ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089508 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX017703: CD4+ T cells

◢ SRX687554: Erythroid progenitors

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◣ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX5162252: Placenta

◢ SRX5162253: Placenta

◢ SRX5162254: Placenta

◢ SRX4313223: RH-4

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

DUX4
CNOT3
PTPRN2
EPN1
MTRNR2L8
MTRNR2L2
MSH3
DHFR
KIF5C
MAMDC2
MUC3A
FRG2
MTRNR2L1
COL23A1
RGPD2
RGPD1
FRG2C
RPEL1
ART1
RTEL1
STMN3
LOC102724770
DGCR6
NPAS4
HTR5A
BCAS3
UTP20
TTC24
IQGAP3
PSMD6
HEATR6
ALKBH2
UNG
TRIM37
XKR7
SGO1
FBXO5
NUF2
TUBD1
RPS6KB1
METTL1
EEF1AKMT3
CYP27B1
MTFR2
IQSEC3
NCAPH
ITPRIPL1
SLC12A9
RRP15
SUMF1
CCNA2
FANCD2
PFDN4
BRIP1
BIRC5
FANCI
C12orf66
TROAP
TRIP13
BRD9
RRP12
EXO1
FAM72C
DZIP3
CIP2A
SKA3
MRPL57
XRCC2
NKX1-1
NEIL3
TEX14
RAD51C
SRGAP2C
FAM72B
TICRR
MOK
SRGAP2B
FAM72D
TMEM262
SCRT1
DGAT1
KCNJ14
GRWD1
USP32
CRNKL1
CFAP61
SCFD2
CA4
ZFPL1
CDCA5
BARHL1
RRM2
QTRT1
DHX37
BRI3BP
TTC27
POLQ
CKAP2L
CCNB1
WDR4
ARFGEF2
BLM
DYNLRB2
TTK
SRGAP2
FAM72A
CPLX2
RAD51
RBM19
CCT2
TRMT1
NACC1
KIF18B
DLGAP5
CCDC86
MIS18A
SMYD5
CCNG2
NEK2
APPBP2
CRBN
SMC2
POLR2J3
UTP25
NAGPA
EDC3
CSTF1
AURKA
KIF20A
BRD8
RAD54L
LIN28A
WASHC5
NSMCE2
WDR74
STX5
TTF2
ESCO2
NME1-NME2
NME1
RTBDN
MAST1
SLX1B
SLX1A
BOLA2B
BOLA2
STAT1
NOL8
CENPP
SULT1A4
SULT1A3
MCM10
NOL6
TM9SF1
IPO4
TRMT61A
CKB
KPNA2
PARD6B
RABL2B
VARS1
URB1
FBXO32
NEMP1
WASHC2A
SHC1
PGBD5
MCM7
AP4M1
FLAD1
CKS1B
WASHC2C
RAD18
LTV1
HIPK1
KAT2B
L1CAM
RNF40
CCDC189
DCLRE1B
AP4B1
SMG8
BOLA2-SMG1P6
PRCP
DDIAS
GPATCH4
BUB1B
NAXE
TSR3
GNPTG
DCAF4
C16orf71
ANKS3
BCAS4
RNF166
CTU2
PPM1D
SHCBP1
INSM2
C16orf46
SMIM17
CDC25A
PIGU
KLHL18
KIF9
DSCC1
NCOA3
KIFC1
ZNF331
SGO2
ACOX3
CEP55
ZNF217
MAPK8IP2
UBE2C
RABL2A
DYNC2I1
CYB561D1
VPS50
HEPACAM2
TSFM
KIAA0895
SPATA25
KIF14
UFD1
CDC45
GTF2H3
EIF2B1
DHX40
NET1
SAP30BP
RECQL5
BMP7
EIF2D
SIKE1
ANLN
CREBRF
USP2
ZSWIM1
NEURL2
CTSA
PBK
NBPF1
MYBL2
SPNS1
LAT
CDC6
EBNA1BP2
CFAP57
MAD2L1
SPC25
WDR46
RGL2
PFDN6
RAD54B
CCNB2
CENPW
GNG14
SKA2
PRR11
AGFG2
CORO1A
LZTFL1
DNA2
VPS33A
AURKB
HCFC2
GLT8D2
ZNF688
ATG14
PLK4
EXOSC5
BCKDHA
ZFYVE1
MOCS3
DPM1
POC5
FBXW9
DDX49
COPE
RPP40
SKA1
TTC26
HSF1
BOP1
QSOX2
TADA2B
CCDC96
HMGB1
NUP214
P2RY11
RIPPLY2
CYB5R4
