ChIP-Atlas: Target genes

Potential target genes for Rfx1

Query protein: Rfx1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX7671903 | Embryonic brains
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Rfx1's Target genes

◢ Rfx1: Average

◢ SRX7671902: Embryonic brains

◣ SRX7671903: Embryonic brains

◢ SRX027337: mESC derived neural cells

◢ SRX1161944: MIN6B1

◢ Rfx1: STRING

Tmx4
Orai3
Pin1
Fam227b
Dtwd1
1700094D03Rik
Dad1
Abhd4
Sema4b
Eaf2
Dusp18
4921536K21Rik
Ttll10
Ccdc30
Cfap298
Dnajc16
Mapre3
Klhl18
Kif9
Xrcc1
Pinlyp
Tecpr2
Cinp
Tctn2
Ebna1bp2
Cfap57
Trim2
Lrrc56
Hras
Fam204a
Thnsl1
Enkur
Lins1
Kifbp
Mks1
Ccdc13
E4f1
Hydin
Wdr90
Mok
Zc3h3
Rlf
1110051M20Rik
Rsph1
Foxj1
Fam131a
1700030J22Rik
Ropn1l
Micos10
Etfrf1
Casc1
Zswim1
Mthfr
Clcn6
Tctex1d2
Syt5
Ppp2r1a
Pifo
Ubn2
Rfx1
Tmem9
Efcab1
Ak1
3110082I17Rik
Map9
Cfap20
Cep112
Cdk2ap2
Josd2
Lrriq1
Mink1
Tmem138
Cyb561a3
Lsm10
Anks3
4930451G09Rik
Tmem209
Ssmem1
Cfap65
Cfap54
Rtca
Gcc2
Itsn1
Cryzl1
Rusf1
Cabin1
2410004P03Rik
Usp30
Sde2
Iqca
Ubxn6
Kti12
Ssbp2
Etfbkmt
Ccdc39
Alkbh5
Ttll3
Maats1
Stoml2
Ccdc57
Dnajc10
Cfap74
Klhdc9
Ccdc181
Chchd3
Mfsd4b4
B9d1
Rfx3
Dmwd
Prdm4
Mafa
Bbs5
Tekt4
Gar1
Dnaaf3
Mindy4
Lrrc23
Prkcsh
Ccdc151
Mib2
9530077C05Rik
Jam3
Sipa1l1
Rundc1
Ptges3l
Smg7
Gm973
Fez1
Cenpf
Katnal2
Bbs1
Dync2h1
Dcun1d5
Spef2
B9d2
Cyp46a1
Dyrk1a
Eif2b2
Crocc2
Nek2
Zdhhc1
Tmem167b
Lrrc6
Tada2b
Ccdc96
Arl6
Kif6
Efcab12
Pnma1
Mycbp
U2af2
Cfap44
Pigx
Cep19
Saxo2
Efl1
Ap1s1
Tsnaxip1
Ranbp10
Fam214a
Lrrc49
Qtrt2
Ccdc191
Prepl
Camkmt
Plch1
Pold3
Oxnad1
Dph3
Rnf40
Ccdc189
Eif2s1
Atp6v1d
Tubgcp3
Smpd2
Ppil6
Wdr27
1600012H06Rik
Ufsp2
1700029J07Rik
Pofut2
Ccdc34
Otub1
Znhit1
Plod3
Prkar1b
Dnaaf5
Bdp1
Dyrk1b
Tube1
Fam229b
Rpl30
Fbxw7
Jund
Ncoa5
Nme7
Blzf1
Gtf2f1
Psmc3ip
Prmt5
Nucb2
