ChIP-Atlas: Target genes

Potential target genes for Rara

Query protein: Rara
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX118693 | mESC derived neural cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Rara's Target genes

◢ Rara: Average

◢ SRX3301664: Embryonic limb

◢ SRX3301665: Embryonic limb

◢ SRX018669: ES cells

◢ SRX208055: ES cells

◢ SRX208062: ES cells

◢ SRX520462: F9

◢ SRX520468: F9

◢ SRX520474: F9

◢ SRX520479: F9

◢ SRX4369776: Germline stem cells

◢ SRX4369779: Germline stem cells

◢ SRX4369782: Germline stem cells

◢ SRX4369785: Germline stem cells

◢ SRX337439: Liver

◢ SRX018670: mESC derived neural cells

◢ SRX118692: mESC derived neural cells

◣ SRX118693: mESC derived neural cells

◢ SRX675957: Th1 Cells

◢ Rara: STRING

Wwox
Abhd6
Olfr806
Tcstv3
Esr1
Fbxw7
Fam227b
Dtwd1
Nemf
Akirin2
Malt1
Rasip1
Izumo1
Tmem33
Olfr180
P4ha3
Tent5c
Znhit1
Plod3
Gcgr
Vstm4
Rps29
Ilf2
Npbwr1
Mycn
Prkdc
Gcm2
Ctnna3
Tpm2
Cd44
Kpna1
Adam5
Sacm1l
Oasl1
Trim41
Dcpp1
Olfr1168
Cdrt4
Fbxo31
Npy5r
Vgll2
Dlg4
Klf4
4930563M21Rik
Naaa
Nup153
Ssty2
Gm21242
Fam71f1
Ptgdr
Il31ra
Fam24b
Tmigd1
Rnase4
Ang
Grap
Cldn34d
Cbr3
Scn8a
Cyth4
H4c2
Trim29
H4c1
H3c1
H1f1
Rilpl2
Snrnp35
Proca1
Tgfb2
Ifna6
Crebzf
Trib3
Gja4
H4c8
H2ac10
Gucy1a2
Sspn
Pde12
Mettl14
Slc5a6
Atraid
Cad
Sumf1
Trim17
H3f4
Tmem125
Tro
Kcnn2
Cnga1
Wdr3
Ak5
Hps5
Gtf2h1
Timm22
Best2
Sbk2
Slfn4
Ccin
Zswim8
Btrc
Cyp26a1
Amotl1
Vmn2r102
Rgs18
Gm648
Adck5
Limch1
Fmc1
Harbi1
Atg13
Zfp692
Fbxo8
Cep44
Abt1
Fndc7
Rad51ap1
D6Wsu163e
Aurkb
Rara
Ccdc58
Ppp1r37
Ttf1
Gabrb3
Adamts19
Mkrn2os
Setd1a
Cfap126
Ppl
Hes7
Aloxe3
Trim58
Trpm1
Dpysl3
Dcaf5
Brpf1
Etv3l
Rrn3
Hemgn
Tbcel
Olfm5
Ccnt2
Armc8
Safb
Safb2
Rbks
Babam2
H4f16
H2aj
Npas4
Hnrnpul1
H4c4
H2bc6
Plekhb1
Exosc2
Hoxa1
Rasl10b
Asmt
Pidd1
Slc25a22
