ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089499 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX017703: CD4+ T cells

◢ SRX687554: Erythroid progenitors

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◣ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX5162252: Placenta

◢ SRX5162253: Placenta

◢ SRX5162254: Placenta

◢ SRX4313223: RH-4

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

NPAS4
HEATR6
PSMD6
BCAS3
DUX4
TUBD1
RPS6KB1
BRIP1
TEX14
RAD51C
PFDN4
TTC24
IQGAP3
HTR5A
TRIM37
SKA3
MRPL57
PARD6B
USP32
APPBP2
ATXN7
SLC12A9
SCRT1
DGAT1
PPM1D
DYNLRB2
ALKBH2
UNG
ARFGEF2
IQSEC3
FANCI
KPNA2
NCOA3
ZNF217
DCLRE1B
AP4B1
BCAS4
CPLX2
BARHL1
BMP7
SAP30BP
RECQL5
CA4
TRIP13
BRD9
C8orf33
METTL1
EEF1AKMT3
CYP27B1
VRK1
NKX1-1
RAD54B
HIPK1
HSDL1
DNAAF1
FAM72C
C12orf66
MCM10
MYBL2
TTLL11
C3orf14
TRIM33
XRCC2
CNOT3
SMG8
KIF14
POLQ
DHX40
TSR3
GNPTG
SPATA25
ZSWIM1
NEURL2
CTSA
TRMT61A
CKB
AP3B2
MAD1L1
NUDT1
MRM2
CSTF1
AURKA
HSF1
BOP1
XKR7
NOL8
CENPP
RNF166
CTU2
RFC3
FANCD2
SIKE1
BUB1
DUS2
DPEP2NB
DDX28
MTFR2
DZIP3
CIP2A
PGBD5
MOK
RRP15
SGO1
NAGPA
PHTF1
SRGAP2B
FAM72D
WDR4
TROAP
NCAPH
ITPRIPL1
L1CAM
KLF10
RRM2
KAT2B
EIF3C
EIF3CL
TONSL
RNFT1
MOCS3
DPM1
FAM214A
POLR3GL
LIX1L
ANKRD34A
SRGAP2C
FAM72B
CRBN
MAMDC2
FANK1
EXO1
WASHC5
NSMCE2
MED20
BYSL
SARS1
KCNH6
CCNA2
GTF2H3
EIF2B1
CDIPT
EXOC6
TBX2
POLR2J3
LOC101928764
ZHX3
CCT2
TRPM7
TMED10
FBXO5
SKA2
PRR11
TSEN2
ATP6V1C1
FOXH1
PPP1R16A
METTL2A
ZFYVE1
THOC7
DSCC1
NOTCH2
VARS1
CORO7-PAM16
CORO7
DNAJA3
TCTN1
RAB22A
INKA2
DDX20
AP4E1
BIRC5
TTK
EDC3
TOP1MT
TBC1D30
GNS
DYNC2I1
EIF2D
NEIL3
MRPS23
YPEL2
RTKN2
ADAT1
HSPA5
CCT5
ATPSCKMT
TMEM249
SLC52A2
FBXL6
NBPF11
TTF2
CHUK
FBXO32
LZTFL1
SGO2
CEP128
SMIM41
ATG101
RMDN1
CPNE3
RPL8
ZNF517
SUMF1
UBE2C
SFSWAP
SQLE
AZIN1
EEF1E1
RABL2B
ZC3H18
SRPRB
RCN2
POLR2K
SPAG1
IARS1
RRP12
ESPL1
INSM2
ZSCAN2
FAM180B
NDUFS3
KBTBD4
GABPB1
U2SURP
ATAD2
GABARAPL2
WASHC2C
MCM7
AP4M1
CREBRF
TCF19
POU5F1
CCHCR1
PPT1
USP14
ERN1
ZNF696
MYL12A
MYL12B
RAE1
MTRNR2L3
COQ2
TSFM
MTMR14
CKAP2L
OAZ3
MRPL9
ARMC2
UBE3D
DOP1A
POLR2J
UTP23
CMC2
CENPN
C1orf54
APH1A
CNTRL
C5
STK36
RNF25
UTP20
ART1
NEK11
ASTE1
QSOX2
DYRK1B
NUB1
CLTC
CCNB1
CDC14B
DCAF4
CYB561D1
SNAP25
GTF3C5
VANGL1
BSPRY
TTC27
WASHC2A
PTPRH
MAPK8IP2
STOML1
PML
GPR89A
PYCR3
GFUS
TSEN15
WDR43
MRPL44
TICRR
RABL2A
NBPF1
NDUFAF6
CCNE2
VAC14