ACTR6
TAF13
MND1
RRS1
ADHFE1
CDK7
NDUFAF6
DUSP15
KIF2C
NUDT15
CCDC146
RHEBL1
VRK1
PPAN-P2RY11
PPAN
ANGPTL6
INTS7
DTL
ELOVL1
CDC20
TMEM186
PMM2
ESPL1
NOP16
HIGD2A
ATP6V1C1
DDX31
GTF3C4
HSDL1
DNAAF1
PRR5L
LOC101928764
COMMD9
CEP128
TUBAL3
ASPM
CDK1
ATXN7
SLC37A1
RSPH1
TWNK
MRPS23
MRPL43
LZTS2
NUP107
KLF1
GCDH
DNASE2
OAZ3
ATAD2
IPO11
DIMT1
RUVBL1
TRIP4
PCLAF
RAB22A
TTLL11
CCNE2
C3orf14
MRPL9
RFC3
GTSE1
TOMM40
C8orf33
ARMC2
NCLN
DDX11
RNFT1
MAD1L1
ZC3H18
RRP1
POLR1B
ZAR1L
BRCA2
NUDT1
MRM2
TSEN2
NTAQ1
PMS2
AIMP2
DYRK1B
POLR2K
NUDT2
KIF24
RBM28
URB2
TAF5L
CEP135
KMT2D
UGGT1
TMEM208
LRRC29
SMIM41
INKA2
RACGAP1
RTF2
TMEM150A
RNF181
NOM1
KIF15
KIAA1143
NDUFV1
ATR
MARCHF8
AEN
S1PR4
ZGLP1
FDX2
ATG101
GATB
TRMT6
MCM8
C6orf89
NCAPG
KLHDC4
EIF3C
UTP23
NAA25
GPN2
HSPA9
PPRC1
PHTF1
SECISBP2
CKS2
ODF2
TCF19
POU5F1
CCHCR1
PLK1
SUPV3L1
ZSCAN2
FAM53C
CDC25C
EIF3CL
DDX20
TONSL
PWP1
FBXL13
ARMC10
MFSD1
RBM48
PEX1
UBE3D
DOP1A
VAC14
LSM5
AVL9
SPAG1
COG7
SPTAN1
LTN1
DBNL
SSBP1
MED20
BYSL
HAGH
FAHD1
UBXN11
NHP2
FOXH1
DBNDD2
KDM5B
PNPT1
KNOP1
IQCK
STIL
LSG1
SRPRB
NRAS
BBS5
WDR62
THAP8
BUB1
WIPI1
SNRPE
GPATCH3
PCOTH
MIPEP
C1QTNF9B
ATP6V0D1
AGRP
USP39
C2orf68
HEATR1
DNAH7
LRRC24
PPP1R16A
DDX21
HEXA
EEF1E1
FBXW8
FBXO43
POU2F1
COMMD4
DNAJC25-GNG10
DNAJC25
PNO1
TOP1MT
AXDND1
UNC45B
NLE1
CLSPN
MRPL27
EME1
ZNF778
C12orf45
FAM200B
CORO7-PAM16
CORO7
CENPE
RAD9A
DPH2
B4GALT2
ATP6V0B
YIF1A
TMEM151A
TRIAP1
COX6A1
RTN4RL1
DPH1
ZNF696
RIN1
BRMS1
TRIM33
QTRT2
CCDC191
SLC25A26
TPX2
TBC1D30
YPEL2
TRAIP
TPH2
RECQL4
LRRC14
TFB2M
CNST
SFSWAP
TSEN54
LLGL2
PPP1CA
METTL2A
OS9
CENPB
CDC25B
TEKT2
ADPRS
CDC14B
TACO1
UBN2
MFSD3
PUS1
NPM1
USP30
TOP1
RNASEH1
ASF1B
B4GAT1
CDCA8
C1orf109
VTA1
NMBR
RMDN1
FARSB
FAM24A
KNL1
ZGRF1
LARP7
GTPBP4
ZNF358
PPP1R12B
THOC3
SETD4
CBR1
DUS2
DPEP2NB
DDX28
GTPBP10
ATP5F1E
GNS
TBRG4
CASKIN2
UBE2T
TRAPPC6A
BLOC1S3
GAR1
FAM214A
TDRD7
MCOLN1
SPTLC1
ECSIT
SDAD1
CHCHD1
GFM1
TMED5
CNN1
CCDC18
SLC25A19
CPEB4
CMC2
CENPN
DIAPH3
POLR2J
ZC3HC1
PUM3
RXYLT1
FAM227B
DTWD1
SMIM5
ZNF530
WDR61
CPNE3
SPCS1
GLT8D1
CENPS-CORT
CENPS
PRMT2
SHQ1
RPIA
ANAPC7
MDN1
METTL2B
UBFD1
EARS2
SNRPD1
TOMM22
WFDC3
DNTTIP1
NOC4L
DDX51
AP4E1
ZHX3
HAUS7
NOMO3
ZBTB9
ZNF23
SPATA2
PRELID3B
MMUT
CENPQ
TIMELESS
MIP
MYL12A
CFAP299
MPHOSPH10
MCEE
PUS7
SYNJ1
RTKN2
RGS14
LMAN2
NUP35
PRPF18
STX16
PARG
