ChIP-Atlas: Target genes

Potential target genes for Rfx1

Query protein: Rfx1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: Rfx1 | Average
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Rfx1's Target genes

◣ Rfx1: Average

◢ SRX7671902: Embryonic brains

◢ SRX7671903: Embryonic brains

◢ SRX027337: mESC derived neural cells

◢ SRX1161944: MIN6B1

◢ Rfx1: STRING

Cnih2
Fam227b
Dtwd1
Tmx4
Mks1
Xrcc1
Pinlyp
Ccdc30
Pofut2
Rfx1
Cfap298
Wdr90
Foxj1
E4f1
3110082I17Rik
Mthfr
Clcn6
Tctex1d2
1700030J22Rik
Zdhhc1
Wdr34
Tecpr2
Cinp
Ssbp2
Fam131a
Zc3h3
Jund
Iqcn
Gar1
Jam3
Mapre3
Rundc1
Ptges3l
Cenpf
Sde2
Saxo2
Efl1
Lsm10
Ncoa5
Lrrc56
Hras
Muc1
Anks3
4930451G09Rik
Ccdc57
Ropn1l
Eaf2
Mok
Rtca
Dbt
Pigx
Cep19
Sik3
Pafah1b2
Smpd2
Ppil6
Dnajc16
Casp9
Mycbp
Ufsp2
1700029J07Rik
Wfdc3
Dnttip1
Mafa
Map1a
Prkar1b
Kdelr3
Dnaaf5
Dyrk1b
Ccdc181
Lrrc73
Oxnad1
Dph3
Cyp46a1
Eif2b2
Pnma1
Acap2
Fam204a
Fam214a
Pin1
Ube2o
Ubn2
Cfap20
Pold3
Dyrk1a
Cep112
Stk32c
Lrrc27
Dynll1
Dusp18
4921536K21Rik
Meig1
Dclre1c
Tsga10
Cabin1
Wdr27
1600012H06Rik
Hsdl1
Dnaaf1
Ubxn6
Hdgfl2
Klhl18
Kif9
Lins1
Ift22
9530077C05Rik
Wdr66
Ccdc34
Tctn2
Ankrd13d
Tppp3
Sema4b
Mark3
Sik1
Mindy4
Cetn4
Bbs12
Tmem209
Ssmem1
Ebna1bp2
Cfap57
Ptdss2
Agtrap
Rlf
Orai3
Mettl15
Kif18a
Ovca2
Nup50
Hic1
Arl6
Cfl1
Wdr78
Mier1
Pak4
Micos10
Rsph1
Kifbp
Otub1
Sf3a1
Nsmce1
Ccdc157
Ift57
Rer1
Morn1
Syt5
Trim2
Fos
Azin2
Wdfy1
Armc9
Kcnn1
Dmwd
Gcc2
Tada2b
Ccdc96
Fbxw7
Nek2
Ap1s1
Dcp1b
Eif2s1
Atp6v1d
Bbs5
Map9
Dnajc10
Zswim1
Ywhaq
Usp30
Serf1
Bdp1
Gtf3c1
D430042O09Rik
Nek11
Aste1
Irak1bp1
Samd4b
Gmfg
Trit1
Ccno
Cplane2
Gdf1
Cers1
Rabl2
Dad1
Abhd4
Tsnaxip1
Ranbp10
Leng8
Ehd1
Map6
Morn2
Dhx57
Pcgf1
Rnf141
Ing1
Cars2
Mib2
B9d2
H1f10
Arrdc3
B9d1
Dnajc1
E2f8
1110051M20Rik
Marchf8
Chd4
