ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX116422 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX017703: CD4+ T cells

◢ SRX687554: Erythroid progenitors

◢ SRX116421: K-562

◣ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX5162252: Placenta

◢ SRX5162253: Placenta

◢ SRX5162254: Placenta

◢ SRX4313223: RH-4

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

NPAS4
HTR5A
FBXO5
UTP20
NKX1-1
LIN28A
SUMF1
XKR7
MTFR2
RAD51
RBM19
UTP25
CCNB2
RRM2
RTBDN
MAST1
SGO1
EXO1
PIGU
VARS1
UFD1
CDC45
NEIL3
NUF2
QTRT1
KIAA0895
ANLN
KCNJ14
GRWD1
KLHL18
KIF9
NCLN
S1PR4
TRMT1
NACC1
XRCC2
NUP214
NCAPH
ITPRIPL1
RRP15
TTC24
IQGAP3
WDR4
GPN2
GPATCH3
NEK2
CCNA2
SHCBP1
TRIP13
BRD9
IQSEC3
GPATCH4
NAXE
ALKBH2
UNG
DDX31
GTF3C4
DPH2
B4GALT2
ATP6V0B
CFAP299
WDR74
STX5
CRNKL1
CFAP61
RAD54L
DNA2
RRP12
ESCO2
BLM
FANCI
C12orf66
PPIL2
DHX37
BRI3BP
KIF2C
PRR5L
COMMD9
NOL7
EBNA1BP2
CFAP57
TROAP
URB1
CKAP2L
URB2
TAF5L
RRS1
ADHFE1
PGBD5
KAT2B
MND1
LMLN2
CEBPE
C16orf71
ANKS3
MAPK8IP2
BUB1B
DUSP15
TOMM40
INTS7
DTL
BIRC5
KIF15
KIAA1143
PMS2
AIMP2
TICRR
EXOSC5
BCKDHA
ODF2
SPNS1
LAT
PLK4
CDC6
TTK
L1CAM
MOK
CKMT1A
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
BOLA2-SMG1P6
CCNB1
RNF40
CCDC189
KIF18B
SMTN
TTC27
GATB
KIFC1
SRGAP2C
FAM72B
BARHL1
C16orf46
METTL1
EEF1AKMT3
CYP27B1
MIS18A
STIL
SMYD5
NAGPA
POU2F1
SUPV3L1
HSPA9
GNG14
FBXW9
FAM72C
SRGAP2B
FAM72D
NOL6
CCT2
PPIP5K1
CKMT1B
ZNF688
NEU1
LTV1
CORO1A
SLC7A5
ZC3H18
CDK7
IREB2
KIF20A
BRD8
DCAF4
SCRT1
DGAT1
INSM2
TEKT2
ADPRS
RIPPLY2
CYB5R4
TADA2B
CCDC96
POC5
POLR1B
SKA3
MRPL57
RABL2B
P2RY11
PPAN-P2RY11
PPAN
ANGPTL6
SPC25
DBNL
DLGAP3
ACOX3
UBXN11
TAF13
PBK
SMC2
WDR46
RGL2
PFDN6
SRGAP2
FAM72A
CCDC86
EDC3
CA4
KNL1
CELSR3
FANCD2
CRKL
SCFD2
VPS33A
KRI1
CDKN2D
CENPW
NOL8
CENPP
PPFIA3
C19orf73
IFT172
GCKR
FNDC4
AGFG2
AXDND1
CENPE
CDC25A
SPTAN1
PRCP
DDIAS
AURKB
SMIM17
TTF2
MARCHF8
SETD4
CBR1
SNRPD1
PUS1
SMC4
IFT80
MRPS18B
ATAT1
TTC26
GNL2
NUDT15
SPIRE2
DLGAP5
NOM1
CCNG2
RPP40
TMED5
CCDC18
ADK
AP3M1
DHRS11
MRM1
SLC12A9
MDN1
CASP8AP2
RAD18
RNF166
CTU2
FARSB
PTPRH
CFAP410
LRGUK
WDR62
THAP8
WASHC2A
USP2
MAD2L1
CCDC113
LZTFL1
FAM53C
CDC25C
ARHGAP11A-SCG5
ARHGAP11A
RABL2A
CDK1
DZIP3
CIP2A
ZNF593
CNKSR1
C1orf232
FAM24A
PARG
KIF14
TRMT61A
CKB
CDCA8
C1orf109
EIF2D
CYB561D1
WASHC2C
NBPF1
HMGB2
TMEM262
