ChIP-Atlas: Target genes

Potential target genes for Rara

Query protein: Rara
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: Rara | Average
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Rara's Target genes

◣ Rara: Average

◢ SRX3301664: Embryonic limb

◢ SRX3301665: Embryonic limb

◢ SRX018669: ES cells

◢ SRX208055: ES cells

◢ SRX208062: ES cells

◢ SRX520462: F9

◢ SRX520468: F9

◢ SRX520474: F9

◢ SRX520479: F9

◢ SRX4369776: Germline stem cells

◢ SRX4369779: Germline stem cells

◢ SRX4369782: Germline stem cells

◢ SRX4369785: Germline stem cells

◢ SRX337439: Liver

◢ SRX018670: mESC derived neural cells

◢ SRX118692: mESC derived neural cells

◢ SRX118693: mESC derived neural cells

◢ SRX675957: Th1 Cells

◢ Rara: STRING

Tcstv3
Olfr806
Abhd6
Wwox
Cldn34d
Kpna1
Esr1
Brox
Aida
Asmt
Tent5c
Csf2ra
Oasl1
Il31ra
Vmn2r102
Slc15a1
H4c8
H2ac10
Eapp
Tex14
Fbxw7
Akirin2
Sspn
Calr
Adgra2
H4c3
H1f6
Gcgr
Gabarapl2
Tmem125
Kcnk5
Efnb3
Rbks
Babam2
Tmem33
Plekhb1
Fam227b
Dtwd1
Rarb
H3c7
Hivep3
Sbno2
Oxnad1
Dph3
Aqp3
Ints3
H4c2
Gpx4
Trim29
Tmem181a
Hmox2
Atp11b
Nemf
Fubp3
Znfx1
Socs3
Tomm5
H3c6
Mtf2
Ssty2
Gm21242
Cdx1
H4c4
H2bc6
Rps29
H3c2
H3f3b
Rdm1
Prdx6
Pidd1
Rasip1
Hoxb13
BC107364
Bcl2a1a
Taf13
Srsf7
Slc25a22
Ilf2
Slc35g3
Polr2a
Izumo1
H2bc9
Olfr180
Bcl2a1b
Mkrn1
H4c1
Tctn1
Notch4
Ifna13
Mycn
Ier5
H3c3
H2bc3
Cdk15
Cd44
Tmem191c
H3c8
Cyp26a1
Erdr1
H3c11
H2bc22
H2ac22
H1f5
Abl1
Pspn
Alkbh7
Brwd1
Vgll2
Adam5
Tfrc
Bcl2a1d
P4ha3
Taf4
Kat7
H3c15
H3c14
H2ac19
H2ac18
Dchs2
H4c11
Klf2
Capns1
H4bc24
H2bc23
H2ac24
H2ac23
Ksr1
Ier2
Sub1
Ect2
Cyth4
H4c18
Poldip3
Rnf19b
Ing1
Enpp4
Jund
Iqcn
H4f16
H2aj
Cidea
Fam24b
Nek2
Taf12
H2ac4
Malt1
Hspa5
Mettl14
Xylb
Crebzf
Tcp11
Rnf13
Mreg
Prkdc
Rhobtb1
A930033H14Rik
Cic
Trib3
H4c9
H2bc11
H2ac11
Nabp1
Baz1b
Srsf3
