ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089498 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX017703: CD4+ T cells

◢ SRX687554: Erythroid progenitors

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◣ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX5162252: Placenta

◢ SRX5162253: Placenta

◢ SRX5162254: Placenta

◢ SRX4313223: RH-4

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

PSMD6
BCAS3
HEATR6
NPAS4
TRIM37
PFDN4
HTR5A
TUBD1
RPS6KB1
BRIP1
DYNLRB2
TEX14
RAD51C
SLC12A9
KPNA2
CA4
ARFGEF2
APPBP2
TTC24
IQGAP3
USP32
BMP7
RNFT1
RFC3
FBXO32
POLR2J3
SIKE1
SKA3
MRPL57
ALKBH2
UNG
TSR3
GNPTG
SCRT1
DGAT1
NCAPH
ITPRIPL1
BCAS4
BARHL1
DCLRE1B
AP4B1
C12orf66
HIPK1
FANCD2
PPM1D
DZIP3
CIP2A
NCOA3
UTP20
MAD1L1
NUDT1
MRM2
IQSEC3
TRIP13
BRD9
OAZ3
MRPL9
DSCC1
ATXN7
PPM1E
RABL2A
SLC37A1
RSPH1
L1CAM
SRGAP2C
FAM72B
SGO1
KCNH6
RRP15
XKR7
PARD6B
BCAS1
KCNJ14
GRWD1
FAM72C
ZNF217
CREBRF
POLQ
POLR3GL
LIX1L
ANKRD34A
SUMF1
ZNF331
SRGAP2B
FAM72D
RNF166
CTU2
SMG8
NEIL3
DHX40
C3orf14
CSTF1
AURKA
XRCC2
C16orf46
YPEL2
CKAP2L
ATXN1L
SAP30BP
RECQL5
MTFR2
TMEM262
ZFPL1
CDCA5
SMC2
CCNB1
CYB561D1
ATXN7L2
CPLX2
ESPL1
CCDC86
KIF14
TTF2
UBE2C
SKA2
PRR11
RAD54B
NET1
TUBAL3
NOL8
CENPP
BIRC5
CRBN
INKA2
DDX20
HSF1
BOP1
SPATA25
ZSWIM1
NEURL2
CTSA
RACGAP1
TROAP
WIPI1
MCM7
AP4M1
WASHC5
NSMCE2
PRCP
DDIAS
METTL1
EEF1AKMT3
CYP27B1
FANCI
ZNF696
RAB22A
SMIM41
ATG101
RNF40
CCDC189
NTAQ1
INTS2
LZTFL1
CDC14B
UBE3D
DOP1A
ATG14
TRIM33
COG7
EDC3
BUB1
RMDN1
CPNE3
NOL6
TMEM249
SLC52A2
FBXL6
NUF2
RRP12
CCT2
TTLL11
GFPT1
TRMT61A
CKB
GFOD2
TTC27
HSDL1
DNAAF1
MCM10
ATP5F1E
PRELID3B
NEMP1
BICDL1
CEP128
PGBD5
SRGAP2
FAM72A
MFSD1
TTK
FOXH1
PPP1R16A
METTL2A
NAGPA
TONSL
MOK
MYBL2
C8orf33
TOP1MT
EXO1
URB1
AP3B2
INSM2
PIGU
MAPK8IP2
CENPBD1
AP4E1
TICRR
ZAR1L
BRCA2
GTPBP4
CCNA2
MED20
BYSL
TBX2
NRAS
TM9SF1
IPO4
NUP107
DUX4
RABL2B
GTF2H3
EIF2B1
KIFC1
DYNC2I1
ACOX3
RAD9A
PPP1CA
RRM2
NME1-NME2
NME1
NHP2
MIS18A
LTV1
SPEF2
TMEM208
LRRC29
DHX37
BRI3BP
TWNK
MRPL43
LZTS2
POLR2K
SPAG1
FBXO43
TMOD3
PHTF1
DNAH7
NOMO3
NOMO2
ABCC6
ABCA5
SMYD5
ZHX1-C8orf76
ZHX1
RHEBL1
KMT2D
RPP38
ACBD7
KLHDC4
WDR43
STOML1
PML
QSOX2
NDUFAF6
VRK1
CCNE2
LRRC24
RECQL4
LRRC14
MFSD3
IARS1
CPSF1
SLC39A4
EEF1E1
ZC3H18
ZNF79
WDR4
MYL12A
MYL12B
SQLE
EIF2D
NDUFV1
ZNF23
FAM207A
THOC7
RTF2
FAM227B
DTWD1
NAA35
TCF19
POU5F1
CCHCR1
