ChIP-Atlas: Target genes

Potential target genes for Rara

Query protein: Rara
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX018669 | ES cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Rara's Target genes

◢ Rara: Average

◢ SRX3301664: Embryonic limb

◢ SRX3301665: Embryonic limb

◣ SRX018669: ES cells

◢ SRX208055: ES cells

◢ SRX208062: ES cells

◢ SRX520462: F9

◢ SRX520468: F9

◢ SRX520474: F9

◢ SRX520479: F9

◢ SRX4369776: Germline stem cells

◢ SRX4369779: Germline stem cells

◢ SRX4369782: Germline stem cells

◢ SRX4369785: Germline stem cells

◢ SRX337439: Liver

◢ SRX018670: mESC derived neural cells

◢ SRX118692: mESC derived neural cells

◢ SRX118693: mESC derived neural cells

◢ SRX675957: Th1 Cells

◢ Rara: STRING

Wwox
Esr1
Olfr806
Abhd6
Tent5c
Gcgr
Tcstv3
Vmn2r102
Sbno2
Kpna1
Csf2ra
Scn8a
Stap2
Mpnd
Cbr3
Il31ra
Brox
Aida
Lrch4
Fbxo24
Hrh2
Klrb1b
Olfr1158
Znhit1
Plod3
Dchs2
Rasip1
Izumo1
Oasl1
Crebzf
Rps29
Prickle1
Rrad
Cdh16
Fam227b
Dtwd1
Ifna13
Olfr1219
Awat2
Zscan4b
Mmp25
Pbk
Trim12a
Krtap3-2
Taar7a
Nudcd2
Hmmr
Zfp598
Zfp143
1810037I17Rik
Tyw1
Sbds
Eprs
Sspn
Obi1
Olfr117
Malt1
Slc33a1
Rbp4
Cldn34d
Gulp1
Ldlr
Zdhhc17
Lurap1l
Lgals7
Tpm1
Lhx5
Dgat1
Ccdc73
Olfr850
Ms4a1
Cyp2t4
Olfr1030
Commd1
Zrsr1
Tacstd2
Ctxn3
Calr3
1700030K09Rik
Tgif1
Fah
Ipo11
Pax2
Nemf
Rps9
Ccdc184
Asb8
Tmem265
Sly
Gm20931
Olfr389
Grm7
Sirpb1c
Luzp4
Scgb2b26
Olfr729
Olfr728
Naa11
Vmn2r19
Rmi2
2510009E07Rik
Satb2
Aven
Bbs2
Kbtbd3
Aasdhppt
Creb1
Tmem249
Specc1l
Rab7
Naa50
Atp6v1a
Fezf1
Pappa2
Col17a1
Pik3c2g
2610008E11Rik
Olfr594
Gm14595
Gm14590
Myocd
Trim34b
Olfr620
Olfr619
Hdgfl1
Gm4836
Gm14819
Gm14632
Gm10487
Gm10486
Gm10230
Gm10147
Gm10096
Gm10058
Pth
Ankar
Etl4
Fxr2
Rad18
Itgb2
Nqo2
Saraf
Zfp1
Nagk
Fgf22
BC034090
Hunk
Pnpla8
Gm4925
Arl1
Prkdc
Gtf2a2
Taco1
Pold4