Slc43a1
Gm20594
H3c13
H2bc18
Galnt2
Mafa
H2bc21
H2ac21
H2ac20
H3c1
H1f1
H2bc4
H2ac6
Dlg4
H2ax
Abr
Gja4
Gtpbp4
Ccin
Adgre5
Evi5
Ap3s2
Sgf29
Itga5
Hnrnpab
H4c17
H1f2
Bmt2
Ttpal
H2bc12
H2ac12
Foxo3
Klf4
Pmepa1
Rgs18
H4c6
Ncmap
Gtf2a1
Nfyb
Gstp2
Nudt4
Aadacl2fm1
H1f4
Arrdc2
Creld1
Nodal
Plk3
Phf5a
Aco2
Rsrp1
H3c10
H2bc14
H2bc13
H2ac13
Smc3
Dppa2
Btg2
Cited2
Mphosph9
2810006K23Rik
Tm7sf3
Ubb
Sumo1
C1qbp
Asph
Hspa8
Foxp1
Scn8a
Rrn3
H3c4
H2bc8
H2bc7
H2ac8
H2ac7
Zbtb37
H4c12
H2bc15
H2ac15
Fam53c
Tmigd1
Icam1
Ttf1
Fbxo6
Ifitm7
Bmerb1
Tob1
Arid5a
Sfi1
Arf4
Rusc1
Hspb8
Dusp9
Gm3448
Gm3417
Ints6
Stap2
Mpnd
Pitpnc1
Ttk
Pcx
Slc6a16
Cd37
Junb
Rarg
Zswim8
Taar7a
Porcn
Zdhhc18
Ggact
Tcte3
Gm3435
Ranbp3l
Kng2
Jarid2
Tpm2
Dcpp1
Hexim1
Rab7
Gm867
Chchd10
Rpl3
Calm2
Bcar1
Ankrd39
Zfp827
Ppdpf
Atp2a2
Mtg2
Sde2
Nufip2
Rnd3
Stra8
Creb3l3
9030025P20Rik
Mybpc3
Hrh2
Rai1
Lrch4
Fbxo24
Utp14b
Hps5
Gtf2h1
Acsl3
Sdha
Ccdc127
Mpp7
Dpysl3
Sgk1
Zfp143
Nop58
Hsp90aa1
Stk3
Srsf5
Insig1
Sntb2
Rnaset2b
Capn3
Nudt1
Csrnp2
Sumf1
Trpm1
Mbd6
Ddit3
Fut8
Atg14
Haus1
Atp5a1
Ppp1r10
Mrps18b
Slc9a1
Gm648
Dnajb9
Uck1
Tro
Rnaset2a
Pbld2
Hnrnph3
Tsc22d1
Npbwr1
Gtf2a1l
4921539E11Rik
Dcaf4
Klf6
Hoxa1
Zfp36l1
Rnf169
Dgat2
Arl15
Acp6
Ddit4
Calm1
Eif2s3y
H4c14
Rbm14
Gm21992
Mok
Msh6
Gtf2b
Gpx1
Ube2o
Sacm1l
Hsp90ab1
Fam32a
Ctsl
Fbxo31
Cbr3
D230025D16Rik
Rfc5
Fus
H2-DMa
Brd2
Adck5
Hrob
Tbc1d10b
Mylpf
Raf1
Atp1a1
Cbx4
Olfr646
S1pr2
Zfp532
Pnp
Aplp2
Phc1
Gadd45a
Coro1b
H1f3
Rpgrip1
Actb
Rnf103
Jpt1
Ccn4
Tas2r134
Eif4g2
Trim41
Thrsp
Mis18bp1
BC005537
Arhgap19
Clu
Agrp
Trim40
Nanog
Trmt1
Men1
Prdm14
Mat2a
Id3
Tubb4b
Sbk2
Chd9
Sirt4
Ermard
Smarca5
Prdx1
Errfi1
Nme1
Cox17
Rpl11
Exosc5
Bckdha
Srsf2
Mfsd11
Spg20
Sf3b1
Cyfip2
Letmd1
Dusp1
Dag1
Eif4a1
Nphs1
Mib2
Kank3
Cdh12
Nup50
Mknk2
Jam2
Tmem135
Tle5
Pcna
P4ha1