SPTLC1
ZMYND8
RPP40
DEPDC1B
VAPB
DLGAP5
KIF20A
BRD8
CEP55
TUBB3
MC1R
ASPM
SARS1
RAD18
METTL3
NKX1-1
ATP6V1C1
FRAT2
MON2
GTSE1
NPM1
SHCBP1
EIF3C
EIF3CL
KLHL36
ZFYVE1
RTKN2
PRPF18
HCFC2
GLT8D2
CORO7-PAM16
CORO7
DNAJA3
POC5
P2RY11
PPAN-P2RY11
PPAN
ANGPTL6
TACO1
GGH
ZFAND2A
RRP1
PSMD4
CENPB
CDC25B
MRPS23
RNF114
SNRPE
ZHX3
FEZ2
AEN
TBC1D30
GNS
NUB1
C11orf49
PRMT6
MED6
TTC26
OS9
FAM214A
BLM
TOP1
PLEKHM3
ERN1
DCAF4
PCOTH
MIPEP
C1QTNF9B
FBXO5
CCNG2
ZNF688
DBNDD2
CMC2
CENPN
RFC1
PLK4
ENTPD5
BBOF1
PLCG1
TMEM186
PMM2
PUF60
SPC25
MARS2
AMIGO1
AARS2
BCAS2
HEXA
SLC35B1
MCRS1
WDR47
TCTN2
NOMO1
LOC101928764
FBXW8
SMIM5
EIF2S1
ATP6V1D
CLTC
RAD51
MOCS3
DPM1
RXYLT1
HEATR5A
DENND2C
AOPEP
ATP5MG
TDRKH
NEK11
ASTE1
TMEM231
GABARAPL2
FANCC
TBC1D13
URM1
ETFDH
C4orf46
WDR59
ARMC2
CLBA1
AHNAK2
PSMA5
PRR5L
COMMD9
SECISBP2
CKS2
ZBTB9
PARPBP
NUP37
CIT
CFAP69
IFT22
PLK1
EXOC3L1
E2F4
KIAA0895L
ELMO3
DDX11
VAC14
CCT5
ATPSCKMT
PSMB7
DPY19L4
VPS13B
IFT88
NIPSNAP3A
ATXN3
CDC25A
PRMT2
AP5Z1
VANGL1
WDR3
GDAP2
PRKAB1
CCDC150
DUS4L-BCAP29
DUS4L
COG5
EIF3E
SH3BGR
LCA5L
RMI2
MARCHF10
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
BOLA2-SMG1P6
IPO11
DIMT1
MTMR14
NPIPB15
ANGEL1
ANAPC7
ZNF367
ROPN1L
CHCHD3
RRM2B
ATP6V0D1
AGRP
YWHAG
XPO4
ACTR6
FIS1
CLDN15
TMEM183A
SGO2
PTRHD1
CENPO
TRMT1
NACC1
KAT2B
HGH1
MROH1
FAM240C
PIP4K2C
TUFT1
AXDND1
FARSB
TEDC2
GATB
TRIAP1
COX6A1
CFDP1
GALK1
AUH
SPNS1
LAT
PUS1
SEC22A
RIPOR3
C16orf71
ANKS3
AGFG2
CYB561
NOTCH2NLB
GRB2
QTRT1
STAT1
CORO1A
MRPL27
EME1
DUS2
DPEP2NB
DDX28
NBPF1
ZNF408
ARHGAP1
NBPF11
L2HGDH
DMAC2L
ATAD2
VARS1
ASF1B
C1orf54
APH1A
ATG7
ATP1A1
SPRYD3
HMGB1
RNASEH1
SAXO2
EFL1
WDHD1
SOCS4
DYRK1B
TMEM67
SNAP25
TSEN2
UGGT1
METTL2B
RIOK1
CAGE1
WDR35
TAF13
ZNF530
TPRA1
MCM2
CHD1L
PRKAB2
PHLPP2
USP8
HMGCS1
PTPN1
STYXL1
PSMC2
DNAJC2
TMEM109
PRPF19
MELK
RPL7A
MED22
SURF2
SURF1
MBTPS1
ZNF622
VPS50
HEPACAM2
INIP
USP54
RBM28
CLCC1
CDIPT
SPATA33
TEX10
SENP5
RPS29
LRR1
WASHC2A
FCF1
AREL1
DCAF7
HELZ
CENPA
KLHL20
TPTE
CENPW
GOLGA5
CSRNP2
ZNF789
ATP5MF-PTCD1
ATP5MF
RABIF
GOLGA3
MET
DUSP15
TASP1
TRAPPC10
EXOC5
AP5M1
NUP35
RNASEH2A
PRDX2
HEATR5B
GPATCH11
TTLL5
ERG28
NGRN
TSFM
KDM5B
INTS1
BBS1
MDM4
NOTCH2
TBC1D31
MED13
CSDE1
COPS3
FBXW2
RCN2
REXO4
ADAMTS13
LSM14B
BSPRY
MND1
RPIA
LRPPRC
MRPS21
RABEPK
HASPIN
EBAG9
NXF1
STRIP1
TEKT2
ADPRS
SLC25A19
PSMD12
PRKAR1A
