ChIP-Atlas: Target genes

Potential target genes for Rfx1

Query protein: Rfx1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1161944 | MIN6B1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Rfx1's Target genes

◢ Rfx1: Average

◢ SRX7671902: Embryonic brains

◢ SRX7671903: Embryonic brains

◢ SRX027337: mESC derived neural cells

◣ SRX1161944: MIN6B1

◢ Rfx1: STRING

Gcc2
Mks1
Ccdc65
Poll
Dpcd
Ccdc39
Dync2li1
Ebna1bp2
Cfap57
Saxo2
Efl1
Tctex1d2
Lman2l
Dnttip1
1110051M20Rik
Acox3
Rrp12
Stxbp4
Cox11
Ttll10
Cenpf
Pin1
Dync2h1
Dcun1d5
Wdr34
Mapk10
Nsmce1
Ralgapa1
E4f1
Wdr27
1600012H06Rik
Tmem138
Cyb561a3
Ubn2
Usp30
Akap11
Pifo
Fsip1
Gar1
Ywhaq
Micos10
Ropn1l
Enkd1
4933405L10Rik
Trim2
Rhpn1
Wdr90
Pcgf5
Mib2
Bbs1
Rlf
Kifbp
Shq1
Tube1
Fam229b
1700010I14Rik
Cog7
Sf3b5
Slc25a14
Prdm4
Etfbkmt
Stk32c
Lrrc27
Jam3
Acap2
Aopep
Tecpr2
Cinp
Sgta
Fndc11
Eaf2
Zdhhc1
Fanci
Tmx4
Meig1
Fam131a
Hydin
Pold3
Spout1
Sik1
Dym
Dad1
Abhd4
Sik3
Pafah1b2
Nacad
B9d1
Tmem9
Ccdc34
Ccdc57
Syt5
Cfap44
Pnma1
Etfrf1
Casc1
Tasp1
Map7
Prkar1b
Dnaaf5
Alkbh5
Asb1
Casp6
Nek11
Aste1
Eif2s1
Atp6v1d
Tmem209
Ssmem1
Ptdss2
Cyp46a1
Dcp1b
Cplane2
Lmna
Rnf141
Rtca
Rpl35a
Iqcg
Cars
Ehd1
Wdr31
Oscp1
Myg1
9530077C05Rik
Ccdc181
Oxnad1
Dph3
Spef1
Rfx3
Irak1bp1
Lsm10
Ipo4
Ddx41
Fam227b
Dtwd1
Cetn4
Bbs12
Ift22
Wdr7
Cfap65
Mafa
Pik3r2
Foxj1
Ddx24
Actr6
Chchd6
Ttc30b
Ttll1
Bbs9
Tbcel
Rpf2
Zc2hc1c
Acyp1
4930505A04Rik
Tspyl4
3110082I17Rik
Rundc1
Ptges3l
Tbc1d19
Thnsl1
Enkur
Mfsd4b4
Zswim1
Marchf8
Spats1
Dyrk1b
Ufsp2
1700029J07Rik
Nme5
Arl6
Fam151b
Smg7
Zc3h3
Spag1
Ccno
Maats1
Pcsk1n
Cwf19l2
Cxxc1
Klhl18
Kif9
Mrpl10
Lrrc46
Zfp287
Lrguk
Tsnaxip1
Ranbp10
Dnajc25
Copz1
Mark3
Nek2
Prepl
Camkmt
Sipa1l1
Cdc37
Prkcsh
Ccdc151
Ap1s1
Spef1l
Igsf11
Rnf32
Lrrc73
Dusp18