ZFPL1
CDCA5
DERL3
CPLX2
TMEM248
PHB2
QSOX2
PWP1
UBFD1
EARS2
ZWINT
NOP16
HIGD2A
HSDL1
DNAAF1
KLF1
GCDH
DNASE2
TTC30A
DYNC2I2
SNRPD2
QPCTL
MYBL2
COP1
HMGB1
TRMT6
MCM8
TCF19
POU5F1
CCHCR1
CEP55
UBN2
PUM3
RPSA
CLSPN
H4C2
H3C2
H2AC4
ANKHD1-EIF4EBP3
ANKHD1
POLQ
DDX21
TFB2M
CNST
LRP8
OIP5
NUSAP1
C1QBP
CENPS-CORT
CENPS
FBXL13
ARMC10
ZGLP1
FDX2
SPCS1
GLT8D1
SLC19A1
SDF2L1
SRM
EPN1
MRPL40
HIRA
THADA
UTP15
ANKRA2
SKA1
ZNHIT6
DIAPH3
LSM5
AVL9
PPP1R13L
POLR1G
DYNC2I1
PDXK
TRAPPC6A
BLOC1S3
CEP135
AUNIP
MRTO4
EMC1
COG7
NME1-NME2
NME1
CEP43
PNPT1
PPP1R12B
UBE2T
MON1A
ZNF74
TRIP12
FBXO36
ATAD2
EPHA10
TBRG4
MCM7
AP4M1
SLC25A1
ATP6V0D1
AGRP
SNX8
YEATS4
DUT
TPH2
RNASEH1
PSMD14
DSCC1
CSNK1G1
ULK4
EIF4EBP1
PLK1
DYNLL1
FAM200B
PPT1
GSC2
PDSS1
SPC24
VRK1
DDX19A
PSME3
BECN1
SYT5
MTRNR2L2
MSH3
DHFR
IPO11
DIMT1
KCTD9
CDCA2
SAR1B
CNOT4
ATP5MC1
DDX49
COPE
ACTR6
DDX11
PEPD
PTPRU
MECR
ZGRF1
LARP7
MCM10
WDR61
PRPF38A
ORC1
TIGAR
PAQR4
KREMEN2
NPM1
NDC80
METTL4
TMEM150A
RNF181
USP39
C2orf68
KNOP1
IQCK
ZSWIM9
LIG1
HAUS7
TIGD5
EEF1D
MRPL1
PRMT1
PC
CDC37
SLC5A6
CAD
ATRAID
CDC7
UBE2L3
RIMBP3C
RIMBP3B
FKBP3
FANCM
TRAIP
MNS1
HPCA
MPHOSPH10
MCEE
MARS2
PRAME
CR1L
RHCE
MACO1
DHX16
NUDCD3
TIMM44
VPS50
HEPACAM2
TMEM186
PMM2
PRMT2
DEPDC1
CDKN2C
FAF1
RIMBP3
TM9SF1
IPO4
MFSD1
NUP35
ESPL1
POMZP3
POLR1F
RER1
MORN1
GTF2H3
EIF2B1
HCFC2
GLT8D2
CENPH
TSFM
TIMM23
GTSE1
CRCP
MAK
KIF5C
SLC39A6
HAGH
FAHD1
IQUB
LYRM4
FARS2
KTI12
SLC38A7
LTN1
CCDC116
SECISBP2
CKS2
MTR
CEP162
PCOTH
MIPEP
C1QTNF9B
SYNJ1
DDX42
CCDC47
PDE8A
CENPM
ING3
MRPS28
CMC2
CENPN
ZAR1L
BRCA2
SHC1
FLAD1
CKS1B
ASF1B
DPP3
C6orf89
PPIL1
ZNF239
ENDOV
C5orf34
DNAJC6
ZNF358
MCOLN1
DYNC2LI1
RCC1
PPID
RPUSD4
FAM118B
MAP3K7
MRPS2
C9orf116
ZNF530
HEXA
LSM12
G6PC3
NOS3
TOP3B
LRRC24
RECQL4
LRRC14
MFSD3
E2F3
GFM1
CCDC15
CHRM4
WFDC3
DNTTIP1
GAR1
CLCC1
UBIAD1
RPUSD2
CCDC32
SNRPE
C12orf43
ASPM
GPR107
FNBP1
RAB37
GMNN
EIF4H
DUX4
RHEBL1
KMT2D
HEATR1
HROB
MAN2B2
SGO2
MRPL27
EME1
MED15
ANAPC1
ECSIT
CNN1
BBS12
ZC3HC1
CCDC146
THOC3
MTF1
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
LARS2
RMC1
DUS3L
PRR22
DGCR2
TSSK2
PDIK1L
SSBP1
YIF1A
TMEM151A
ZWILCH
SNAPC5
RPL4
GPD1
COX14
DISP2
PHGR1
TPX2
FANCE
FBXO48
APLF
SNX33
IMP3
C16orf89
ALG1
MED20
BYSL
BBS5
PARPBP
NUP37
MRPL4
FKBP1A
QTRT2
CCDC191
ACOT7
MYBBP1A
GGT6
FOSB
TOM1
CBWD5
PPM1F
