SRX104410: ES cells

◢ SRX236483: ES cells

◢ SRX020971: Macrophages

◢ SRX020972: Macrophages

◢ SRX020973: Macrophages

◢ SRX020974: Macrophages

◢ SRX1550527: Macrophages

◢ SRX1550528: Macrophages

◢ SRX255482: MEF

◢ SRX277329: MEL

◢ SRX3200439: mESC derived haemogenic endothelium

◢ SRX3200440: mESC derived haemogenic endothelium

◢ SRX3200441: mESC derived haemogenic endothelium

◢ SRX620286: NIH/3T3

◢ SRX620287: NIH/3T3

◢ SRX620288: NIH/3T3

◢ SRX620289: NIH/3T3

◢ SRX735308: Th1 Cells

◢ SRX735309: Th1 Cells

◢ SRX735310: Th2 Cells

◢ SRX735282: Unclassified

◢ SRX735292: Unclassified

◢ Cdk9: STRING

Sspn
Fyco1
Pgk1
Tmem267
Vmn2r4
Scrib
Calcoco1
Oasl1
H3c6
H3c14
H3c15
H2ac19
H2ac18
Actb
9430015G10Rik
Clcn4
Rptor
Mrpl44
Gm3448
Gm3417
Rpl3
Chac1
Errfi1
Snx17
Eif2b4
Sfi1
Gtf3c6
Ap1g1
H1f2
Ubc
Nabp1
Hspa5
Ddx23
Eapp
Prcc
Cnot1
Dync1i2
Rps29
Phf12
Banp
H4c14
H2bc21
H2ac21
H2ac20
Actg1
H2bc18
H3c13
Opa1
9030025P20Rik
H3f3b
Cpsf1
Aaas
Mcl1
Tex14
Nr4a1
Gm3435
Srsf2
Mfsd11
Ifrd1
Nedd8
Gmpr2
Arntl
Ddx5
Cep95
H4c11
Dusp2
Cltc
Tmed2
Phb
Pprc1
H4f16
Trp53rkb
Ep400
H2bc12
H2ac12
Eef1a1
Calm1
Atf4
Tbcd
Tcte3
Sepsecs
H1f4
Ermard
Usp48
Mettl25
Ccdc59
Chmp6
Mrpl19
H3c7
Egr1
Mtg1
Ccn1
Ncln
H4c3
H2bc6
Znfx1
H3c11
Nme1
Tpm1
Sp1
H1f3
H3c2
Sharpin
Maf1
H2bc13
H2ac13
Unk
Kif2c
Dusp1
Ctnnb1
Phlda1
Gm13285
Pknox1
Nop14
Grk4
Ap2m1
Ndufs7
Rps20
Ube2j2
Htra2
Aup1
Poldip3
Ndufaf5
Esf1
Krr1
Wdr70
Crtc2
Mrpl39
Gm13290
Gm13289
Chmp4b
Atf6
H2ax
Ifrd2
Dcp1a
Polr2a
Med6
Mtf2
Eif2b5
Dhx33
Crebl2
H3c3
Tti2
Pigu
Drg2
Btg1
Cenps
Dnttip2
Dhx16
Atp5o
H2bc4
H2ac6
Arl14ep
Ufl1
Smg8
Ncbp2
0610012G03Rik
Fus
Tsfm
Mterf1b
Fastkd1
Cdkn2aipnl
Hspa8
Hsph1
H4c4
Sec61a1
Rdm1
Snx18
Ndufa9
Zc3h6
Naa38
Cyb5d1
Dmap1
Thbs1
Fam227b
Dtwd1
H2bc15
H2ac15
Get1