4921536K21Rik
Pcgf1
Smpd2
Ppil6
Iqsec1
Rtl5
Uvrag
Fbxw7
Dnajc10
Rpl30
Pds5b
Tctn2
H1f10
AI429214
Btrc
Tekt4
Rer1
Morn1
Zfp719
Ubxn2b
Gtf2f1
Stx8
Cfap52
Ptges2
Lrif1
Rfc5
Agtrap
Trub2
Ctnna2
Tmem167b
Slf1
2210408I21Rik
Hnf4a
Ndufs5
Dlec1
Kif18a
Galk2
Cops2
Ttll9
Cnot10
Fam183b
Klhdc10
Ncald
Hsdl1
Dnaaf1
D130043K22Rik
Tex9
Kif3b
Lrriq3
Fpgt
Arid4a
Dusp3
Ssbp2
Ift172
Tmed8
Samd15
Sde2
Chchd3
Psmc3ip
Orai3
Tob1
Wdtc1
Mrps9
Fbxw9
Actr1a
Gas8
Ap3d1
Ppp2r1a
Psmd8
Otub1
Naa20
Iqank1
Fam83h
Gtf3c1
D430042O09Rik
Tfip11
Siah1b
Wdfy1
Leng8
Timm10
Ttc21a
Gorasp1
Ccdc126
Sema4b
Apbb1
Cenpj
1700016K19Rik
Lmtk3
Dynll1
Lca5l
Ahi1
Wdr17
Sf3a1
Ccdc157
Capn10
Derl1
1700019D03Rik
Rfx1
Celf3
Denn2b
Sirt3
Psmd13
A930007A09Rik
Arf3
Ubxn11
Map1a
Lrrc6
Fam204a
Samd4b
Gmfg
Pofut2
Ppp1r7
Pask
Cdk4
Pole3
4933430I17Rik
Wdr60
Cabin1
Nap1l1
Usp29
Peg3
Rsph4a
Jund
Armc9
Ube2o
Gemin8
Rpn1
Gtf2e2
Psma5
Cenph
Elmod2
Znhit1
Plod3
Itsn1
Cryzl1
Tsga10
Nphp1
Churc1
Ift57
Fbf1
Ankef1
D5Ertd579e
Rnf5
Tmem237
Fam214a
2610028H24Rik
Trip4
Csnk1g1
Rfx5
Mycbp
Cfap73
Ak1
Rhbdd2
Msmo1
Eif2b2
Dnah9
Ankrd42
Ncoa5
Bbs5
Pold2
Katnal2
Wdpcp
Mdh1
Cherp
Rtl6
Timm13
Plch1
Mtmr6
Lrrc49
Map9
Matk
Fam234a
Ubxn6
Qtrt2
Ccdc191
Rpl24
Sec22c
Fkbpl
Ift43
Faap24
Togaram1
Klhl28
E2f8
Pick1
Gck
Bdp1
Cfap36
Copb2
Mrpl22
Mlf1
Mypop
Mocs3
Dpm1
Nqo1
Ift88
Glipr1l3
Cfap126
Iqch
Aagab
Mapre3
Cep112
Efcab1
Tmem231
Nucb2
Odc1
Eftud2
Ccdc103
Adgb
Hspa12a
Eno4
Qtrt1
Atf6
Mafg
Morn2
Dhx57
Stk16
Glb1l
Dagla
Cnpy3
Otud5
Nme7
Blzf1
Polr2f
1700088E04Rik
Sorbs2
Spice1
Slc25a46
Rrp7a
Slc27a1
Rsph9
Fam98b
Lrrc56
Hras
Trit1
Rpgrip1l
Fto
Mapre2
Mink1
Xrcc1
Pinlyp
Srfbp1
Polr3h
Wdr78
Mier1
Alms1
Nubpl
Hmgcr
Yeats2
Map3k12
Crnkl1
Cfap61
Tdrp
Mok
Prkn
Pacrg
Cfap70
Ttc26
Wwox
Nbr1
Brca1
Dyrk1a
Dnajc1
Klhdc9