Mapre2
Akap11
Prkcsh
Ccdc151
Tmem9
Rpl30
Pitpnm1
Cdk2ap2
Tubgcp3
Odf2
Csnk1g2
Per1
Traf3ip1
Stxbp4
Cox11
Dnajc25
Prepl
Camkmt
Mapk8ip1
Shq1
Rpgrip1l
Fto
Ubxn2b
Prdm4
Josd2
Aspdh
Spout1
Sdcbp
Etfrf1
Casc1
Cfap74
Adgb
Tox2
Tmem237
Nme7
Blzf1
Ctxn1
Sipa1l1
Ptges2
Cep162
Ppp1r16a
Foxh1
Etfbkmt
Bbs1
Crnkl1
Cfap61
Mpc2
Dcaf6
Cherp
Wdr31
Traf3
Ralgapa1
Mast3
Tfip11
Taok2
Elmod2
Rfc5
Lmna
Ttll10
Rhbdd2
Ccpg1os
Ccpg1
Ccdc39
Tpm3
Smg7
Dync2li1
Zfp24
Sec61a2
Lyrm4
Fars2
Ppp2r1a
Itsn1
Cryzl1
Thnsl1
Enkur
Mink1
Mafg
Usp2
Nucb2
Tmem167b
Rpn1
Ttc21a
Oscp1
Gorasp1
Txndc17
4933427D14Rik
Sirt3
Psmd13
Nudt2
Kif24
Gtf2e2
Acox3
Tmem107
Marchf9
Cdk4
Ywhae
Pifo
Mbd4
Ift122
Hmgcr
Pold2
Capn10
Ubxn11
Mrpl10
Mlec
Lrrc46
Stk11ip
Fanci
Fank1
Dhx32
Lrguk
Hydin
Tmem138
Cyb561a3
Poll
Dpcd
Tube1
Fam229b
Cars
Dync2h1
Dcun1d5
Cfap65
Rhpn1
Agbl3
Rap2a
Psmc3ip
U2af2
Ccdc106
Cdc37
Wdr7
Zfp688
Igsf11
Zfp523
Rara
Crocc
Igsf9
Iqce
Brat1
Ankef1
Tbc1d32
Katnal2
Hspa12a
Eno4
Dagla
Gstt2
Wdr60
Ap1m1
Spice1
Ipo4
Cfap54
Nr1d1
Eif4a3
Sun3
Gm11992
Naa40
Rpf2
Plch1
Chchd3
2900026A02Rik
Spata7
Ak1
Ap3m2
Efhc1
Dym
Dusp6
Tasp1
Prr7
Dnah9
Cfap69
Caly
Map3k12
Sfi1
Tcea2
Sox18
Efcab1
Arf3
Ccar2
Trip12
Prmt5
Fbxo36
Dyrk3
Cfap44
Ccdc184
Asb8
Gtf2f1
Cnpy3
Klhdc9
Pkig
Cfap36
Pomt2
Maats1
Gstz1
Brms1
B4gat1
Ankrd54
Katnal1
Casp6
Hsph1
Pik3r2
Alkbh5
Lrrc6
P4ha1
Sclt1
D3Ertd751e
Spata24
Nap1l1
Mrps9
Snrpd2
Qpctl
Srf
Mtmr6
Ddx41
Msmo1
Ankfy1
Pds5b
Chchd6
Tekt4
Iqca
Gde1
Intu
Dixdc1
Klf2
Brd3os
Msi1
Pak1ip1
Bbs9
Zfp287
Dnah2
Ap3d1
Togaram1
Klhl28
Sf3b5
Ywhaz
Kif23
Tomm7
Mfsd4b4
Ift81
Slc25a3
Dpy19l1
Ccdc65
Rfx3
Cog7
Acot1
Rnf5
Agpat1
Nbr1
Brca1
Lman2l
Mocs3
Dpm1
Phf20
Trub2
Spats1
Pheta2
Naga
Stoml2
Qtrt2
Ccdc191
Ddx24
Lca5l
4930505A04Rik
Zfp36l2
Pick1
Bub1
Thbs3
Mtx1
Sdccag8
