ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089503 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX017703: CD4+ T cells

◢ SRX687554: Erythroid progenitors

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◣ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX5162252: Placenta

◢ SRX5162253: Placenta

◢ SRX5162254: Placenta

◢ SRX4313223: RH-4

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

BCAS3
HEATR6
DYNLRB2
PSMD6
SLC12A9
PFDN4
TUBD1
RPS6KB1
NPAS4
TRIM37
BRIP1
USP32
PARD6B
FBXO32
BMP7
TEX14
RAD51C
APPBP2
TTC24
IQGAP3
ARFGEF2
WASHC5
NSMCE2
ZNF217
METTL1
EEF1AKMT3
CYP27B1
BCAS4
SCRT1
DGAT1
SIKE1
DHX40
MOK
C16orf71
ANKS3
HTR5A
TM9SF1
IPO4
ZFYVE1
FANCD2
NCOA3
HIPK1
XKR7
PPM1D
C12orf66
RNFT1
KAT2B
C3orf14
ATXN7
CREBRF
CA4
CCNG2
BARHL1
YPEL2
GTF2H3
EIF2B1
WDR4
ZSCAN2
MAX
CDC14B
SLC37A1
RSPH1
SPTLC1
KLHDC4
UTP20
HSF1
BOP1
ALKBH2
UNG
SUMF1
TRIM33
CPLX2
MCM7
AP4M1
AGFG2
DYNC2I1
C16orf46
HSDL1
DNAAF1
NTAQ1
IQSEC3
TSR3
GNPTG
METTL3
CCNA2
FBXO5
BIRC5
FOXH1
PPP1R16A
NAA25
RNF40
CCDC189
ATP6V1C1
ARMC2
NDUFV1
KCNH6
SAP30BP
RECQL5
MED6
DBNL
TBX2
CYB561D1
ATG14
ATXN7L2
RNF114
TMEM249
SLC52A2
FBXL6
CCDC86
TRMT61A
CKB
TTC27
RABL2B
FAM214A
ATXN1L
SMIM41
ATG101
CRBN
PPM1E
SLC45A3
L1CAM
NRAS
RABL2A
C6orf89
CHFR
MBTPS1
RRP1
ROPN1L
POLR2J3
RAE1
MTRNR2L3
RNF166
CTU2
ZNF331
TMEM231
GABARAPL2
MCM10
VPS50
HEPACAM2
THOC7
EDC3
FANCI
SMIM5
C1orf54
APH1A
TMOD3
DHX37
BRI3BP
HEATR5B
GPATCH11
RAD54B
EIF3C
EIF3CL
MTFR2
QSOX2
NDUFAF6
CCNE2
UBE3D
DOP1A
HCFC2
GLT8D2
SERINC3
PKIG
MAD1L1
NUDT1
MRM2
TROAP
MOCS3
DPM1
ENDOV
ARFGAP1
PHTF1
HELZ
TRIP13
BRD9
TARS3
TTF2
DCLRE1B
AP4B1
DNAL1
ZNF696
OAZ3
MRPL9
TACO1
WDR37
IDI1
GFM1
RACGAP1
METTL2A
MTMR14
RRP15
TMEM208
LRRC29
BICDL1
CYB561
TTLL11
DEPDC1B
KAT7
CCT2
SGO1
ZNF778
GTPBP10
RMI2
NET1
TUBAL3
CFDP1
SPATA33
DYRK1B
DCAF4
FBXO33
FAM72C
SMYD5
RPP40
LOC101928764
MFSD1
CNPY3
TWNK
MRPL43
LZTS2
TOP1MT
SLC39A2
METTL17
USP49
PGBD5
FBXL13
ARMC10
SMG8
BCAS2
DENND2C
RHEBL1
KMT2D
MDM1
RRP12
INKA2
DDX20
GFPT1
MRPL21
IGHMBP2
SLC25A19
GPR61
GNAI3
KIF14
TMEM67
NBPF1
WDR61
ZHX1-C8orf76
ZHX1
RMDN1
CPNE3
KMT5A
ZNF789
ATP5MF-PTCD1
ATP5MF
NCAPH
ITPRIPL1
NAGPA
AP3B2
ESPL1
TTLL5
ERG28
ATG7
ARRDC4
SRGAP2
FAM72A
CSTF1
AURKA
IFT22
SKIV2L
NELFE
SQLE
CLBA1
AHNAK2
DLGAP5
ACTR6
MYL12A
MYL12B
POLR3GL
LIX1L
ANKRD34A
SH3BGR
LCA5L
NKX1-1
NEMP1
IFT172
GCKR
FNDC4