Hagh
Fahd1
Clec11a
Mcl1
Arl4d
Wsb1
Spata33
Rps12
Chmp1a
Dhx9
Slc29a1
Mymx
Slc12a7
Zfp979
Snx6
Dedd
Aven
Tefm
Dhx8
Tnfrsf19
Psmb7
Proca1
Actn4
Btg1
Gapdh
Amd2
Amd1
Hnrnpa2b1
Hbegf
Cbx3
Ubxn2a
Gtf2f1
Wiz
Mrpl37
Cyb5rl
Amacr
Zfp598
Trim7
Ago2
Serpinf2
Selenbp1
Ndufa6
Dpp4
Ehd4
Tmem116
Itpk1
Erp29
Arl6ip1
Vstm4
Trp53inp1
Atxn2
Gpcpd1
Znhit1
Plod3
Sertad1
Agpat2
Rab8a
Omp
Ankrd44
Phf11d
H2bc1
H2ac1
Slc38a2
Ftl1
Vegfa
Guf1
Ifrd1
Zfp980
Sephs2
Slc38a5
Sema4b
Mill1
Gcm2
Ttc39c
Spg11
Zfp710
Tuba4a
A630095N17Rik
Lman1
Kcnn2
Dmxl1
Taar6
Faim
Resf1
Ppp2r5e
Marchf3
Ddx5
Cep95
Atg4d
Slbp
Itpr1
Pyroxd1
Fgl2
Rita1
Ddx54
Cfl2
Gtf3c6
Plxdc1
Cog6
Luzp1
Hjurp
A730008H23Rik
Zfand5
Zfp438
Dhx32
Cpt1a
Nsrp1
Fn1
Zfp119a
Nsd1
Gfod1
Tnrc6c
Mbd3
Acsl4
Rbmy
Gm21708
Gm21677
Sqstm1
Dgat1
Rhob
Nfam1
Pabpc1
Spred2
Ppp1r3c
Gabrb3
Txlng
Tmem205
Sod1
Ccdc159
Fos
Skp1
Eif1
Stpg4
Nfe2
Acly
Tob2
Pbk
Klf7
Rcbtb1
Sema4f
Vcl
Tlcd1
Gipc1
Peli1
Ifna6
Tmem107
Mllt6
Tpst1
Slc25a39
Vars
D17H6S56E-5
Gja1
BC031181
Katna1
Agbl5
Eprs
Dennd6a
Gucy1a2
Cep43
Wsb2
Vmn2r55
Slc25a3
Muc1
Dpysl2
Dhcr24
Btrc
Extl1
Ankrd11
Maats1
Ep400
Msmo1
Spata16
Lipe
Etv3l
Cela1
Dnaja1
Ppp1r15b
Lgi4
Fxyd7
Fxyd1
Rxrg
Pigt
Ubc
Eef1a1
Cnga1
Xrcc1
Pitrm1
Pinlyp
Eif4e1b
Grap
Hnrnph1
R3hdm2
Gfpt2
Lgals9
Dcaf5
Mafb
Mfsd14a
Ccnyl1
Slc9a3r1
Kazn
Inmt
Arhgap27
Tmem64
Maml1
Tmem60
Phtf2
Rps3
Epha2
Creb1
H2-M5
Vgll4
Sgpl1
Ghdc
Havcr2
Glul
Ass1
Ino80c
Phactr3
Klk8
Ltn1
Rps9
Pnpla8
Mnat1
Rps20
P4hb
Jun
Spc25
Plk2
G6pc2
Styxl1
Mdh2
Rusc2
Clic4
Ncl
Gm20806
Pdia3
Mbtps1
Catsper2
Adamts19
Ubr4
Snrpe
Mterf1b
Gc
Herc2
Ccn3
Map4k4
Nsa2
Gtf2a2
Gfm2
Usp37
Traf7
Cnot9
Smndc1
Mrpl44
Sap18b
Sap18
Gm10710
Copz1
Cebpa
Znrf1
AU018091
Rpl23
Ctnnb1
Ppp1r2
Orai1
Mterf1a
Kmt5b
Chn2
Sirt3
Sap30
Psmd13
Nr6a1
Trim58
Sec22c
Fam174c
Cirbp
Slfn4
Sirt1
Gnai3