Gpatch8
Dlgap3
Calr
Ube2b
Cdkl3
Atxn2
Brox
Aida
Csf2ra
Slc15a1
Eapp
Tex14
Adgra2
H4c3
H1f6
Gabarapl2
Kcnk5
Efnb3
Rarb
H3c7
Hivep3
Sbno2
Oxnad1
Dph3
Aqp3
Ints3
Gpx4
Tmem181a
Hmox2
Atp11b
Fubp3
Znfx1
Socs3
Tomm5
H3c6
Mtf2
Cdx1
H3c2
H3f3b
Rdm1
Prdx6
Hoxb13
BC107364
Bcl2a1a
Taf13
Srsf7
Slc35g3
Polr2a
H2bc9
Bcl2a1b
Mkrn1
Tctn1
Notch4
Ifna13
Ier5
H3c3
H2bc3
Cdk15
Tmem191c
H3c8
Erdr1
H3c11
H2bc22
H2ac22
H1f5
Abl1
Pspn
Alkbh7
Brwd1
Tfrc
Bcl2a1d
Taf4
Kat7
H3c15
H3c14
H2ac19
H2ac18
Dchs2
H4c11
Klf2
Capns1
H4bc24
H2bc23
H2ac24
H2ac23
Ksr1
Ier2
Sub1
Ect2
H4c18
Poldip3
Rnf19b
Ing1
Enpp4
Jund
Iqcn
Cidea
Nek2
Taf12
H2ac4
Hspa5
Xylb
Tcp11
Rnf13
Mreg
Rhobtb1
A930033H14Rik
Cic
H4c9
H2bc11
H2ac11
Nabp1
Baz1b
Srsf3
Slc43a1
Gm20594
H3c13
H2bc18
Galnt2
Mafa
H2bc21
H2ac21
H2ac20
H2bc4
H2ac6
H2ax
Abr
Gtpbp4
Adgre5
Evi5
Ap3s2
Sgf29
Itga5
Hnrnpab
H4c17
H1f2
Bmt2
Ttpal
H2bc12
H2ac12
Foxo3
Pmepa1
H4c6
Ncmap
Gtf2a1
Nfyb
Gstp2
Nudt4
Aadacl2fm1
H1f4
Arrdc2
Creld1
Nodal
Plk3
Phf5a
Aco2
Rsrp1
H3c10
H2bc14
H2bc13
H2ac13
Smc3
Dppa2
Btg2
Cited2
Mphosph9
2810006K23Rik
Tm7sf3
Ubb
Sumo1
C1qbp
Asph
Hspa8
Foxp1
H3c4
H2bc8
H2bc7
H2ac8
H2ac7
Zbtb37
H4c12
H2bc15
H2ac15
Fam53c
Icam1
Fbxo6
Ifitm7
Bmerb1
Tob1
Arid5a
Sfi1
Arf4
Rusc1
Hspb8
Dusp9
Gm3448
Gm3417
Ints6
Stap2
Mpnd
Pitpnc1
Ttk
Pcx
Slc6a16
Cd37
Junb
Rarg
Taar7a
Porcn
Zdhhc18
Ggact
Tcte3
Gm3435
Ranbp3l
Kng2
Jarid2
Hexim1
Rab7
Gm867
Chchd10
Rpl3
Calm2
Bcar1
Ankrd39
Zfp827
Ppdpf
Atp2a2
Mtg2
Sde2
Nufip2
Rnd3
Stra8
Creb3l3
9030025P20Rik
Mybpc3
Hrh2
Rai1
Lrch4
Fbxo24
Utp14b
Acsl3
Sdha
Ccdc127
Mpp7
Sgk1
Zfp143
Nop58
Hsp90aa1
Stk3
Srsf5
Insig1
Sntb2
Rnaset2b
Capn3
Nudt1
Csrnp2
Mbd6
Ddit3
Fut8
Atg14
Haus1
Atp5a1
Ppp1r10
Mrps18b
Slc9a1
Dnajb9
Uck1
Rnaset2a
Pbld2
Hnrnph3
Tsc22d1
Gtf2a1l
4921539E11Rik
Dcaf4
Klf6
Zfp36l1
Rnf169
Dgat2
Arl15
Acp6
Ddit4
Calm1
