ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089506 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX017703: CD4+ T cells

◢ SRX687554: Erythroid progenitors

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◣ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX5162252: Placenta

◢ SRX5162253: Placenta

◢ SRX5162254: Placenta

◢ SRX4313223: RH-4

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

DUX4
BCAS3
NPAS4
HEATR6
PARD6B
TUBD1
RPS6KB1
PSMD6
CNOT3
ARFGEF2
TTC24
IQGAP3
BRIP1
ZNF217
METTL1
EEF1AKMT3
CYP27B1
PFDN4
BCAS4
TSR3
GNPTG
USP32
MOK
DYNLRB2
ALKBH2
UNG
HIPK1
XKR7
SUMF1
TRIM37
FBXO32
SLC12A9
APPBP2
FBXO5
PPM1D
SKA3
MRPL57
TEX14
RAD51C
NCOA3
COL23A1
NAGPA
C3orf14
SMYD5
PHTF1
MCM7
AP4M1
VPS50
HEPACAM2
SFSWAP
DHX40
C8orf33
CSTF1
AURKA
C12orf66
CA4
SCRT1
DGAT1
BARHL1
CCT2
SAP30BP
RECQL5
EPN1
CREBRF
CRBN
RAD54B
TRIM33
UTP20
WDR4
PTPRN2
YPEL2
TCTN2
FANCI
RUVBL1
PGBD5
ATG14
NCAPH
ITPRIPL1
HSF1
BOP1
HSDL1
DNAAF1
RMDN1
CPNE3
HTR5A
SPATA25
ZSWIM1
NEURL2
CTSA
ART1
MCM10
NUP214
IQSEC3
HCFC2
GLT8D2
ATXN7
THOC7
SGO1
RNF166
CTU2
RAE1
MTRNR2L3
SLC37A1
RSPH1
TROAP
ZNF331
CCNB1
ZFYVE1
TOMM70
LNP1
CPLX2
PUF60
SMG8
CEP128
NGDN
FAM214A
RRP15
CLTC
ZFYVE26
RAD51B
RAB22A
NCKAP5L
BIRC5
DDX42
CCDC47
DYRK1B
SMIM41
ATG101
CCNA2
POLR2J3
TRMT61A
CKB
PPM1E
TRIP13
BRD9
KCNJ14
GRWD1
CCNG2
TTF2
ATXN1L
TTK
MAMDC2
SLC45A3
MAX
VARS1
DYNC2I1
SPPL2A
RNF40
CCDC189
DCLRE1B
AP4B1
FRG2
INCENP
FBXL3
XRCC2
KAT2B
INSM2
CYB561D1
YIF1A
TMEM151A
SKA2
PRR11
TADA2B
CCDC96
MAD1L1
NUDT1
MRM2
MED20
BYSL
FAM91A1
USP10
STOML1
PML
KLHDC4
SPTLC1
UBE3B
TTLL11
DDX11
TUBB3
MC1R
MFSD1
GMCL1
C16orf71
ANKS3
C16orf46
AEN
NEMP1
TMEM208
LRRC29
ZC3H18
EIF1AD
CST6
BANF1
EBAG9
TMOD3
CENPBD1
NAA25
ANGEL1
ZEB1
L1CAM
VRK1
CBLL1
NDUFAF6
LOC101928764
CCNE2
METTL3
MRPL52
MMP14
WASHC5
NSMCE2
LZTFL1
NUP107
SART1
POLR2K
SPAG1
GFOD2
ANKRD46
RNFT1
LYSMD2
TMOD2
ECT2
NOL8
CENPP
MAPK8IP2
CORO7-PAM16
CORO7
DNAJA3
CHUK
TDRKH
SAXO2
EFL1
TRIM4
VGF
SLC35A1
AP1S1
TTC27
RRP1
HAUS7
SKIV2L
NELFE
UBE2C
MOCS3
DPM1
RPP40
TRMT61B
AUH
ARFGAP1
EDC4
PRKAR1A
ACOX3
INTS1
DHX37
BRI3BP
PPM1B
FANCD2
EXO1
RABL2A
NET1
TUBAL3
TACO1
DLGAP5
DDX49
COPE
DUSP15
RHEBL1
KMT2D
TOMM22
RRP36
MEA1
KLHDC3
FRG2C
SYVN1
TAF5
COQ10A
ANKRD52
HMGCS1
SLC15A4
RTBDN
MAST1
KIFC1
SIKE1
CYP51A1
PTGFRN
SRGAP2C
FAM72B
CCDC146
HAGH
FAHD1
TF
TOPBP1
NKX1-1