Tmem168
Med23
Ubxn1
Get4
Flad1
Tob1
N4bp2l2
Ndufs4
Prdx1
Fitm2
Serpine1
Sass6
Lrrc59
Mterf1a
Tab1
Retsat
Elmod3
Rbl2
Zdhhc1
Pold3
Ifng
H4bc24
H2bc23
H2ac24
H2ac23
Zfp637
Cotl1
Ier2
Eif4a2
Usp5
Cdca3
Psmd7
Mff
Ttc4
Rhot1
Mat2a
Psmd3
Snrpc
Zcwpw2
Pcbp1
Azi2
Sde2
Kpnb1
Gtf2b
Rplp0
Nfat5
Hnrnpa2b1
Cbx3
Dffb
Cep104
Dnajc16
Proser1
Nhlrc3
Junb
Sphk2
Rpl18
Tsnaxip1
Ranbp10
Dpy19l4
Btrc
Rad54l2
Uspl1
H4c18
Ccn2
H3c10
Mtmr10
Ptgs2
Fbxl18
Terf2
Zfand5
Odc1
Ccnl1
Napepld
Anapc5
H3c4
Gatb
Med27
Mapkapk5
Rpp30
Nup153
Bud13
Timm13
Ndufs3
Kbtbd4
Eif4e2
Rab33b
Pigq
H2bc14
Snx5
Mgme1
Ddit4
Tmem101
Gm13288
Cox6c
Ppia
Gpn3
Fam216a
Ndufb8
Insig1
B4galt7
Slc39a13
Rbm39
5730455P16Rik
Mrpl21
Ighmbp2
Slc33a1
Nup54
Rbm17
Clptm1l
Snrpd3
Gucd1
Palb2
Dctn5
Cul2
Clpb
Adpgk
Tob2
Eif5
Ccl1
Galk2
Cluh
Cops2
Pole4
Gabpb2
Id3
Cirbp
Chordc1
Mmachc
Kat7
Ccdc163
Rnf123
Pcif1
Tmem11
Trmo
Rpia
Atp5g2
Nutf2
Capn15
Ier3
Ncl
Dgat1
Bod1l
Kansl2
Nuf2
Klf7
Usp30
Mapkbp1
H4c1
Srsf1
Rps3a1
Pdcd7
Fam53c
Wdr36
Epg5
Gsk3a
Ppp1r10
Ddx41
Rpl38
Ythdf2
Raf1
Psmg3
Ddb1
Vta1
Vim
Setdb1
Gmfb
Stx16
Trp53rka
Ndufc2
Mrpl1
Nelfa
Ubb
Gtf3c3
Ppp6c
Herpud1
Sdad1
H4c8
Tmed9
H2bc9
Adnp
Ska2
Prr11
Phf23
Yipf2
Timm29
H4c12
Zbtb37
Sympk
Foxa3
Btbd8
Larp4
Smarca4
St3gal2
Ulk2
Srp68
Fra10ac1
Zfyve19
Dusp5
Dnajc17
Rps19bp1
Fubp1
Dnajb4
Yars
S100pbp
Stx18
Slc38a2
Slc25a32
Dcaf13
Slc9a1
Epc1
Rubcn
Ctdp1
Zfp868
Srp19
H2ac10
Eif1
Tyw3
Snrpa1
Eif3c
Cryz
Trip4
Taco1
Fbxl15
Ccdc88a
Grcc10
Ttc41
Hsp90b1
Dis3l2
BC005537
H2bc22
H2ac22
Ccl4
Ier5
2610001J05Rik
Fem1b
Xpc
Snrpd1
Lsm3
Kbtbd7
Acp2
Gspt1
Puf60
Mrpl20
Ints12
Gstcd
Fth1
Pafah2
Dnajb12
Birc2
Psmd12
Timm50
Nfkbia
Med17
Map1lc3b
H2ac4
Trdmt1
Pbld2
Hnrnph3
Rabl6
Ankrd40
Plk2
Gm2237
Vps51
Tmem115
Snw1
Cipc
Cep128
Psat1
Irak2
H4c17
Dnajc11
Slc3a2