NUDT2
KIF24
WDR27
C6orf120
AKR1A1
NAT10
HSP90AB1
SLC35B2
CREB3L2
UTP23
UROD
HECTD3
NADSYN1
DHCR7
PDE4C
C22orf39
NOMO3
NOMO1
PPA1
PNO1
ZNF92
SCAP
ZC3H15
ZNF485
ATR
XPO5
POLH
EIF3M
CALCOCO1
SPATA4
ZBTB9
NUB1
GPAM
TDP1
EFCAB11
IARS1
TSEN2
DBNDD2
ANAPC10
ABCE1
DNAJC11
NECAP2
DNAH7
RBKS
BABAM2
B3GNTL1
IQCH
AAGAB
PDCD2L
GTPBP4
EXOC2
MIIP
POC1A
SFXN2
ARL3
KCNAB2
TMEM120B
SASS6
FPGS
SUGP2
ARMC6
RAB41
PDZD11
KIF4A
FZR1
DOHH
C12orf45
TSEN54
LLGL2
CASKIN2
LSS
AP5Z1
LIM2
UGGT1
ATG14
ARL8B
RCCD1
TMEM175
GAK
CEP295
VAC14
CBWD3
CBWD6
SH3BGR
LCA5L
WDR73
NMB
ING2
DUS4L-BCAP29
DUS4L
COG5
PSMG4
PIMREG
AIPL1
FAM174A
ZNF683
NT5DC3
RAB42
NCAPG
FANCF
RSPH3
REEP6
PCSK4
SND1
ZNF726
TWNK
MRPL43
LZTS2
CENPB
CDC25B
SPEF1
CCDC90B
MOSPD2
FANCB
RRP1
RBM28
CENPF
TMEM191C
ZSCAN2
LARP4
FAM186A
CHCHD3
SLC25A16
EXOSC3
RTF1
METTL18
C1orf112
ARMC2
TOP1
RRP9
PARP3
STAM2
ZNF771
TTC12
TMEM191B
GGTLC3
TOMM22
ZNF76
BIN3
NUP205
ZCCHC7
LSG1
SMN2
SMN1
HPS3
CADM3
CSTF1
AURKA
NOL10
PCNT
C21orf58
TRMT2A
RANBP1
MAK16
RIOK3
GGH
PABPC1
HSPBP1
BRSK1
TAF4B
SMIM41
ATG101
CHCHD1
ZSWIM8
RPL6
PTPN11
RDH5
ITGA7
BLOC1S1
PSRC1
SEC16A
C9orf163
RIN1
BRMS1
B4GAT1
NPIPB15
THAP7
CRLF3
ATAD5
SCN3B
FAAP20
WIPI1
MZF1
KLHL12
SLC39A11
POLR3D
VTA1
NMBR
RPIA
ELOVL1
CDC20
HJURP
YIPF3
POLR1C
LRRC73
ZNF446
ZNF324
LOC389831
PIAS1
TTC4
TSR3
GNPTG
DARS2
CENPL
SRSF7
TRIM14
LZTR1
RTN4RL1
DPH1
MTCH1
SYS1
UBXN10
PLA2G2C
NDUFAF6
CCNE2
SLC35A2
PIM2
DUSP23
ZDHHC3
EXOSC7
TTC30B
TRIP4
PCLAF
RNASEH2A
PRDX2
SPOUT1
ZNF888
CPNE9
MRPS16
DNAJC9
GP1BB
BRCA1
USP20
C9orf78
LONP1
CATSPERD
SAP30
LUC7L2
SLC25A33
EEF1E1
ZNF778
TRNT1
CTU1
RBM34
ATG16L1
TRAPPC2L
GALNS
SETD6
RTL10
GNB1L
TOR1A
NOC4L
DDX51
PUS7
RINT1
RPF2
DIABLO
NAGK
TRAPPC12
EIPR1
UMAD1
CCSAP
ERI3
CFAP43
SLC25A51
POLR1E
UNC45B
NLE1
MRPL24
XYLB
ICMT
HES3
ZNF529
MYO9B
HAUS8
TMEM101
IBA57
NIPA2
NAGS
PYY
C17orf97
GTPBP10
YPEL1
LCMT2
ADAL
HM13
PNPLA8
RBM6
CD320
ATP6V1C1
TTC13
SIRT3
PSMD13
LIN9
HAT1
LCAT
PSMB10
CTRL
OGG1
POLR2J2
WDR36
MRPS23
RUVBL1
COMMD4
RAD51AP1
C12orf4
ZNF107
ZFP91
LPXN
PISD
OVCA2
HIC1
SSBP2
TIMM10
SMTNL1
CHGB
TRUB2
COQ4
TCTN2
PIP4P1
OSGEP
APEX1
RPS16
SUPT5H
EEF1AKNMT
SNAP29
PI4KA
AEN
PKD1L3
DHODH
EIF3H
ENTPD5
BBOF1
LENEP
ERLIN2
MPHOSPH6
NRL
DCAF11
DDX46
POLL
DPCD
DHDDS
RCL1
TMEM222
DYNC1I2
ZMPSTE24
PAK1IP1
C6orf52
NUP93
TMCO2
SPRTN
EXOC8
TK1