Eif2s3y
H4c14
Rbm14
Gm21992
Mok
Msh6
Gtf2b
Gpx1
Ube2o
Hsp90ab1
Fam32a
Ctsl
D230025D16Rik
Rfc5
Fus
H2-DMa
Brd2
Hrob
Tbc1d10b
Mylpf
Raf1
Atp1a1
Cbx4
Olfr646
S1pr2
Zfp532
Pnp
Aplp2
Phc1
Gadd45a
Coro1b
H1f3
Rpgrip1
Actb
Rnf103
Jpt1
Ccn4
Tas2r134
Eif4g2
Thrsp
Mis18bp1
BC005537
Arhgap19
Clu
Agrp
Trim40
Nanog
Trmt1
Men1
Prdm14
Mat2a
Id3
Tubb4b
Chd9
Sirt4
Ermard
Smarca5
Prdx1
Errfi1
Nme1
Cox17
Rpl11
Exosc5
Bckdha
Srsf2
Mfsd11
Spg20
Sf3b1
Cyfip2
Letmd1
Dusp1
Dag1
Eif4a1
Nphs1
Mib2
Kank3
Cdh12
Nup50
Mknk2
Jam2
Tmem135
Tle5
Pcna
P4ha1
Hagh
Fahd1
Clec11a
Mcl1
Arl4d
Wsb1
Spata33
Rps12
Chmp1a
Dhx9
Slc29a1
Mymx
Slc12a7
Zfp979
Snx6
Dedd
Aven
Tefm
Dhx8
Tnfrsf19
Psmb7
Actn4
Btg1
Gapdh
Amd2
Amd1
Hnrnpa2b1
Hbegf
Cbx3
Ubxn2a
Gtf2f1
Wiz
Mrpl37
Cyb5rl
Amacr
Zfp598
Trim7
Ago2
Serpinf2
Selenbp1
Ndufa6
Dpp4
Ehd4
Tmem116
Itpk1
Erp29
Arl6ip1
Trp53inp1
Gpcpd1
Sertad1
Agpat2
Rab8a
Omp
Ankrd44
Phf11d
H2bc1
H2ac1
Slc38a2
Ftl1
Vegfa
Guf1
Ifrd1
Zfp980
Sephs2
Slc38a5
Sema4b
Mill1
Ttc39c
Spg11
Zfp710
Tuba4a
A630095N17Rik
Lman1
Dmxl1
Taar6
Faim
Resf1
Ppp2r5e
Marchf3
Ddx5
Cep95
Atg4d
Slbp
Itpr1
Pyroxd1
Fgl2
Rita1
Ddx54
Cfl2
Gtf3c6
Plxdc1
Cog6
Luzp1
Hjurp
A730008H23Rik
Zfand5
Zfp438
Dhx32
Cpt1a
Nsrp1
Fn1
Zfp119a
Nsd1
Gfod1
Tnrc6c
Mbd3
Acsl4
Rbmy
Gm21708
Gm21677
Sqstm1
Dgat1
Rhob
Nfam1
Pabpc1
Spred2
Ppp1r3c
Txlng
Tmem205
Sod1
Ccdc159
Fos
Skp1
Eif1
Stpg4
Nfe2
Acly
Tob2
Pbk
Klf7
Rcbtb1
Sema4f
Vcl
Tlcd1
Gipc1
Peli1
Tmem107
Mllt6
Tpst1
Slc25a39
Vars
D17H6S56E-5
Gja1
BC031181
Katna1
Agbl5
Eprs
Dennd6a
Cep43
Wsb2
Vmn2r55
Slc25a3
Muc1
Dpysl2
Dhcr24
Extl1
Ankrd11
Maats1
Ep400
Msmo1
Spata16
Lipe
Cela1
Dnaja1
Ppp1r15b
Lgi4
Fxyd7
Fxyd1
Rxrg
Pigt
Ubc
Eef1a1
Xrcc1
Pitrm1
Pinlyp
Eif4e1b
Hnrnph1
R3hdm2
Gfpt2
Lgals9
Mafb
Mfsd14a
Ccnyl1
Slc9a3r1
Kazn
Inmt
Arhgap27
Tmem64
Maml1
Tmem60
Phtf2
Rps3
Epha2
Creb1
H2-M5