Ubap1
Pdcl3
Ttc41
Tra2b
Hsp90b1
Fah
Impdh2
Adpgk
Trpm3
Depdc1a
Cenpm
Shoc2
Bbip1
Abcb7
Rab13
Ush1g
Otop2
Ipmk
Cisd1
Mad2l1bp
Rpl8
Prmt8
Pbx2
Ndufs7
Gpsm3
Dok4
Commd5
Idi1
Gria3
Sec22b
Baiap2
St3gal3
Siah2
Rpl26
Ankrd28
Defb48
Cpm
Rlbp1
Fasn
Fanci
Ankar
Tcta
Rhoa
Cdkn1a
Rpl36al
Mgat2
Hhex
Frmd6
Prr5
Uspl1
Spry2
Ap4e1
Tor1b
Otub2
Mertk
Tmem235
Vamp1
Misp3
Dnajb6
Bcl11b
Ppp1r15a
Plekha4
Nudcd2
Hmmr
Opa1
Kctd5
Ccdc102a
Adgrg5
Gca
Limch1
Mrpl21
Il12rb2
Ighmbp2
Hs3st3b1
Atp5e
Trp53inp2
Tmem79
Smg5
Pcmtd1
Cat
Npy5r
Arvcf
Trim17
H3f4
Ndufs8
Urgcp
Musk
Il3ra
Hsd11b1
Atp1a4
Tsc22d2
Taok3
Slc25a51
Ndel1
Ammecr1l
Slc25a30
Sesn2
Chchd1
Slc44a3
Erf
Rpl17
Hmga1b
Hmga1
Napepld
Susd6
Map1lc3b
Gls
Wdr77
Atp5pb
Pnma2
Myo1d
Ttc25
Plec
Klf10
Mocs1
Slc22a23
Rps6
Paxip1
Zfyve28
Nxf1
Cfap99
Ptpmt1
Por
Olfr1396
Dpp9
Ccdc58
Ppp3ca
Fxn
Txnip
Slx4ip
Rilpl2
Pdhx
Apip
Fdx1
Klhl21
Id2
G3bp2
Map3k12
Ints11
Cptp
Megf8
Dusp5
Dnajb1
Zmiz1
Mrpl1
Olfr1128
Kifc3
Ncapd2
Mrpl51
Lilr4b
Iqcm
Acer2
Mrpl39
Caap1
Slx1b
Muc5ac
Bola2
Rara
Ncoa3
Myo10
Mllt10
Kcnk4
Clcn4
Zfp219
Pgbd5
Epb41
Dnajb4
Chchd2
Eras
Zfp322a
Usp45
Nfkbia
Il1b
Fer
Cfap126
Arhgef26
U2surp
Hspa1l
Hspa1a
Mylip
Arrdc3
Gm20939
Ptpn6
Grcc10
Ciao2b
Rsrc2
Kntc1
Ctnna3
Cdkn2aip
Sema4a
Fmc1
Asb2
Rwdd2b
Med23
4932438A13Rik
Mpc1
Kdm4c
Gm20826
Ccdc110
Fyco1
Eif4ebp2
Ckb
Acy3
Ap1g2
Man1a
Oaz2
Fth1
Eepd1
Ubr3
Tpm1
Tmbim6
H2-Bl
Chordc1
Atp1b2
Zyg11a
Foxp2
Sertad2
Twistnb
Rnf125
Kxd1
Gas1
Fkbp8
Elf1
Slc22a21
Gm21302
Gm20852
Cox7a1
Acp1
Tagap1
Serinc3
Rps2
Rnf151
Ndufb10
Cd81
Rpl7a
Med22
Ints8
Avpr1a
Zfp1
Txn1
Zfp119b
Zfp148
Slc31a1
Fkbp15
H60c
Ppcdc
Eif3a
Ttll3
Taf1d
4931406C07Rik
Whamm
Fsd2
Rpl13
Mobp
Lrrc8a
Cyp2d9
Smyd4
Rpa1
Ankle2
Ern1
Nr3c1
Lsm14a
Gm51598
Zswim3
Nup153
Acot8
Uqcrc1
Irs2
Hspa1b
Thbs4
Slc26a4
Rcl1
Cmas
Gadd45g
Fbxo46
Degs1