Cplane2
Pak1ip1
Rpl35a
Iqcg
Wdr7
Nsmce1
Map1a
Wdr78
Mier1
Tpm3
Mrpl10
Lrrc46
Fam98b
Pak4
Gpr19
Catip
Ttc41
Hsp90b1
Rer1
Morn1
Mocs3
Dpm1
Sf3a1
Ccdc157
Gtf3c1
D430042O09Rik
Ptges2
Rhpn1
Lrriq4
Lrrc34
Mbd4
Ift122
Trit1
Rpgrip1l
Fto
Mapre2
Nup50
Spout1
Sf3b5
Wdr31
Ptdss2
Wdr34
AI429214
Tmem108
Morn2
Dhx57
Pik3r2
Ankrd13d
Fanci
Sun3
Gm11992
Mark3
Ccpg1os
Ccpg1
Timm10
Stk32c
Lrrc27
Cep162
Churc1
Irak1bp1
Sertad3
Csnk1g2
Dync2li1
Tmem219
Hmgcr
Ift22
Myo10
Oscp1
Sgta
Dnajc7
Pold2
Cyth2
Mapk10
Akap11
Agbl3
Setd4
Ralgapa1
Cmtr2
Ccdc65
Ywhae
Hspbp1
Cfap161
E2f8
Gm12500
Ampd2
Rpf2
Lrrc73
Dlg4
Ift57
Dcp1b
Crnkl1
Cfap61
Lrguk
Fam151b
Ehd1
Actr6
Gde1
Dusp6
Rrp12
Naga
Hsdl1
Dnaaf1
Copz1
Pcgf1
Dynlt1b
Cenpj
Bbs9
Odf2
Ap3d1
Dym
Mast3
Tomm7
Slc25a46
Psma5
Ttll9
Cfap69
Tpgs1
Stk11ip
Kif18a
Sirt3
Psmd13
Armc9
Cherp
Snrpd2
Qpctl
Spats1
4930505A04Rik
Klhdc10
Ccdc113
Cbx5
Acap2
Cdk4
Lman2l
1700010I14Rik
Lyrm4
Fars2
Trip4
Csnk1g1
Iqsec1
Fam183b
Plin5
Kmt5c
Meig1
Ubxn11
Ywhaq
Arf3
Dnajc1
Ddx24
Mrpl58
Tfip11
Eif4a3
Cetn4
Bbs12
Pomt2
Gstz1
Msi1
Agtrap
Arid4a
Brms1
Slc9a8
Mns1
Efhc1
Adgb
Spef1l
Pick1
Ap2a1
Dnah9
Rnf141
Pcsk1n
Zbtb48
Nat14
Leng8
Tdrp
Shq1
Kdm4a
Cfap36
Rnf5
Tsga10
Zfp287
Rsph4a
Dnttip1
Phc2
Rabl2
Ndufs5
Sdccag8
Cep170
Gpn3
Fam216a
Tspyl4
Mpc2
Dcaf6
Ptpn13
Taok2
Ddx41
Mlf1
Derl1
Ing1
Mlec
Mtmr6
Myg1
Rfc5
Pltp
Txndc17
Dusp3
Map7
Dynll1
Poll
Dpcd
Ankrd54
Spag1
Zswim2
Drc1
Mapk15
Smc6
Gen1
Gtf2e2
Cfap221
Cdkl4
Tmem218
Nek11
Aste1
Per1
Zc2hc1c
Acyp1
Rps6kc1
Wdfy1
Dlec1
Pef1
Ttc27
Lmna
Fam227a
Cby1
Tasp1
Mlc1
Rpn1
Spg21
Fzr1
Stxbp4
Cox11
Zfp24
Hsph1
Map6
Asb1
Rab36
Kcnip3
Ap1m1
Prr3
Gnl1
Galk2
Cops2
Cdkl1
Igsf9
P4ha1
Tex9
Nme5
Dnah7a
Spata7
Cfap97d2
Ttc30b
Fsip1
Fndc11
Glipr1l1
Ubxn10
Pla2g2c
Ccar2
Ccno
Ttc26
Tm4sf1
Bloc1s1
Ubxn2b
Slc27a1
Saraf
Ndufa8
Morn5