Vgll4
Sgpl1
Ghdc
Havcr2
Glul
Ass1
Ino80c
Phactr3
Klk8
Ltn1
Rps9
Pnpla8
Mnat1
Rps20
P4hb
Jun
Spc25
Plk2
G6pc2
Styxl1
Mdh2
Rusc2
Clic4
Ncl
Gm20806
Pdia3
Mbtps1
Catsper2
Ubr4
Snrpe
Mterf1b
Gc
Herc2
Ccn3
Map4k4
Nsa2
Gtf2a2
Gfm2
Usp37
Traf7
Cnot9
Smndc1
Mrpl44
Sap18b
Sap18
Gm10710
Copz1
Cebpa
Znrf1
AU018091
Rpl23
Ctnnb1
Ppp1r2
Orai1
Mterf1a
Kmt5b
Chn2
Sirt3
Sap30
Psmd13
Nr6a1
Sec22c
Fam174c
Cirbp
Sirt1
Gnai3
Ubap1
Pdcl3
Ttc41
Tra2b
Hsp90b1
Fah
Impdh2
Adpgk
Trpm3
Depdc1a
Cenpm
Shoc2
Bbip1
Abcb7
Rab13
Ush1g
Otop2
Ipmk
Cisd1
Mad2l1bp
Rpl8
Prmt8
Pbx2
Ndufs7
Gpsm3
Dok4
Commd5
Idi1
Gria3
Sec22b
Baiap2
St3gal3
Siah2
Rpl26
Ankrd28
Defb48
Cpm
Rlbp1
Fasn
Fanci
Ankar
Tcta
Rhoa
Cdkn1a
Rpl36al
Mgat2
Hhex
Frmd6
Prr5
Uspl1
Spry2
Ap4e1
Tor1b
Otub2
Mertk
Tmem235
Vamp1
Misp3
Dnajb6
Bcl11b
Ppp1r15a
Plekha4
Nudcd2
Hmmr
Opa1
Kctd5
Ccdc102a
Adgrg5
Gca
Mrpl21
Il12rb2
Ighmbp2
Hs3st3b1
Atp5e
Trp53inp2
Tmem79
Smg5
Pcmtd1
Cat
Arvcf
Ndufs8
Urgcp
Musk
Il3ra
Hsd11b1
Atp1a4
Tsc22d2
Taok3
Slc25a51
Ndel1
Ammecr1l
Slc25a30
Sesn2
Chchd1
Slc44a3
Erf
Rpl17
Hmga1b
Hmga1
Napepld
Susd6
Map1lc3b
Gls
Wdr77
Atp5pb
Pnma2
Myo1d
Ttc25
Plec
Klf10
Mocs1
Slc22a23
Rps6
Paxip1
Zfyve28
Nxf1
Cfap99
Ptpmt1
Por
Olfr1396
Dpp9
Ppp3ca
Fxn
Txnip
Slx4ip
Pdhx
Apip
Fdx1
Klhl21
Id2
G3bp2
Map3k12
Ints11
Cptp
Megf8
Dusp5
Dnajb1
Zmiz1
Mrpl1
Olfr1128
Kifc3
Ncapd2
Mrpl51
Lilr4b
Iqcm
Acer2
Mrpl39
Caap1
Slx1b
Muc5ac
Bola2
Ncoa3
Myo10
Mllt10
Kcnk4
Clcn4
Zfp219
Pgbd5
Epb41
Dnajb4
Chchd2
Eras
Zfp322a
Usp45
Nfkbia
Il1b
Fer
Arhgef26
U2surp
Hspa1l
Hspa1a
Mylip
Arrdc3
Gm20939
Ptpn6
Grcc10
Ciao2b
Rsrc2
Kntc1
Cdkn2aip
Sema4a
Asb2
Rwdd2b
Med23
4932438A13Rik
Mpc1
Kdm4c
Gm20826
Ccdc110
Fyco1
Eif4ebp2
Ckb
Acy3
Ap1g2
Man1a
Oaz2
Fth1
Eepd1
Ubr3
Tpm1
Tmbim6
H2-Bl
Chordc1
Atp1b2
Zyg11a
Foxp2
Sertad2
Twistnb
Rnf125
Kxd1
Gas1
Fkbp8
Elf1
Slc22a21