ZGPAT
ARFRP1
CDK1
RBM48
PEX1
C12orf45
RGS14
LMAN2
VPS53
RMDN3
GCHFR
RIOK3
NOL11
METTL6
EAF1
NME2
TRIM14
GREB1
MTRNR2L2
MSH3
DHFR
SCFD2
RTEL1
STMN3
MRPL3
RHNO1
FOXM1
LTO1
ADCK1
SAMD10
PRPF6
CRNKL1
CFAP61
NARS2
KLF10
HAT1
ATR
GLE1
MFSD5
DPH7
OSTM1
FSD1L
CUL2
COMMD4
SLC25A26
SPPL2A
VWA3B
DYNC1I2
RPLP0
GCN1
C14orf28
TFF1
PDXDC1
MTPN
LUZP6
CYP51A1
PREX1
MAPKAP1
CNPY3
RAE1
MTRNR2L3
CLCN7
CAMSAP2
CHRNA5
PRPF39
CCDC90B
TM2D3
MLYCD
POLR2J2
IMP4
CCDC115
FAM13B
MXD4
RPL30
TUT7
SLC22A5
PDSS1
ZNHIT1
PLOD3
LPIN1
NTSR2
SNRPD1
TAMM41
TEX2
WDR74
STX5
KLHL32
THADA
GPR61
GNAI3
NDUFAF4
ADAT1
KCTD13
NANS
SDAD1
POLR2J
TRMT44
VPS45
SRD5A1
SLC45A3
CCDC146
ZGLP1
FDX2
HM13
ASNS
RPL32
RIF1
GTPBP10
PEPD
DNAAF4
REXO5
ERI2
CHFR
GOLGA7B
RSL1D1
VPS9D1
UBXN11
MAPK8IP3
PWP1
DNAJC25-GNG10
DNAJC25
POLD3
MACROD1
NOP9
DHRS1
LTB4R2
WDR70
NUP155
RBSN
TMED9
B4GALT7
SPG7
WIPI2
NFATC2IP
GSC2
PIP4P2
SH3GLB2
MIGA2
NEK10
MYO5C
ZDHHC22
MARCHF8
ZSCAN2
WDR81
CCND3
PDPR
PRIM2
SPATA2
WDR77
ATP5PB
PTPRCAP
AMZ2
TCP11L1
EMC8
COX4I1
CORO1B
CABP4
GPR152
C6orf89
PES1
TAF5
PWP2
LOC102724159
CDT1
APRT
SAC3D1
ANKRD28
ABTB1
MAD2L1
DNA2
FAM180B
NDUFS3
KBTBD4
SNAPC4
SFSWAP
UBFD1
EARS2
DDX19A
PYCR3
GFUS
TTLL4
AP1M1
MAPKAPK5
FBXL13
ARMC10
PIF1
PIMREG
AIPL1
NOTCH2NLA
SV2A
GDPGP1
CIB1
MTMR11
SF3B4
GAR1
MYBL1
ANKRD46
PMPCB
ARL6IP1
TCOF1
ZC3H3
RPS16
SUPT5H
BRD3OS
TADA2B
CCDC96
RUVBL1
SRPRB
ANKRD42
POLL
DPCD
GOSR2
PI4KB
INTS4
SS18L1
PSMA7
SMARCD1
RAD54L
NUDT2
KIF24
POLE3
C9orf43
ALAD
LARP4
FAM186A
ORAI2
RAB7A
KIF18B
METTL18
C1orf112
PNPLA8
WWP2
NOB1
RNF115
POLR3C
MARS1
ARHGAP9
RIDA
POP1
SF3B2
GAL3ST3
KXD1
PRMT3
SETDB1
HSPA5
CS
FANCE
NDUFB2
IFRD1
GSTO2
TRIP6
SRRT
VPS33A
UTP23
DIAPH3
MMUT
CENPQ
ZEB1
NBN
XPO6
ROM1
EML3
B3GAT3
DYNLL2
S100A13
S100A1
CHTOP
ZNF778
PUM3
RGS20
ATP6V1H
INPP5K
CNTRL
C5
P2RY2
CYP27C1
ESCO2
KNOP1
IQCK
PUS7
RINT1
TMEM129
TACC3
SLBP
CFAP206
ZNF107
UTP4
DERPC
CHTF8
SWI5
GOLGA2
CDK5RAP2
SNX4
SAR1A
GPR89A
DDX46
ECT2
LRFN4
FAM174A
DERL1
CANX
KCNC1
PMS2
AIMP2
NUFIP1
GPALPP1
ARFGAP1
TF
TOPBP1
UCHL5
RO60
ETFRF1
CFAP94
RBM19
KIF11
CREB3L2
SHOX2
ARSG
RSRC1
RIPK2
RANBP6
KIAA2026
SLC16A6
MAN2B2
LEO1
FANCA
NEK2
WASHC2C
CENPE
CENPH
NGDN
PTPRH
HJURP
MMS22L
C11orf24
THAP10
LRRC49
PSMB4
GNG14
FBXW9
NAA25
RRP36
MEA1
KLHDC3
ATG16L1
KCTD5
MRPL21
IGHMBP2
NSDHL
CETN2
ARHGEF35
PALLD
QTRT2
CCDC191
XRN2
CCDC34
IFT46
ARCN1