Cenph
Spata17
Gpatch2
Adam22
Wdr54
1700003E16Rik
Tmem107
Sik3
Pafah1b2
Ankef1
Mrpl39
Tob1
Tedc1
Trip12
Fbxo36
Zfp719
Nsdhl
Cetn2
Stx8
Cfap52
Tmem237
D230025D16Rik
Wdr17
Pspc1
Ube2o
Nudc
Spice1
Cog7
Rpp38
Prr7
Ccdc158
Ttll1
Mypop
Slc25a3
Mrpl22
Tmem89
Trub2
Abl1
Fam47e
Morn4
Pbx4
Peli1
Qars
Nbr1
Brca1
Rsph14
Atf6
Hspa12a
Eno4
Ccdc126
Sfi1
Acox3
Spata24
Samd4b
Gmfg
Capn10
Thbs3
Mtx1
A930007A09Rik
Stpg1
Nipal3
Coq8b
Chd4
Marchf10
Tbcel
Ctxn1
Ppm1e
Ccdc180
Map3k19
Spata18
Abhd2
Pcnx4
Fbxo16
Pex11g
Sik1
Epb41l4a
Zfp688
Ift27
Sorbs2
Efcab2
Tmem95
Ipo4
Cluap1
1700037C18Rik
Cipc
Cfap43
Glipr1l3
Tbc1d32
Meak7
Yeats2
Slc25a14
Prkar1a
Gemin8
Cdkl3
Cfap46
Parp8
Ccdc170
Aopep
Dnah11
Ccnc
Mrps9
Tufm
Slc22a12
Sec61a2
Armc3
Sybu
Tmem231
Dhx40
Brat1
Neurl4
2810408A11Rik
D130043K22Rik
Mgat1
Arfip1
Zfp512
Spag6l
Spef1
Otud5
Fam76a
Mief2
Dnajc27
Denn2b
Foxo6
Chchd6
H1f10
Ift81
Pkp4
Ccdc148
Cep164
Knop1
Iqck
Dalrd3
Ttll13
Evi5l
Fam185a
Ccdc146
Glis3
Ccdc184
Ccdc107
Mul1
Med31
4930563E22Rik
Dnajc24
Xylb
Klf2
Syt10
Psmd8
Kntc1
Elmod1
Cfap20dc
Ankfy1
Ip6k2
Nsmf
Katnal1
Rab28
Fbf1
Prkn
Pacrg
Rpl35
Tuba1a
Dnajc15
Dynlt1f
Dynlt1c
Azin2
Mzf1
Wdr93
Pex11a
Igsf11
Ppm1g
Adgra1
Copb2
Actr1a
Jun
Dixdc1
Shoc2
Bbip1
Brd3os
Aspm
Casp6
Kif23
Hspa2
Ruvbl1
Map3k12
Faap24
Cfap73
Wwox
Zfp386
Zmynd10
Efcab6
Hspa1l
Hspa1a
Dnaja1
Tmtc3
Cep290
Ulk4
Usf1
Nap1l1
Ccdc138
Sec16a
Dnajc25
Sec23b
Cd82
Zbed5
Calm2
Nmb
Wdr35
Tapbp
Marchf8
Wdr13
Myadm
Prkdc
Mcm4
Fig4
Ak9
Glb1l2
Ift52
Sclt1
D3Ertd751e
Stk35
Nacad
Rap2a
Pibf1
Dis3
Pard6b
Ddx39b
Togaram1
Klhl28
Slc25a18
Mtr
Vwa3b
Cars
Coq3
Daw1
Cep128
Iqcc
Dnal4
Dnajb2
Mtmr14
Atp1a1
Wdr19
Klhl21
Sdcbp
Trp53rkb
Shank3
Ccdc102a
Tmem17
Spns1
Ap2b1
1700037H04Rik
Sem1
Ap3m2
Rhbdd2
Ppp1r32
Lrrc51
Prr18
Fank1
Dhx32
Ccdc162
Ift172
Fam161b
Coq6
Wdr60