Cfap43
Cep170
Ndufaf3
Dalrd3
Knop1
Iqck
Klhdc10
Fam98b
Cmtr2
Tex9
Arid4a
Fam151b
Srek1
Mlf1
Fndc11
Slc25a46
Spsb2
Hmgn2
Ccdc13
Prr3
Gnl1
Tmem231
Med9
Rsph14
Rab36
Lrrc49
Rrp12
Celf3
Cluap1
1700037C18Rik
Slc25a14
Dffb
Cep104
Rrp7a
Tnpo1
Spg21
Rpl35a
Iqcg
Ppm1e
Parp4
Cenpj
Dnaja1
Sec22c
Cfap410
Ttll13
Nsdhl
Cetn2
Id2
Afg1l
Rgl1
Arpc5
Sertad3
Zbtb46
Derl1
Dynlt1b
Gpn3
Fam216a
Prkar1a
Ndufs5
Spag1
1700010I14Rik
Gnl2
Dlg4
Abi2
Cdc14a
Aopep
Cnot10
Ogfod2
Arl6ip4
Spata6
Slf1
2210408I21Rik
Ttll1
Cipc
Hat1
Cacfd1
Phc2
Psma5
Timm10
Smtnl1
Kiz
Setd4
Cbr1
Smc6
Gen1
Ccdc126
Abhd2
Tent5c
Zfyve28
Wdr35
Cfap99
Kti12
Fzr1
Arfip1
Trip4
Csnk1g1
Odc1
Cyth2
Crip1
Fasn
Tbcel
Kif6
Tmtc3
Cep290
Sgta
Fbf1
Copz1
Iqsec1
Zbtb48
Gm12500
Ampd2
Cldn34d
Ptpn13
Tbc1d19
Iqch
Aagab
1700094D03Rik
Znhit1
Plod3
Ahi1
AI429214
Tedc1
Spef1l
Rnf40
Ccdc189
Actr6
Ttc26
Gsg1
Fam161a
Asb1
Mapk10
Spcs1
Glt8d1
Fam183b
Psap
Plin5
Myg1
Lrg1
Enkd1
4933405L10Rik
Gnaz
Fscn2
Rtl5
Pcsk1n
Dnal1
Npcd
Cbx6
Kcnip3
Cenph
Tdrp
Dner
Ap2a1
Nmb
Zfp667
Ssc5d
Nat14
Dusp3
Cfap97d1
Usp29
Peg3
Gemin8
Neurl4
2810408A11Rik
Psmd8
Dnaaf3
Tmc3
Lrriq1
Churc1
Map7
Efcab12
1700037H04Rik
Lrrc10b
Sec16a
Sfxn2
Arl3
Dlec1
Ttc41
Tpgs1
Madcam1
Hsp90b1
Ppm1g
Dbn1
Pi4k2a
Morn4
Tsen2
Spef2
Mzf1
Adgra1
Meak7
Stx8
Cfap52
Rab28
Skiv2l
Nelfe
Copb2
Rusf1
Ccdc187
Trim39
Kif14
Ccdc74a
Ube2b
Cdkl3
Pkd1
Erf
Kmt5c
Rab11fip2
Lrrc23
Ttll9
Ip6k2
Nek4
Ttc25
Ralgds
Foxo6
Dnal4
Repin1
Gm5111
Vps13a
Tspyl4
A930007A09Rik
Pyroxd1
Spata2
Rnf114
Slc9a8
Ttc30b
Zc2hc1c
Acyp1
Rsph4a
Ttll3
Pnkd
Fsip1
Mgat1
Tmem53
Armh1
Dhx16
Plec
Cdca4
Tmem216
Fzd3
Fbxo16
Arl4a
Mns1
Ift88
Nanos2
Mypop
Kif3b
Klhl7
Orai2
Dnah11
Bbs7
Lmtk3
Fbxw9
Gmppb
Amigo3
Slc27a1
Nxnl1
Nemp1
Hspbp1
Mrpl39
Ccnc
Pcnx4
Slc4a8
D5Ertd579e
Lmbrd1
Rfx2
D230025D16Rik