TMEM262
ZFPL1
CDCA5
PPM1E
NME1-NME2
NME1
TM9SF1
IPO4
ZNF331
NET1
TUBAL3
TRIP4
PCLAF
MED13
NUF2
RTBDN
MAST1
GPR89B
ROPN1L
ZNF79
IKBIP
APAF1
ACOX3
NAA25
STX16
REXO4
ADAMTS13
TRMT44
ASNS
GET3
UMPS
RPS19
NAT10
NDUFB3
FAM126B
MYO5C
PPP1R12B
UBE2T
BICDL1
PRCP
DDIAS
RXYLT1
PDXDC1
ATXN1L
WDR35
RFX5
MTRNR2L2
MSH3
DHFR
VPS33A
ATP5F1E
PRELID3B
KLHL24
BCAS1
PRKAR1A
CENPBD1
SLCO4A1
AGFG2
NEMP1
C16orf71
ANKS3
SLC37A1
RSPH1
NUP107
PUS1
SPTLC1
DEPDC1B
TPTE
ATG14
UGGT1
TP53INP1
KIFC1
PLK4
RTEL1
STMN3
YIPF4
RAD51
PIGU
TACO1
FANCC
DHX37
BRI3BP
RACGAP1
AEN
NOTCH2NLC
GALK1
DECR1
LRRC24
TRIAP1
COX6A1
RECQL4
LRRC14
MFSD3
DDX42
CCDC47
LTO1
CDK5RAP3
SLC25A24
TOP1
PUS7
RINT1
PKD1L3
DHODH
INTS2
MDM1
TFRC
ZDHHC17
CFDP1
INIP
TUFT1
ZEB1
PREX1
CHRNA5
ESCO2
CEP55
VPS50
HEPACAM2
CENPH
RNF115
POLR3C
BLM
DLGAP5
LTV1
RBM48
PEX1
SPATA2
PSMD12
ATP1A1
NHP2
PSMB7
MXD1
RRP36
MEA1
KLHDC3
JMJD1C
PTPRN2
COL23A1
C12orf45
TMEM120B
BCAS2
NBPF12
MKI67
CNPY3
AOPEP
RRP1B
HSF2BP
TMOD3
TBK1
XPO4
ELOVL1
CDC20
SLC35B1
GLRX5
PDPR
DPY30
EIF3E
PSMD4
NOL6
DDX11
SUPV3L1
DNAH7
PKMYT1
C20orf27
MED6
CPLX1
MND1
TMEM150A
RNF181
USP39
C2orf68
RGS14
LMAN2
TBC1D15
POLR2J2
CCDC77
ARRDC4
KDM5A
STRADA
SRGAP2
FAM72A
EXOC3L1
E2F4
KIAA0895L
RNF114
ELMO3
ARHGEF5
MARCHF10
KCNJ14
GRWD1
STAT1
LRPPRC
ANKRD46
NUP54
ZNF706
CCNE1
ABL2
SMC2
KIF20A
BRD8
ZNF367
POLL
DPCD
WDR74
STX5
ATR
KLHDC4
TSEN54
LLGL2
NPM1
CASKIN2
RNF40
CCDC189
NDUFV1
MFSD1
DDX21
ZGRF1
LARP7
SLC25A19
FRAT1
ZNHIT1
PLOD3
ZSCAN25
TCP11L1
RMND5B
WWP1
METTL6
EAF1
FANCE
NAA35
VCPKMT
CCDC88A
TRAPPC10
TRIM25
SF3B3
COG4
WDR46
RGL2
PFDN6
MDM4
TBC1D13
ZNF622
LDLRAD3
INCENP
RPL6
PTPN11
VPS13B
CSRNP2
CMTR1
MMP24
MAP3K20
IPO11
DIMT1
TMEM208
LRRC29
ECT2
ATG7
SLC35A5
ATG3
MON2
TEX10
TP53RK
SLC13A3
URB1
POC5
PCOTH
MIPEP
C1QTNF9B
TMEM199
SEBOX
POLDIP2
DDX46
GFPT1
NOTCH2NLA
PIP4P2
SHCBP1
RPP40
WFDC3
DNTTIP1
SHOX2
RSRC1
NDUFAB1
CLPTM1L
KIAA1586
PRDX6
BIRC6
RPL36AL
MGAT2
CCDC86
HMGB1
P2RY11
PPAN-P2RY11
PPAN
ANGPTL6
PMS2
AIMP2
PLK1
PRPF18
HEATR5B
GPATCH11
SEL1L
HEATR5A
CHPF2
ABCF2
GPR107
GSTO2
FAM171B
FAM24A
DUS4L-BCAP29
DUS4L
COG5
RBBP5
TMEM109
PRPF19
UTP4
DERPC
CHTF8
ASCC3
CEP135
FBXW8
MRPL3
TEDC2
PTRHD1
CENPO
ZFAND2A
NME2
MXD4
AJUBA
DNMT1
BCKDK
KAT8
CAV2
RBM19
RAD18
ZNF688
C6orf89
NOMO2
RPS29
CENPA
SPPL2A
ZHX1-C8orf76
ZHX1
WWP2
NOB1
THBS3
MTX1
LRR1
ASL
GLE1
CPSF1
SLC39A4
VAPB
NOTCH2NLB