TAF1C
ADAD2
NAA35
DUX4
SKA3
MRPL57
WIPI1
MRPS21
CYP46A1
NME1-NME2
NME1
RTF2
LSG1
MAPK8IP3
RRM2
POLQ
DSCC1
SPC25
STYXL1
RIDA
POP1
POLR2J2
LRPPRC
NOTCH2NLC
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
BOLA2-SMG1P6
RAB22A
KNOP1
IQCK
VCPKMT
KCNJ14
GRWD1
SRPRB
DUS2
DPEP2NB
DDX28
ANGEL1
GRB2
CKAP2L
WDR46
RGL2
PFDN6
RBM48
PEX1
SLC25A44
MAPK8IP2
AP4E1
NUF2
GFOD2
TM2D3
CCDC146
TRIM45
NHP2
THADA
NOL8
CENPP
FAM207A
SLC25A24
DNAH7
ZNF408
ARHGAP1
GPN1
CCDC121
IDH3A
FAAP24
CEP89
ABCA5
VANGL1
WASHC2A
AOPEP
FAM174A
RNASEH1
PUF60
WDR25
WARS1
TPTE
POLR2J
AUH
TMED8
SAMD15
DDX49
COPE
FAM227B
DTWD1
TBC1D30
GNS
DDX42
CCDC47
TMEM186
PMM2
LYSMD2
SLC35A2
PIM2
ZC3H18
COG7
C12orf45
CDC37
ADCK1
SAXO2
EFL1
IFT88
GNG14
FBXW9
PRPF18
FIS1
KLF10
CLDN15
C20orf27
GPR146
HRH3
FCF1
AREL1
CACNG4
TMEM262
ZFPL1
CDCA5
URB1
LZTFL1
ZHX3
PDXDC1
RPL7A
MED22
SURF2
SURF1
QTRT1
TMEM150A
RNF181
USP39
C2orf68
ASNS
RFC2
DUSP15
NUP214
SPG7
ORAI2
XRCC2
TTK
CEP55
TSEN2
ATR
SEC13
SRGAP2C
FAM72B
NOL6
UNC45B
NLE1
ZMYND8
SARS1
C11orf49
SF3B2
GAL3ST3
CSDE1
WIPI2
PUS7
RINT1
PLEKHM3
CRELD1
TDRD7
TBC1D15
CLTC
GOLGA3
CENPBD1
NOTCH2
ENTPD5
BBOF1
NUP107
TPRA1
MCM2
WDR47
TCF19
POU5F1
CCHCR1
SPATA2
CCT5
ATPSCKMT
YIPF4
COPS3
ACOX3
PREX1
USP10
PYCR3
GFUS
FANK1
ATP6V0D1
AGRP
GOLGA5
INTS8
METTL2B
PSMD12
PIP4P2
DZIP3
CIP2A
WASHC2C
WDR35
TSEN54
LLGL2
CASKIN2
RUVBL1
SPOP
NBPF12
VPS11
ZNF79
TMEM109
PRPF19
ZNHIT1
PLOD3
IPO11
DIMT1
TCTN2
DPY19L4
GPR89B
FANCE
ATP1A1
PLBD2
SYVN1
VAPB
PRMT5
CARD19
RBM23
WDR43
PSMG4
TCTEX1D2
VPS33A
XRN2
CDIPT
CYP2W1
COX19
CNOT4
FRAT1
BSPRY
ANKRD46
VARS1
PTPN1
WDR77
ATP5PB
YIF1A
TMEM151A
TRMT44
WDR59
TCP11L2
MKS1
PI4KB
TMEM251
MOAP1
RAD18
TMEM18
YPEL3
TBX6
UTP23
DIAPH3
DUS4L-BCAP29
DUS4L
COG5
PSMB7
TRMT61B
PTPRH
DCAF7
TF
TOPBP1
PHLPP2
DENND4A
PRR5L
COMMD9
POLE3
C9orf43
ALAD
NSUN5
PLCG1
GNA13
CENPW
CMC2
CENPN
CDT1
CLNS1A
APRT
SPTLC2
SKA2
PRR11
ZC3H3
PRKAB1
TBC1D13
GALK1
AP1G1
STOML1
PML
TTLL4
TATDN1
NDUFB9
CBLL1
HNRNPH1
THBS3
MTX1
KLHL36
ZFAND2A
TP53INP1
GABPB1
PDE4DIP
SCFD2
CORO1A
NCKAP5L
FAM161B
COQ6
RASA4B
INSM2
TADA2B
CCDC96
ECT2
POLR2G
TAF6L
E2F7
GKAP1
POLR2K
SPAG1
HEATR1
FBXO43
UBFD1
EARS2
HM13
PCYT1A
BLM
CEP128
PPIL1
INCENP
TUBB3
MC1R
FAM183A
CDK7
MRPS23
TMEM120B
HSPA5
TRPM7
L2HGDH
DMAC2L
GOLPH3L
SLC22A15
TSFM
SEC22B
DOK3
DDX41
USP54
TUFT1
LRWD1
ALKBH4
DENND4B
COMMD4
NOMO3
NOMO2
ABCC6
NOP9
DHRS1