1700028P14Rik
Med9
Btrc
Fkbpl
Dcaf12
Intu
Clec3b
Tekt1
Rtl5
Trp53bp1
Cdc14a
Timm21
Fbxo15
Afg1l
Tent5c
Get1
Dsel
Zfp407
Mex3c
Zfp819
Elmod2
Wdtc1
Zfp523
Tom1l2
Drc3
Dnaaf2
Hipk1
Uvrag
Rsph9
Ttc25
Dennd2a
Nqo1
Map3k14
Smpd3
1700016K19Rik
Bola1
Dpy19l2
Sfxn2
Arl3
Cwf19l2
Lix1
Timm13
Cfap77
Edem3
Cnpy3
Rps27rt
Rps27
Rab13
Casd1
Enkd1
4933405L10Rik
Ppil4
Tubb4b
Spop
Lpin2
Dctn3
Sec22c
Tor3a
Usp29
Peg3
Nudt2
Kif24
Tmem8b
Fam221b
Tmed10
Pgap3
Ttc21a
Gorasp1
AU041133
Hat1
Zmat2
Gnl2
Slc4a8
Tnfaip1
Ift20
Ppp1r16a
Spata2
Rnf114
Eri3
Stx18
Lekr1
Bclaf1
Lca5
Fam161a
Pnp
Tbc1d31
Styxl1
Mdh2
Ino80e
Hirip3
Jakmip2
Bub1
Ttf1
Ccdc121
Zeb1
Cdca4
Qtrt1
Bbs7
Ecrg4
Ptpn4
Paqr7
Net1
Gpr137
Bad
Hpcal4
Atat1
Oaz2
Iqce
Kiz
Rin1
Tnks1bp1
Rtl6
Ano3
Rab11b
Ywhaz
Tm9sf4
Scn3b
Actr1b
Lrif1
Nfe2l1
Itgb3bp
Efcab7
Zfp433
Gm32687
Lca5l
Hsp90aa1
Stub1
Prpf19
Trp53rka
Mtf1
Pds5b
Mfsd4b1
Mterf4
Btbd17
Eftud2
Ccdc103
Prelp
Spaca9
Ak8
Ubl3
Safb
Safb2
Arrdc4
Srsf1
Spata6
Nek4
4930453N24Rik
Cdc37
Spcs1
Glt8d1
Kcne1l
Braf
Slf1
2210408I21Rik
Tom1l1
Ttc12
Phf20
Elapor1
1700013F07Rik
Ankfn1
Plec
Fam90a1b
Apoo
Arl8a
Ttc34
Smc1b
Polr3h
Wbp11
BC049715
Tcp11
Entpd7
Myo1e
Cnot10
Get3
Dtna
Marchf3
Smarcad1
Gtf3c5
Tsen2
Tctn3
Entpd1
Naa40
Pin4
Map3k6
Drc7
Lmtk3
Fbxw9
Bud13
Fbl
Camk2a
Phactr4
1810020O05Rik
Zfp446
Whrn
Zc3h10
Pcf11
Cfap157
Celf3
Wars2
Tgfbrap1
AI597479
Cystm1
Trim39
Fuz
Cops4
Abhd17b
1110059E24Rik
Cand1
Igbp1
Erich6
Cacfd1
Orai2
Rpl22l1
Ccnb2
Fbxo31
Sap18b
Sap18
Gbf1
Zbtb5
1700024G13Rik
Pou2f1
Srfbp1
Cfap410
Gpkow
Kcnj16
Cfap58
Dipk2a
Ttc29
Yipf3
Polr1c
Tmem67
Clasp2
Ptpn21
Msmo1
Xrra1
Spcs2
2610301B20Rik
Rpl24
4430402I18Rik
Spag8
Rrp7a
Pdxp
Usp20
BC005624
Clcn4
Cfap70
Dnal1
Nicn1
Senp1
Pfkm
Ppp5c
Fasn
Gdpgp1
Cib1
Zdhhc23
Pde4b
Dynlrb2
Tbc1d19
Dhx16
Cxxc1
Zfp715
Fgr
Ptcd2