ATAD2
STRN3
AP4S1
UTP23
PPP1R12B
UBE2T
EIF3H
STX16
FIS1
SLC35B1
CLDN15
ATG7
C20orf27
SLC25A40
DBF4
MCCC1
PDE4DIP
GSKIP
ATG2B
NUB1
DDX19A
ASNS
DSCC1
TMEM150A
RNF181
FOXH1
USP39
C2orf68
PPP1R16A
MKI67
OSGIN2
DCAF4
POLR2J
ZHX3
ZFAND2A
FAM72C
KIF14
ASPM
AP4E1
FAM180B
NDUFS3
KBTBD4
ADAR
LCMT1
TCP11L2
AMZ2
PSMC1
SF3B3
COG4
GTF2H3
EIF2B1
TWNK
MRPL43
LZTS2
EIF3C
EIF3CL
RGS14
LMAN2
TBX2
TBC1D13
SLC25A24
VIRMA
CDCA4
SGO2
ATP6V1C1
THOC3
ANAPC7
DUS4L-BCAP29
DUS4L
COG5
KLHL24
DCAF7
SRPK2
EIF2D
POLE3
C9orf43
ALAD
SUPT7L
SLC4A1AP
SNRPC
TPTE
SRGAP2
FAM72A
MED13
GDPGP1
CIB1
TRAPPC10
TDRD9
ATP5MPL
TSFM
EMC9
RNF31
PSME2
EFCAB6
TCF19
POU5F1
CCHCR1
ZC3HC1
U2SURP
LEKR1
METTL2A
RPGR
GNA13
NDE1
MARF1
ARMC2
ZHX1-C8orf76
ZHX1
RHBDD2
INPP5K
VANGL1
VAPB
C8orf76
UNK
H3-3B
NANS
PSEN1
CKAP5
HOMEZ
RACGAP1
PDXDC1
IARS1
ATP5MG
ZC3H3
NOTCH2NLA
RFC2
ZNF529
H1-10
TERF2IP
KARS1
ESPL1
TBC1D30
GNS
PRPF18
GLRX5
CYP2W1
COX19
NTNG1
PDSS1
URM1
DNAAF4
FRAT2
TBC1D23
SPG7
CNIH4
DZIP3
CIP2A
MIS18A
KPNA2
SPC25
CMC2
CENPN
TIGD5
EEF1D
CSDE1
POLQ
KIF18B
NOL6
KLF1
GCDH
DNASE2
RFC3
GLE1
BICDL1
MDM1
CPSF1
SLC39A4
FANK1
CCDC59
FBXO33
BMP7
EEF1E1
TSEN54
LLGL2
C1orf54
APH1A
TMEM18
SQLE
RSL24D1
SRGAP2B
FAM72D
RABL2B
GTPBP4
HEATR5B
GPATCH11
PEPD
NOTCH2
XPOT
DNAJC21
COPZ1
SH3BP5
TM9SF1
IPO4
RTF2
ROPN1L
GOLGA5
RFWD3
VCPKMT
MBTPS1
SMARCA5
B3GNT2
AGFG2
DDX21
EXOC3L1
E2F4
KIAA0895L
YWHAG
AZIN1
CCDC15
ELMO3
DNAL1
GPSM2
COX5A
ITGB1
ARPP19
CCDC86
EDC3
CDK1
MRPS23
ZNF789
ATP5MF-PTCD1
ATP5MF
SSBP2
PCNX3
MAP3K11
INTS8
GNPNAT1
MYL5
ATP5ME
BFSP1
DSTN
NME1-NME2
NME1
GPATCH4
NAXE
NHP2
ZBTB9
NBPF11
KCNH6
PIAS3
RMC1
PRIM2
ARHGEF5
TSEN2
C6orf89
PPIL1
MXD1
ACTR3
SLC25A26
USP30
FAAP24
CEP89
FZR1
DOHH
SUB1
TMEM60
PHTF2
OAZ3
MRPL9
ENDOV
AARS2
GABARAPL2
PROS1
ARL13B
SH2D3C
CDK9
NUDT3
NDUFV1
CDC14B
SMIM5
GFPT1
SSR3
TBK1
SPDYE6
MFSD14B
LOC100289561
E2F5
SPATA2L
RRM2
IPO11
DIMT1
DBNL
FAM227B
DTWD1
FAM185A
DYNC1I2
KLF10
LRFN4
PDF
NIP7
COG8
TRPM7
HAUS5
PDAP1
BUD31
ZFAND3
TMEM262
ZFPL1
CDCA5
TIMELESS
MIP
BBS1
PRMT6
IDH3A
SWI5
GOLGA2
CTDSP2
VIPAS39
AHSA1
CNIH1
AFTPH
CMTM6
DUSP11
C2orf78
MTRNR2L2
MSH3
DHFR
MAD2L1
OS9
DUS2
DPEP2NB
DDX28
NOC4L
DDX51
CCT5
ATPSCKMT
PTPN1
OXNAD1
DPH3
THAP11
HELZ
NAA20
NDUFS6
MRPL36
GATAD1
EIF1AX
WDR77
ATP5PB
NBPF12
TRIM45
MTFR2
URB1
PSMB7
SEL1L
WDR37
PSMC2
DNAJC2
SPATA33
IDI1
MPHOSPH6
HPS3
GPR146
ZNF706