Tor3a
Zswim2
Wdr54
Ppp5c
1700003E16Rik
Notch1
Mrpl22
Gemin5
Prkn
Pacrg
Nkiras2
Dnajc7
Timm13
Nudc
Mapk15
Wdr19
Rpp38
Acbd7
Sufu
Actr1a
Galk2
Cops2
Ttll5
Erg28
Ift172
Fndc4
Qtrt1
Dnajb2
A630095N17Rik
Nme5
Cystm1
Ndufa8
Morn5
Tctn3
Entpd1
Syna
Clip2
Spef1
D130043K22Rik
Glb1l2
Pkp4
Ccdc148
Get1
Glipr1l3
Caps2
Tob1
Cbx5
Cxxc1
Zbtb22
Tapbp
Fam227a
Cby1
Pef1
Chrm4
Calm2
Glipr1l1
Wdr17
Klf10
Cfap46
Mrpl58
Dstn
Atp23
Ubl3
Sgsm1
Faap24
Ccdc107
Tmem218
Oxld1
Ccdc137
Zfp719
Ankrd42
Gdpgp1
Cib1
Fam90a1b
Apoo
Aspm
Eri3
Rfc1
Cep128
Nphp1
Mtln
Junb
Hspa4l
Xrra1
Spcs2
Dennd2a
Gata2
Stk35
Dnajc24
Mul1
Fbxl16
Alms1
Wdr13
Kdm4a
Denn2b
Cwf19l2
Ppp1r7
Pask
Pbx4
Ssx2ip
Gpr137
Bad
Stx2
Lrriq3
Fpgt
Rnf32
Stox1
Eef2kmt
Lrif1
Akirin1
Zfp653
Stk16
Glb1l
Btrc
Ccdc138
Ccdc113
Ssbp4
Cfap20dc
Rtl6
Dnajc27
Stx18
Abl1
Rhobtb2
Gpr19
Atp1a1
Peli1
Mfrp
C1qtnf5
Fhad1
Lfng
Wdtc1
Kntc1
Polr2f
1700088E04Rik
Trim37
Nacad
Ift27
Wfdc1
Rdh5
Cfap73
Bloc1s1
Klhdc8b
Ccdc71
Cops3
Saraf
Crocc2
Gpsm3
Tuba1a
Ttf1
Map3k14
Gas8
Dbndd1
Uvrag
Yeats2
Spata17
Gpatch2
Smpd3
Camk2a
Ulk4
Entpd7
Morn3
Jun
Kdm6b
Nsmf
Mxd3
Fam187a
Eftud2
Ccdc103
Sppl2b
Lsm7
Gm973
2610301B20Rik
Tcp11
Cdkl1
Sorbs2
Tufm
Itpkc
Coq8b
Lekr1
Atf6
Arl2bp
1700016K19Rik
Zeb1
Phc1
Parp8
Dgkg
Dnajc15
Rpl22l1
Drc1
Xpr1
Daam1
Usp20
BC005624
Fig4
Ak9
4930453N24Rik
Jakmip2
Otud5
Matk
E2f5
Wdr93
Pex11a
Qars
Med31
4930563E22Rik
Srfbp1
Wars2
Slc6a19
Pspc1
Polr3h
Wwox
Tmem17
Nfatc1
Gnb2
Wdpcp
Mdh1
Cfap77
Safb
Safb2
Cfap97d2
Sytl3
Edem3
Rps6kc1
Fkbpl
Atf6b
Tmem219
Tbc1d16
Clba1
Ccdc40
Catip
Sptbn4
Ccdc180
Tspan3
Spaca9
Ak8
Ing2
Zdhhc23
Fam219a
Dnaic1
Dynlt1f
Dynlt1c
Cibar2
Cep164
Dhx40
H13
Trp53bp1
Tgfb3
Nfkbil1
Ift43
Ddx39b
Atp6v1g2
Kpna1
Rsph9
Pde4a
Cpd
Nqo1
Mex3c
Zfp664
Ccdc92
2610524H06Rik
Zmynd10
Shoc2