PLCG1
GTSE1
BBS5
COMMD4
ZNF778
UBE3B
MELK
TADA3
ARPC4-TTLL3
ARPC4
NOP9
DHRS1
SLC7A6OS
PRMT7
LTB4R2
PDCD6
IST1
RNASEH2A
PRDX2
WDR3
GDAP2
NGDN
THAP5
DNAJB9
IFT88
SPICE1
ANKRD40
SUSD6
AMMECR1L
KDM5B
ZNF23
ANGEL1
NOXO1
TBL3
RPS2
RNF151
LSM8
SLC25A44
FIGNL1
FSD1L
AUH
EEF2KMT
CCNG2
C16orf46
UBE2G2
PFDN5
MYG1
PPP2R3B
TMED9
B4GALT7
PROX2
BCL7B
CTNNAL1
SH3GLB2
MIGA2
LRWD1
ALKBH4
PAM16
PSMC6
RUVBL1
COG7
NAGK
TMEM67
GOLIM4
CLBA1
AHNAK2
DSE
CD2BP2
TSPYL4
RRP1
YIF1A
TMEM151A
SMIM5
CCDC150
DDX19A
EIF2S1
ATP6V1D
USP15
PDE4DIP
SENP5
PLEKHM3
SAXO2
EFL1
PCNX3
MAP3K11
NXF1
ZNF3
COPS6
MRNIP
TATDN2
STMN1
KIF21A
ZC3HC1
TOMM22
SEC22B
DNAAF4
NPIPB15
FAM174A
DCAF7
GFOD2
ZC3H3
WDR53
FBXO45
FBXW2
TEFM
ZMYND8
UNK
H3-3B
NDUFS6
MRPL36
RHEB
BSN
DAP
FZD6
TADA2B
CCDC96
NOMO3
DPY19L4
ABCC6
PDCD11
ATP5MD
CCDC59
PRMT6
RANBP6
KIAA2026
STRIP1
FAHD2A
RPL14
SLC27A2
MESD
NSG2
NTAQ1
MYBL1
SH3BGR
LCA5L
MAX
ADPGK
COMMD2
COPS3
PI4KB
CDK1
SECISBP2
CKS2
DBNDD2
POLE3
C9orf43
ALAD
EIF1AD
CST6
BANF1
NCBP2AS2
NCBP2
TM2D3
DENND2C
PGS1
PCMTD1
CENPW
PPRC1
RPSA
NOC3L
MLYCD
NIPSNAP3A
MRPL2
KLC4
CUL7
SUN3
C7orf57
RASAL2
TUT7
NOL11
TAF4B
CDT1
APRT
XPC
LSM3
CALU
TCTEX1D2
PEBP1
OTULIN
CEP350
SPC25
NRAS
CENPB
CDC25B
CPEB4
TTLL5
ERG28
RHNO1
FOXM1
STYXL1
TMEM167B
DGKZ
NDUFB2
LMNA
SLC29A2
MEX3A
MIS18A
RBM28
DNAJC25-GNG10
DNAJC25
TTLL4
RIDA
POP1
FAM117B
SH2D3C
CDK9
PGD
NUDT2
KIF24
FAM227B
DTWD1
FKBP3
FANCM
TIGD5
EEF1D
SPATA33
RRM2B
PITX3
GBF1
WDR20
HSP90AA1
UQCRC2
TARBP2
MAP3K12
VKORC1L1
STXBP3
CDC42BPG
GOLGA6L3
KIF18B
UFD1
CDC45
PTPN1
E2F8
TMEM258
FEN1
DERL1
ELP1
ABITRAM
CSDE1
RPL7A
MED22
SURF2
SURF1
EMC9
RNF31
PSME2
MLLT11
BCKDHB
CDC42SE1
BZW1
FRG2
NOM1
LSS
ADCK1
GDAP1
ZNF473
VRK3
MFSD5
DHX16
HGH1
MROH1
TMEM183A
ZNF680
SLC25A36
SLC39A9
ERH
RHEBL1
KMT2D
THOC3
RAD51AP1
C12orf4
PCNA
TMEM230
CDS2
LRRC47
HJURP
USP10
ZNF148
CACYBP
PDPK1
CEMP1
CALB1
ZNF641
NTNG1
DNA2
RNASEH1
POLR3F
DZANK1
CIT
PIAS3
DNAJC21
DYNC1H1
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
SPNS1
LAT
CORO1A
HCFC2
GLT8D2
SYS1
SRD5A1
GPN1
CCDC121
FAM161B
COQ6
NUP160
KMT5A
ZBTB26
RABGAP1
PFDN2
NIT1
DYNLL2
GKAP1
ADAMTSL4
SNRPE
SLC25A16
UBE2Q1
CHRNB2
RHBDD2
CFAP54
VCP
FANCG
TAF1C
ADAD2
GPATCH1
STK3
ZFAND3
GLRX2
PITPNC1
ZNF410
BAZ1B
ITGB4
KLHL18
KIF9
PPIL1
SKIV2L
NELFE
ZNF789
ATP5MF-PTCD1
ATP5MF
UNKL
MCCC1
SPATA17
GPATCH2
MRPL28
PRTG
NBPF6
CENPE
HSP90AB1
DDX5