Zbtb12
Gabarapl1
Thbs3
Mtx1
Ifna5
Sh3kbp1
Gm21258
Gm20736
Elavl2
Lrch1
Zscan4c
Vmn2r12
S100a3
Olfr46
Olfr1008
Car5a
Pcbp1
Anapc15
Gm20594
Tmem132d
Six6
Dcaf5
Plekhg1
Ovol2
Ergic1
AW549877
Vps8
Opa1
Ctsz
Zfp607a
Rbks
Babam2
Mup9
Nprl3
Slc38a7
Tmem125
Med15
Zfp110
Acbd5
Zfp810
Zfp148
Cdh12
Shoc2
Bbip1
Slx4ip
Ndufa12
Ct55
Hexim2
Mettl4
Gpr35
Tmem108
Nrg1
Olfr482
Vmn1r13
Bves
Mup20
Mroh7
Was
Ssty1
Gm21454
Cst10
Syt12
Rab29
Olfr1385
Klk5
Gm5935
Plekhb1
Psip1
Lrrc58
Klhl29
Stx11
Cd1d1
Slc35f3
Nfil3
Snx10
Pbrm1
Wiz
Uros
Bccip
Trhr2
Ubp1
Tmub2
Tmem222
Tmem203
Ndor1
Fis1
Zfp260
Proca1
Sidt2
G3bp2
Tmbim6
2610524H06Rik
Adcy9
Pygl
Cdrt4
Edil3
Olfr99
Rin2
Mcub
Spdye4a
2300002M23Rik
Trappc2l
Galns
Rnf220
Mapk13
Ambra1
Hmox2
Dhcr7
Npm2
Abr
Pnrc2
Ppfibp2
Trrap
Lrp4
Asmt
Lsm14a
Dcaf10
Pisd
Olfr805
Ky
Fyco1
Kdm3b
Rpl38
Hpx
Letmd1
Psmb2
Knop1
Iqck
Spata33
Chmp1a
Ncmap
Rusc1
Pidd1
Slc25a22
Baz1b
Rxrb
Col11a2
Denr
Slc15a1
H4c8
H2ac10
Eapp
Tex14
Fbxw7
Akirin2
Calr
Adgra2
H4c3
H1f6
Gabarapl2
Kcnk5
Efnb3
Tmem33
Rarb
H3c7
Hivep3
Oxnad1
Dph3
Aqp3
Ints3
H4c2
Gpx4
Trim29
Tmem181a
Atp11b
Fubp3
Znfx1
Socs3
Tomm5
H3c6
Mtf2
Ssty2
Gm21242
Cdx1
H4c4
H2bc6
H3c2
H3f3b
Rdm1
Prdx6
Hoxb13
BC107364
Bcl2a1a
Taf13
Srsf7
Ilf2
Slc35g3
Polr2a
H2bc9
Olfr180
Bcl2a1b
Mkrn1
H4c1
Tctn1
Notch4
Mycn
Ier5
H3c3
H2bc3
Cdk15
Cd44
Tmem191c
H3c8
Cyp26a1
Erdr1
H3c11
H2bc22
H2ac22
H1f5
Abl1
Pspn
Alkbh7
Brwd1
Vgll2
Adam5
Tfrc
Bcl2a1d
P4ha3
Taf4
Kat7
H3c15
H3c14
H2ac19
H2ac18
H4c11
Klf2
Capns1
H4bc24
H2bc23
H2ac24
H2ac23
Ksr1
Ier2
Sub1
Ect2
Cyth4
H4c18
Poldip3
Rnf19b
Ing1
Enpp4
Jund
Iqcn
H4f16
H2aj
Cidea
Fam24b
Nek2
Taf12
H2ac4
Hspa5
Mettl14
Xylb
Tcp11
Rnf13
Mreg
Rhobtb1
A930033H14Rik
Cic
Trib3
H4c9
H2bc11
H2ac11
Nabp1
Srsf3
Slc43a1
H3c13
H2bc18
Galnt2
Mafa
H2bc21
H2ac21
H2ac20
H3c1
H1f1
H2bc4
H2ac6
Dlg4
H2ax
Gja4
Gtpbp4
Ccin