ZNF585B
ZNF383
IFT22
DNAAF2
TSSK4
CORO1C
DIP2C
QTRT1
DEPDC1B
LYRM4
FARS2
KMT5A
VPS9D1
TRIM65
MRPL38
SETDB1
RNF19A
ZDHHC17
TUBA1A
TICRR
SHCBP1
PLK1
DERL1
MMS22L
NOTCH2NLB
PSMD4
DENND2C
TMED8
SAMD15
PYCR2
PCLO
SEC22B
VPS13B
HJURP
COPS3
SLC39A2
METTL17
RPL30
LIN52
ALDH6A1
SELENOS
CAMKK2
RNF44
CDHR2
RRP12
REXO4
ADAMTS13
TP53INP1
WDR35
RPTOR
MKS1
RAB1A
MATN3
DNAJC25-GNG10
DNAJC25
NPM1
UTP18
MBTD1
LINS1
ASB7
RFX1
CDK5RAP2
PLCL1
AGK
TOGARAM1
KLHL28
GMFB
PTRHD1
CENPO
LTO1
COMMD1
ZSWIM3
ACOT8
CALCOCO2
UBR5
RNF139
SUMO3
NUF2
NEIL3
HSPA9
RTEL1
SH3BGR
LCA5L
RAB5B
PMEL
CDK2
USP14
MROH1
SKP2
LMBRD2
TARS3
UQCRC2
SNF8
NAMPT
NFAT5
TRIM59
RETREG1
FERMT2
RANBP9
INKA2
ZSCAN2
DDX20
UBXN11
TBC1D15
ATP1A1
TEX10
LRRC37A3
STX4
ZNF281
TRMT1
NACC1
SPNS1
LAT
FBXL13
ARMC10
NRAS
TRUB2
COQ4
TMEM129
TACC3
SLBP
ZNF79
TM2D3
MDM2
SLC35A2
PIM2
TECPR1
UBXN7
BCKDK
KAT8
ECSIT
RXYLT1
POLR2J2
PYCR3
RNF114
GFUS
PITX3
GBF1
SCRIB
CYBC1
NARF
MRPL22
GEMIN5
USP8
MUC3A
SUSD6
S100A13
S100A1
CHTOP
PLEKHN1
NOC2L
KLHL17
RNF10
COQ5
TXLNG
ZC2HC1C
ACYP1
BLM
ZAR1L
BRCA2
GAR1
POLR3F
DZANK1
CFDP1
ARSG
FANCC
OXR1
ZNF212
SCRN3
CIR1
SLC16A6
TEX2
SLC31A1
FKBP15
PREX1
CUL2
NRBP1
STK38
MND1
TOP1MT
ATP5F1E
PRELID3B
VPS11
POLR3GL
LIX1L
ANKRD34A
CYB561
AP5Z1
CS
DLD
RBM25
TSKS
AP2A1
TRIM56
RHPN1
CKAP2L
RAD51
NCAPG
SRPRB
TMED5
CCDC18
FKBP3
FANCM
PTPRH
HSPA5
ZNF473
VRK3
LSM14B
CYB5R1
TADA3
ARPC4-TTLL3
ARPC4
ADIPOR1
TMEM183A
STRIP1
EEF2K
TMED10
SDE2
WIPI2
C14orf28
MAP2K2
EHBP1
CALB1
DISP1
FBXW8
SLC25A19
TMEM249
SLC52A2
FBXL6
ELAC2
CNBP
UBE3D
DOP1A
KNOP1
IQCK
LRRC24
RECQL4
LRRC14
MFSD3
PUS1
CGGBP1
SPOP
RFC1
ASCC3
MFSD4B
FAM162A
CCDC58
ZNF654
CBLB
ACBD3
MTG1
UPF2
PHETA1
HELZ2
LGALSL
GTSE1
SECISBP2
CKS2
PCOTH
MIPEP
C1QTNF9B
RNMT
FAM210A
CFAP298-TCP10L
CFAP298
WWP2
NOB1
SLC35A5
ATG3
CHPF2
ABCF2
DPAGT1
RPL32
SPTLC2
H2AX
C2CD2L
CELF6
FSD1L
SNX11
CBX1
CEP164
PPM1H
SLC27A3
POC1B-GALNT4
GALNT4
SNX4
PAWR
TONSL
VAC14
FBXO43
NARS2
EIF2S1
ATP6V1D
STYXL1
SSNA1
ANAPC2
POLR3B
VWA3B
CSRNP2
SENP5
MTCH1
SLC10A5
IMPA1
TNNI3
DNAAF3
STRN
NEU3
PXT1
KCTD20
RAD18
PIGU
AURKB
GATB
IREB2
GPD1
COX14
XPC
LSM3
NBN
THBS3
MTX1
ZBTB11
C7orf50
RPL24
GPATCH2L
YY1AP1
DAP3
ZNF888
BDH1
HELLS
JMJD1C
GUK1
GJC2
LDLR
NEK2
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
CORO1A
WIPI1
CNPY3
WDR43
RAB41
PDZD11
KIF4A
SF3B2
GAL3ST3
ING4
ZBTB6
RC3H2
DMPK
DMWD
ZNF263