LTB4R2
CEP112
SLC4A8
SPATA25
ZSWIM1
NEURL2
CTSA
GTSE1
THAP10
LRRC49
PIAS3
TARBP2
MAP3K12
SRGAP2B
FAM72D
EIF2D
DNAJC25-GNG10
DNAJC25
RGS14
LMAN2
ITSN2
EEF1E1
SLC7A6OS
PRMT7
LTV1
SPPL2A
CIART
TTC26
MED20
BYSL
NUB1
RAB5B
PMEL
CDK2
METTL6
EAF1
PLEKHO1
FAM185A
MLEC
AJUBA
BMT2
NAGK
NKIRAS1
NR1D2
LACTB
IKZF5
ACADSB
DSTYK
NUP160
GPSM1
SEC22A
CARD9
RMND5B
NUFIP1
GPALPP1
FAHD2A
AHI1
MRPL33
UBE2C
ZBTB9
ZMAT3
CPSF1
SLC39A4
ZNF76
PDZD2
USP30
NOLC1
SLC5A6
CAD
ATRAID
WDR26
NOM1
TOMM70
LNP1
MARCHF10
AP5Z1
VMP1
PTRH2
ZFYVE26
RAD51B
TOX4
RAB2B
CCNDBP1
KIFC1
KLHL32
PIP4P1
OSGEP
APEX1
NDUFAF4
ASB8
PFDN5
MYG1
TCOF1
RRM2B
MTPN
LUZP6
MON2
PNP
PROX2
RBM28
RABIF
TMOD2
MYO5C
SPDYE7P
POM121
USP2
CRCP
TOLLIP
CLCN7
RASA2
CFAP54
CAPZA2
LAMTOR1
ANAPC15
TMEM214
VAC14
GPR89A
SEL1L
MFN1
NME2
TDG
C12orf73
OSBPL8
TECPR1
RNF216
INTS1
HAT1
MTIF2
CHURC1-FNTB
CHURC1
RRP36
MEA1
KLHDC3
MTHFD1L
TBK1
XPO4
ZFP41
RBM19
TAF13
TOP1
ZNRD2
FAM89B
EHBP1L1
LRP10
RFC3
CENPB
CDC25B
RIOK3
SPEF1
KLHL12
PSRC1
GDPGP1
CIB1
DBR1
VIRMA
DPY30
CCS
CCDC87
ELK4
PPRC1
SSBP1
KDM5B
GTPBP4
EIF2S1
ATP6V1D
PIF1
SMG5
ZNF706
VHLL
GLMP
NAPEPLD
MTRNR2L2
MSH3
DHFR
TAF5
CFAP69
WDR93
PEX11A
VAMP5
VAMP8
P2RY11
PPAN-P2RY11
PPAN
ANGPTL6
MARCHF8
TRIAP1
COX6A1
USP14
VPS53
ADAM17
FURIN
ZC3HC1
IREB2
TPD52L2
RCE1
ABHD16B
WDR20
HSP90AA1
RFX5
NEPRO
MMUT
CENPQ
NOMO1
URM1
PSMA5
DPH7
SPOUT1
ICAM2
PRR29
AXDND1
NBPF11
PRMT6
RFC5
SPICE1
CHID1
CNNM3
CCNB1
WFDC3
DNTTIP1
CCDC34
EBAG9
GMCL1
TMEM9B
KRIT1
ANKIB1
TTC23L
ATP5MG
COQ2
USP8
ESD
CMBL
PAK2
SKA1
AEN
ZNF23
KLHL24
LSM14B
RABGEF1
ZZEF1
CYB5D2
CALCOCO2
KIF6
ZSCAN21
RIN1
BRMS1
B4GAT1
ATP5F1E
PRELID3B
NOL10
INIP
CCDC59
HILPDA
SLC25A13
SSR2
OS9
IARS1
MXD1
TDRKH
RIPK2
SV2A
CYP51A1
PRKCI
BOLA1
CPEB4
STRADA
LOC112694756
MAN2B2
G2E3
DMXL2
ZNF131
MAPK6
C8orf33
RNASEH2A
PRDX2
ANKRD42
SAC3D1
GPSM2
NEK10
EFCAB12
OVOL2
TPRN
TMEM203
NDOR1
TFPT
PRPF31
VPS13B
SSNA1
ANAPC2
MACROD1
PSMB4
GPATCH4
NAXE
POLR1B
C5orf51
MFSD5
TMEM170A
EML1
LRRC24
PNO1
RECQL4
LRRC14
MFSD3
OXNAD1
DPH3
BCAS1
GLG1
ECHS1
KLF15
LSS
ADAT1
LRFN4
WWP2
NOB1
CYB5R1
ADIPOR1
SLC35C2
NBN
CSRNP2
TIPARP
OTULIN
FSD1L
CALB1
SUMO1
EBNA1BP2
CFAP57
MED13
KIAA1586
BET1
CUL2
LYRM4
FARS2
WDR81
FBXL3
KATNIP
GTF3C1
PRKAA1
EXOC3L1
E2F4
KIAA0895L
NOTCH2NLA
FAM13B
ELMO3
EDC4
H1-10
ZNF623
ANKRD60
TICRR
CRNKL1
CFAP61
RIPPLY2
CYB5R4
SFSWAP
FPGS
ENPP3
MED23
CKAP5
SH2D3C
SWI5
GOLGA2