Adgre5
Evi5
Ap3s2
Sgf29
Itga5
Hnrnpab
H4c17
H1f2
Bmt2
Ttpal
H2bc12
H2ac12
Foxo3
Klf4
Pmepa1
Rgs18
H4c6
Gtf2a1
Nfyb
Gstp2
Nudt4
Aadacl2fm1
H1f4
Arrdc2
Creld1
Nodal
Plk3
Phf5a
Aco2
Rsrp1
H3c10
H2bc14
H2bc13
H2ac13
Smc3
Dppa2
Btg2
Cited2
Mphosph9
2810006K23Rik
Tm7sf3
Ubb
Sumo1
C1qbp
Asph
Hspa8
Foxp1
Rrn3
H3c4
H2bc8
H2bc7
H2ac8
H2ac7
Zbtb37
H4c12
H2bc15
H2ac15
Fam53c
Tmigd1
Icam1
Ttf1
Fbxo6
Ifitm7
Bmerb1
Tob1
Arid5a
Sfi1
Arf4
Hspb8
Dusp9
Gm3448
Gm3417
Ints6
Pitpnc1
Ttk
Pcx
Slc6a16
Cd37
Junb
Rarg
Zswim8
Porcn
Zdhhc18
Ggact
Tcte3
Gm3435
Ranbp3l
Kng2
Jarid2
Tpm2
Dcpp1
Hexim1
Gm867
Chchd10
Rpl3
Calm2
Bcar1
Ankrd39
Zfp827
Ppdpf
Atp2a2
Mtg2
Sde2
Nufip2
Rnd3
Stra8
Creb3l3
9030025P20Rik
Mybpc3
Rai1
Utp14b
Hps5
Gtf2h1
Acsl3
Sdha
Ccdc127
Mpp7
Dpysl3
Sgk1
Nop58
Hsp90aa1
Stk3
Srsf5
Insig1
Sntb2
Rnaset2b
Capn3
Nudt1
Csrnp2
Sumf1
Trpm1
Mbd6
Ddit3
Fut8
Atg14
Haus1
Atp5a1
Ppp1r10
Mrps18b
Slc9a1
Gm648
Dnajb9
Uck1
Tro
Rnaset2a
Pbld2
Hnrnph3
Tsc22d1
Npbwr1
Gtf2a1l
4921539E11Rik
Dcaf4
Klf6
Hoxa1
Zfp36l1
Rnf169
Dgat2
Arl15
Acp6
Ddit4
Calm1
Eif2s3y
H4c14
Rbm14
Gm21992
Mok
Msh6
Gtf2b
Gpx1
Ube2o
Sacm1l
Hsp90ab1
Fam32a
Ctsl
Fbxo31
D230025D16Rik
Rfc5
Fus
H2-DMa
Brd2
Adck5
Hrob
Tbc1d10b
Mylpf
Raf1
Atp1a1
Cbx4
Olfr646
S1pr2
Zfp532
Pnp
Aplp2
Phc1
Gadd45a
Coro1b
H1f3
Rpgrip1
Actb
Rnf103
Jpt1
Ccn4
Tas2r134
Eif4g2
Trim41
Thrsp
Mis18bp1
BC005537
Arhgap19
Clu
Agrp
Trim40
Nanog
Trmt1
Men1
Prdm14
Mat2a
Id3
Tubb4b
Sbk2
Chd9
Sirt4
Ermard
Smarca5
Prdx1
Errfi1
Nme1
Cox17
Rpl11
Exosc5
Bckdha
Srsf2
Mfsd11
Spg20
Sf3b1
Cyfip2
Dusp1
Dag1
Eif4a1
Nphs1
Mib2
Kank3
Nup50
Mknk2
Jam2
Tmem135
Tle5
Pcna
P4ha1
Hagh
Fahd1
Clec11a
Mcl1
Arl4d
Wsb1
Rps12
Dhx9
Slc29a1
Mymx
Slc12a7
Zfp979
Snx6
Dedd
Tefm
Dhx8
Tnfrsf19
Psmb7
Actn4
Btg1
Gapdh
Amd2
Amd1
Hnrnpa2b1
Hbegf
Cbx3
Ubxn2a
Gtf2f1
Mrpl37
Cyb5rl
Amacr
Trim7
Ago2
Serpinf2