Jund
Klhdc4
Nufip2
Blmh
Atg16l1
Setd5
Dus1l
Mphosph10
Mcee
Klhl18
Kif9
Phf13
Faf1
Hjurp
Haspin
A730008H23Rik
Morf4l1
Armc1
Trmt44
Atad5
Zfp869
Zfp668
Zfp646
Smarcal1
Fam149b
Ecd
Pemt
Rnf7
Hsp90aa1
Tmem242
Nprl2
Cyb561d2
Eif4a1
Ube2z
Aacs
Gapdh
Sgk1
Mrps33
Mrpl35
Hnrnpab
Smn1
Luc7l
Borcs7
Top3b
Mtrex
M6pr
G3bp1
Dhx29
Tiparp
Nubp1
Ccl3
Lars
Dcps
Sfxn5
Sar1b
Tchp
Tatdn3
Nsl1
Brca2
Psmb2
Flnc
Efcab2
Dcaf10
Sec22b
Knl1
Agk
Scnm1
Lysmd1
Tspan4
Snrpe
Frg2f1
Foxj3
Srsf5
Tarbp2
Mvk
Mmab
Inpp5k
Rprd2
Suz12
Ppip5k2
Gin1
Ccdc77
Mrps15
Pole3
4933430I17Rik
Lamtor5
Tuba1b
B9d1
Pdss2
Dus2
Ddx28
Rps8
Rdh14
Chrac1
Atp6v1h
Brf1
Snrnp27
Esyt2
Arfgap2
Dhx30
Tmem123
Rel
Ube3c
Tpt1
Pfdn5
Ahcyl1
Map2k2
Zfp846
Katnb1
Eps15
N6amt1
Eci1
Adprhl2
Zfp189
Rps12
Pten
Mrpl50
Hsp90ab1
Usp31
Ptbp1
Pop7
Tmem214
Ankle2
Slc35b4
Nfyc
Zfp963
Slbp
Ppp1r11
Eif3a
Bicd2
Invs
H3c8
Erp44
Cct4
H3c1
Secisbp2
Scfd1
P4ha1
Acer3
Hnrnph1
Cep63
Anapc13
Cct8
Txnl1
Kmt2a
Ikzf5
Cwc22
Atad2
Acadsb
Ddit3
Dnajb1
9530077C05Rik
Rpl5
Gid8
Dido1
H2bc11
H2ac11
Chchd6
Bub3
Urgcp
Tnf
Rpl27
Pcbp2
Zfp36l1
Trmt10a
Tmem43
Mttp
Gm13275
Chchd4
Arl8b
Snapc2
Mrpl12
Eefsec
Scaf1
Rsrp1
Ormdl3
Aasdh
Commd2
Bms1
Polr2m
Kmt2d
Mis12
Gm13279
Gm13278
Derl2
Rabac1
H4c9
Dnaja1
Srek1
Txn1
Pomp
Rad50
Pcnp
Nfe2l2
G3bp2
Rab1a
Clcn7
Med4
Vps18
Mrpl58
Cog7
Ccp110
Sp2
Tbck
Aimp1
Trib3
Hexim2
Gtpbp2
Cstf1
Aurka
Rpl13
Hus1
Pex3
Adat2
Zfpl1
Hdhd3
Cdca5
Hps5
Gtf2h1
Gm13287
Csgalnact2
Tmem248
Polr2l
Exosc6
Ssbp1
Il2
Cbwd1
Taf11
Phf20l1
Pabpc1
Mrps18b
Ube2g1
Zfp866
Rpl10a
Zc3hc1
Alg1
Uchl5
Ro60
Cnpy3
Cnot10
Arid1a
Mtres1
Cdca4
Slc39a3
Nsrp1
Kctd5
Srcap
Prmt6
Nsa2
Mt2
Gtf2a1
Gfm2
Kpna6
Utp3
R3hcc1l
Gpatch8
C87436
Csf1
Eef1akmt4-ece2
Eef1akmt4
Ddx56
Alg3
Tbc1d7
Slc27a4
Rbm33
Pcna
Fntb
Rgl2
Orc5
Sppl2a
Pum3
Hnrnpa1