VPS11
MKI67
PARPBP
NUP37
NUB1
REXO4
ADAMTS13
DNAJA3
GGH
HM13
RINT1
DDX42
CCDC47
CENPM
STOML1
RAD51AP1
C12orf4
KIF23
HBP1
TFIP11
CENPH
PML
TMEM199
SEBOX
POLDIP2
MYBL1
PDSS1
MYL12B
TBC1D15
DEPDC1B
TRUB2
COQ4
FIS1
CCDC150
NOL10
RRP9
PARP3
ARHGAP11A-SCG5
ARHGAP11A
IREB2
DDX19A
RNASEH2A
PRDX2
ZSWIM8
C1orf54
DHRS11
MRPS35
MRPL3
PC
PSME3
BECN1
CCT5
ATPSCKMT
POLR3GL
LIX1L
ANKRD34A
CELSR3
KLHL32
PLEC
HEATR5B
GPATCH11
SLF2
PKD1L3
DHODH
SERINC3
PKIG
TMEM129
TACC3
SLBP
METTL3
POMZP3
THADA
GLE1
BICDL1
FAM207A
DLGAP3
SPC24
DUS4L-BCAP29
DUS4L
COG5
SLC39A6
KLHL24
MTMR14
RIOK3
TTLL5
ERG28
DBF4B
TMEM249
SLC52A2
FBXL6
GPAM
PTPN1
SH3BGR
LCA5L
SYS1
PRPF38A
ORC1
KCTD9
CDCA2
DEPDC1
MRPL4
GPR89A
PDXDC1
CENPF
TPRN
TMEM203
NDOR1
UTP15
ANKRA2
WDR3
GDAP2
TCTN2
NOMO2
EIF3H
PSMB7
PEPD
SPEF1
DPY19L4
TRMT61B
APH1A
SLC19A1
HMGB2
FAM185A
ANAPC5
ENDOV
ZWILCH
SNAPC5
RPL4
NOL7
KIF11
PPIL1
TBX2
NARS2
SAR1B
NAT10
POLR2J2
POLE3
C9orf43
ALAD
CYB561
SEL1L
TOM1L2
POLR3F
DZANK1
DRC3
DDX46
IARS1
SEC13
CRLF3
ATAD5
TAMM41
FKBP3
FANCM
SKIV2L
NOMO1
NELFE
LARP4
FAM186A
MRM1
TEDC1
IMP4
FKBP1A
CCDC115
NAGK
SLC35B1
PIP4P1
GSN
TIGD5
EEF1D
CNPY3
RAB5B
PYCR3
SNRPD2
QPCTL
OXNAD1
DPH3
NGDN
SEC22B
TOR1A
LSS
GPR61
FCF1
AREL1
OSGEP
APEX1
GFPT1
EXOC3L1
E2F4
AP5Z1
CALCOCO1
ATXN7L2
KIAA0895L
GNAI3
TEDC2
CRIP1
CFDP1
MNS1
GPD1
COX14
CHUK
HROB
DYNC1I2
CNOT4
TMEM120B
DYNLL1
PES1
EIF2S1
ATP6V1D
RNMT
FAM210A
C12orf43
SASS6
MARS2
NDUFAF4
C5orf51
XRN2
CLTC
RNF114
RPS29
PCNA
EIF1AD
CST6
BANF1
ZBTB49
LYAR
INCENP
CLCC1
CFAP298-TCP10L
CFAP298
DPP3
WDR43
PTRHD1
CENPO
TMEM67
RHNO1
PPM1E
NEU1
FOXM1
GFUS
PTPRH
CASP8AP2
RAB41
PDZD11
KIF4A
CENPA
RECQL
GOLT1B
LTO1
PMEL
CDK2
USP14
ZNF789
ATP5MF-PTCD1
ATP5MF
SPEF2
GPR89B
INTS1
OGDH
FAM180B
RBBP5
URM1
NOLC1
SNAP25
ZNF367
RPL6
PTPN11
METTL18
C1orf112
MCRS1
RPF2
INTS2
CDK5RAP3
TMEM231
CREB3L2
AARS2
ROPN1L
KLF10
MXD1
TMEM248
LRPPRC
NDUFS3
KBTBD4
ADAT1
TRMT44
OIP5
NUSAP1
ANKRD42
ASB8
AP3B2
SHOX2
LYRM4
FARS2
MAK16
AOPEP
TMEM18
PIF1
ANAPC10
ABCE1
MAF1
DNAAF4
CYC1
SMC4
IFT80
CDK5RAP1
CDC37
PALB2
HSP90AB1
DCTN5
IFT172
GCKR
FNDC4
ZNF408
ATXN1L
ARHGAP1
TMEM230
HSPH1
ADCK1
PPIL2
DDX5
TDRKH
ZNF79
CDIPT
ABCC6
ZSWIM9
TUBB3
MC1R
LIG1
RMI2
ZFAND2A
HSPA5
H3C15
H3C14
H2AC19
H2AC18
XPO5
POLH
H4C15
H4C14
ATP5MG
RABIF
GNL2
INIP
CDS2
SPPL2A
VPS45
TPRA1
MCM2
CGGBP1
TAF5
WDR37
TTLL4
CLDN15
SUPT7L