Brms1
Dnah11
Mpp2
Rgl1
Arpc5
Fbxo16
Mfsd4b1
Nudc
Spata2
Rnf114
Cfap69
Glipr1l1
Cfap20
B9d2
Srp72
Per1
Nudt2
Kif24
Ctxn1
Cfl1
Tom1l2
Drc3
Efhc1
Tada2b
Ccdc96
Mzf1
Dusp6
Lins1
Map3k14
Spata7
Hmgn2
Prr3
Gnl1
Nsdhl
Cetn2
Rabl2
Tubgcp3
Jakmip2
Efcab12
Cldn9
Traf3ip1
U2af2
Pnmal1
Ccpg1os
Ccpg1
Nat14
Prr7
Zkscan7
Apba1
Taok2
Pomt2
Gstz1
Cdk2ap2
Spata24
Foxo6
Ccdc184
Tmem218
Zeb1
Skiv2l
Nelfe
Pigx
Cep19
Slc25a3
Dyrk3
Prkar1a
Mindy4
Pak1ip1
Ttc25
Siva1
Cystm1
Usp2
Ccdc30
Ankrd13d
Dctn1
Cops3
Ccdc107
Ankmy1
Zfp688
Dmwd
Rfc1
Odf2
Csnk1g2
Wdr19
Clcn3
Setd4
Rpp38
Gmppb
Ccs
Ccdc87
Sdccag8
Cep170
Cfap77
Cep162
Agbl3
Rsph1
Tpgs1
Cmtr2
Spg21
Azin2
Stk11ip
Dpy19l1
Kntc1
Pcf11
Mthfr
Clcn6
Micos13
Kif23
Cep295nl
Rps3
Ppp1r16a
Zfp24
Btbd8
Glb1l2
Phactr1
Ywhaz
P4ha1
Mlec
Rfx2
Lyrm4
Fars2
Anks3
4930451G09Rik
Erf
Tmem184c
Abi1
Ppm1e
Smpd3
Nup50
Mbd4
Ift122
Fam161a
Tmem216
Pef1
Ift81
Naa40
Zbtb48
Zfp446
Spata6
Akr1e1
Kcnip3
Pnp
Rnf40
Ccdc189
Trp53bp1
Dnajc16
Sclt1
D3Ertd751e
Pik3r4
Gm12500
Ampd2
Pspc1
Brd3os
Clba1
Pkp4
Ccdc148
Wdr93
Pex11a
Cfap54
Cfap157
Sec61a2
Sec16a
Sdcbp
Rpl22l1
Meak7
Prmt5
Cfap298
Tcp11
Pacrgl
Cibar2
Dnajc24
Ankrd37
Rap2a
Kiz
Rsph14
Tmem107
Med9
Ogfod2
Snrpd2
Qpctl
Morn4
Zfyve28
Cfap99
Saraf
Cyth2
Dnajb2
Gtf3c4
Fzr1
Tex26
Arfgap2
Katnal1
Spata17
Gpatch2
Ndufa8
Morn5
Dnajc15
Arfip1
Cerkl
Tm9sf4
Armc4
Tbc1d32
Plp2
Cipc
Pcnx4
Igbp1
Ube2u
Knop1
Iqck
Tpm3
Gpsm1
Wdr35
Gng4
Tbc1d16
Ccdc40
1700030J22Rik
Fig4
Ak9
Zbtb40
Msh5
Snrpf
Txndc17
Kmt5c
Kti12
Ift74
Smim5
Gde1
Mfn1
Cluap1
1700037C18Rik
Ing1
Pih1d2
Nkapd1
Chd4
Hat1
Wdr13
Tmed10
Mgat1
Mapk15
Josd2
Ttf1
Zbed5
Xrra1
Spcs2
Zfp523
Fbxo31
Eif4a3
Atp1a1
Tsen2
Zdhhc23
Ect2
Abcg2
Phc2
Cdkl2
Smarcad1
Fam120b
Phf20
Arl13b
Cfap410
Mul1
Tctn3
Entpd1
Tomm7
Klhl7
Dnal4
Shoc2
Bbip1