Cbx5
Riok1
Mtmr2
Cited2
Cage1
Sf3a3
Psmd9
Epn1
Rbm34
Ccpg1os
Ccpg1
Ubqln4
Lamtor2
Clec16a
Selenot
Rps21
Rab5if
Mmaa
Klhl20
Cops8
2700062C07Rik
Zc3h10
Wdr4
Ppp1r7
Pask
Ippk
Gid4
2210016L21Rik
Tmem94
Rbm25
Rps6
Rab5c
Fbxo15
Trib1
Cdk12
Gtf2h3
Eif2b1
Prkaca
Vrk1
Thrap3
Thg1l
Mmadhc
Gadd45g
Mnd1
Coq5
Cdk7
Wdr43
Pigl
Ncor1
Golga4
Ube4a
Ap5s1
Wnk1
Rtcb
Cutc
Cox15
Taf5
Lonp1
Catsperd
Ap4e1
Wbp2
Nsfl1c
Gatad2b
Thoc1
Hmgcr
Fam193a
Sesn1
Cwc27
Rangap1
Plag1
Nip7
Cog8
Chchd7
Wdr25
Wars
Stk25
Vegfa
Washc4
Tbc1d14
Mrpl30
Mitd1
Ift22
Calm2
Trpc4ap
Nudcd1
Eny2
Wdr61
Ctu1
Mapk1ip1l
H2bc8
H2ac8
Pnrc1
Man1b1
Kat6a
Cdc16
Trrap
Fmnl3
Ciao3
Adprh
Stk32c
Lrrc27
Frmd6
Trmt5
Tle1
Timm21
Slc38a6
Tubb4b
Rpl41
Ldha
Brwd1
Ndufa10
Mthfd2
Zfp143
Pip5k1a
Man2b2
Tefm
Mrps2
Rcc1l
H2bc1
H2ac1
Cdk5rap2
Arid4b
Togaram1
Rps23
Pex11b
Klhl28
Zfp738
Tmem39a
Enc1
Zfyve1
Rps27rt
Rps27
Rab13
Pofut2
Lsm6
Gtf2f2
Atad3a
Stau1
Jtb
Smg5
Ints4
Gfus
Exoc2
Ranbp2
Ptpa
Crat
Ndufb5
Mrpl47
Cdiptos
Cdipt
Zfp729a
Mettl9
Gne
Commd9
Utp14b
Lrp6
Acsl3
Rnaset2b
Pkm
Ttc13
Rabggtb
Ints2
Arv1
Zfp959
Sp4
Clcn3
Isy1
Cdc42
Wdr45b
Tor1aip2
Tor1aip1
Ints9
Hmbox1
Sec13
Ints5
Pcnt
Kmt2e
Wdr11
Napg
Ifnz
Raly
Nop16
Higd2a
Txnip
Ppil4
Gale
Birc5
Sike1
Secisbp2l
Npm1
Nsmce4a
Ccdc57
Dars
Atf1
Alkbh8
Wdr5
Tut7
Maz
Hnrnpu
Cops7a
Ints14
Zfp119b
Wbp4
Nepro
Ipo7
Elf1
Zc3h18
Srsf6
P4hb
Mis18bp1
Erc1
Tmem245
Bbs5
Ywhae
Yars2
Vps72
Rnaset2a
Ncbp3
Them4
Jak2
Zfp949
Vdac2
Aars2
Rpl30
Pa2g4
H4c2
Bola3
Zfpm1
Raver1
Ppih
Mrps31
Zfp706
Tuba1a
Timm22
Tardbp
Spg11
Sf3b2
Ddx1
Snx27
Cnot2
Vcpip1
Rraga
Rad18
Leng8
Exoc7
Vcl
Ubox5
Fastkd5
Slc16a1
Med7
Hinfp
H2bc7
H2ac7
Guf1
Max
Hddc2
Gpx1
Trir
Taf4
Dhx8
Wrap53
Trp53
Rnpc3
Otud7b
Nol10
Mtif3
Zfp809
Ppil3
Nif3l1
Plaa
Noct
Birc6
Ube2g2
Cox19
Caap1
Rgs1
Slc35a1