Selenbp1
Ndufa6
Dpp4
Ehd4
Tmem116
Itpk1
Erp29
Arl6ip1
Vstm4
Trp53inp1
Atxn2
Gpcpd1
Sertad1
Agpat2
Rab8a
Omp
Ankrd44
Phf11d
H2bc1
H2ac1
Slc38a2
Ftl1
Vegfa
Guf1
Ifrd1
Zfp980
Sephs2
Slc38a5
Sema4b
Mill1
Gcm2
Ttc39c
Spg11
Zfp710
Tuba4a
A630095N17Rik
Lman1
Kcnn2
Dmxl1
Taar6
Faim
Resf1
Ppp2r5e
Marchf3
Ddx5
Cep95
Atg4d
Slbp
Itpr1
Pyroxd1
Fgl2
Rita1
Ddx54
Cfl2
Gtf3c6
Plxdc1
Cog6
Luzp1
Hjurp
A730008H23Rik
Zfand5
Zfp438
Dhx32
Cpt1a
Nsrp1
Fn1
Zfp119a
Nsd1
Gfod1
Tnrc6c
Mbd3
Acsl4
Rbmy
Gm21708
Gm21677
Sqstm1
Rhob
Nfam1
Pabpc1
Spred2
Ppp1r3c
Gabrb3
Txlng
Tmem205
Sod1
Ccdc159
Fos
Skp1
Eif1
Stpg4
Nfe2
Acly
Tob2
Klf7
Rcbtb1
Sema4f
Vcl
Tlcd1
Gipc1
Peli1
Ifna6
Tmem107
Mllt6
Tpst1
Slc25a39
Vars
D17H6S56E-5
Gja1
BC031181
Katna1
Agbl5
Dennd6a
Gucy1a2
Cep43
Wsb2
Vmn2r55
Slc25a3
Muc1
Dpysl2
Dhcr24
Btrc
Extl1
Ankrd11
Maats1
Ep400
Msmo1
Spata16
Lipe
Etv3l
Cela1
Dnaja1
Ppp1r15b
Lgi4
Fxyd7
Fxyd1
Rxrg
Pigt
Ubc
Eef1a1
Cnga1
Xrcc1
Pitrm1
Pinlyp
Eif4e1b
Grap
Hnrnph1
R3hdm2
Gfpt2
Lgals9
Mafb
Mfsd14a
Ccnyl1
Slc9a3r1
Kazn
Inmt
Arhgap27
Tmem64
Maml1
Tmem60
Phtf2
Rps3
Epha2
H2-M5
Vgll4
Sgpl1
Ghdc
Havcr2
Glul
Ass1
Ino80c
Phactr3
Klk8
Ltn1
Mnat1
Rps20
P4hb
Jun
Spc25
Plk2
G6pc2
Styxl1
Mdh2
Rusc2
Clic4
Ncl
Gm20806
Pdia3
Mbtps1
Catsper2
Adamts19
Ubr4
Snrpe
Mterf1b
Gc
Herc2
Ccn3
Map4k4
Nsa2
Gfm2
Usp37
Traf7
Cnot9
Smndc1
Mrpl44
Sap18b
Sap18
Gm10710
Copz1
Cebpa
Znrf1
AU018091
Rpl23
Ctnnb1
Ppp1r2
Orai1
Mterf1a
Kmt5b
Chn2
Sirt3
Sap30
Psmd13
Nr6a1
Trim58
Sec22c
Fam174c
Cirbp
Slfn4
Sirt1
Gnai3
Ubap1
Pdcl3
Ttc41
Tra2b
Hsp90b1
Impdh2
Adpgk
Trpm3
Depdc1a
Cenpm
Abcb7
Rab13
Ush1g
Otop2
Ipmk
Cisd1
Mad2l1bp
Rpl8
Prmt8
Pbx2
Ndufs7
Gpsm3
Dok4
Commd5
Idi1
Gria3
Sec22b
Baiap2
St3gal3
Siah2
Rpl26
Ankrd28
Defb48
Cpm
Rlbp1
Fasn
Fanci
Tcta
Rhoa
Cdkn1a
Rpl36al
Mgat2
Hhex
Frmd6
Prr5
Uspl1
Spry2
Ap4e1
Tor1b
Otub2
Mertk
Tmem235
Vamp1