Hsph1
Lekr1
Plin5
Apobec4
Nfe2l1
Thop1
Gnl2
Arl2bp
Pkig
Srsf1
Map6
Gm35549
Ap1m1
Ap2a1
Qars
Pak4
Zfp184
Cmip
Rab28
Aspm
Stoml2
Gpn3
Fam216a
Peli1
E2f5
Chrm4
Gpr137
Bad
Rae1
Iqca
Dnal1
H13
Ankrd45
Strn4
Fkrp
Ubl3
Tuba1a
Rfc2
Eef2kmt
Sun3
Gm11992
Ttc16
Ptrh1
Ap3m2
Chpf2
Bub1
Wars2
Dalrd3
Wiz
Ppt2
Rilpl2
2900026A02Rik
Ap2b1
Ift27
Rptor
Plec
Whrn
Gnaz
Trim39
Iqce
Thg1l
Nav2
Mcm7
Ap4m1
Zbtb5
Cabcoco1
Intu
Camk2a
Dnaaf2
Sppl2b
Lsm7
Nol4
Cdkl1
Tedc1
Hspa4l
Tufm
Trim37
Ddx39b
Cdc14a
Otud3
Tent5c
Ssx2ip
Spns1
Gpkow
Dynlt1b
Znrf1
Rab36
Fam227a
Cby1
Tex46
Trip12
Fbxo36
Smc6
Gen1
Zc3h10
Drc1
Tmem95
Tmem53
Armh1
Tmtc3
Cep290
Arrdc4
Slc9a8
Akap13
Mical3
Gm5640
Celf6
Msi1
Get3
Igsf9
Tent4a
Fam167a
Fank1
Dhx32
Gm14685
Tulp3
Zfp386
Ttll5
Erg28
Ufm1
Stk36
Rnf25
Myt1l
Rbfox2
Usp20
BC005624
4930453N24Rik
Svip
Elapor1
1700013F07Rik
Cldn23
Evi5l
Neurl4
2810408A11Rik
Cpd
Dcaf12
Atf2
Entpd5
Bbof1
Trmt44
Mpc2
Dcaf6
Tmem29
Tnpo1
Oxld1
Ccdc137
Pex11g
Slc4a8
Zfp715
Afg1l
Fam90a1b
Apoo
Ccdc138
Abl1
1700007K13Rik
Pfkfb2
Cacfd1
Pbx4
Brwd3
Six2
Orai2
Zfp512
Dhx40
Zbtb14
Cfap74
Elmo2
Cfap46
Cacybp
Nicn1
Get1
Ttll4
Mns1
Cfap20dc
Fmn1
Eif2d
Ube4b
Bbs7
Kdm4a
Zfp687
Sfxn2
Arl3
Jun
Rph3al
Fyco1
Dynlt1f
Dynlt1c
Dmxl2
Dctn3
Katnb1
Fech
Ulk4
Fam219a
Dnaic1
Dnajc27
Ift52
Fgd4
Fam174a
Zbtb6
Hnrnph2
Gla
Smim22
Dnaaf3
Arf2
Tppp3
Ccnb2
Net1
Spata33
Chmp1a
Poli
Ankrd54
Fuz
Lrrc23
Ndufa13
Ppp1r32
Ttll13
Repin1
Senp1
Pfkm
Efhb
Dcaf15
Camsap1
Glrx5
Efcab10
Mtr
Fbxl2
Ndufaf4
Fam161b
Coq6
Elp1
Abitram
Crip2
Cdk20
Iqcc
Fam76a
Tmem67
Nsmf
Steap1
Pak6
Ptpn13
Eif5
Kcnip2
Ppp1r15b
Coq8b
Mrpl39
Rab11fip2
AU041133
Coq3
Dnaja1
Sertad3
Slc35a2
Nek4
Calm2
Ppm1g
Rasal2
Tnks
Zscan22
Zfp46
Tsga10ip
Parp8
Stk19
Dxo
Phospho2
Ccdc173
Mast3
Dipk2a
Wdr47
Gtf2ird2
Polr3f
Dzank1
Kirrel2