ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4313220 | RH-4
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX2023732: iPS derived cardiac cells

◢ SRX2023764: iPS derived cardiac cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX4732741: Pre-B cells

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◣ SRX4313220: RH-4

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

NPAS4
VPS50
HEPACAM2
SUMF1
RBM48
PEX1
ZNF335
SUPT7L
SLC4A1AP
NEURL2
CTSA
MTBP
MRPL13
KCNB1
XKR7
NAGPA
NOL8
CENPP
STX16
HEXA
ITGB3BP
EFCAB7
NUP107
CCNG2
MOCS3
DPM1
ZNF668
COX16
MSS51
WBP1L
CRBN
POLR2J3
TRMO
IDH3B
FANCD2
NSA2
GFM2
GTF3C5
COPS7B
KDM3A
LAMP1
TBC1D19
PEX3
ADAT2
SMG8
NGDN
HAGH
FAHD1
COPS4
SPOP
TMEM199
POLDIP2
POLR3F
DZANK1
INTS12
GSTCD
TOP3A
SMCR8
COMMD2
RPS7
NUDCD3
MTMR14
SPNS1
RTTN
C1QTNF1
PLEKHD1
ALKBH3
SSBP1
RBBP5
WDR36
AFAP1
DCAF10
EIF3F
SMN2
SMN1
HSPB7
TFIP11
NDUFAF5
ESF1
MEF2C
MTRNR2L2
ZCCHC4
LOC101928764
GAMT
ARID5B
AURKAIP1
ZCCHC7
PUM3
BLCAP
MNAT1
SF3A3
RBL1
PIH1D2
NKAPD1
TNPO3
GATB
UBE3B
ZNF830
CCT6B
RPA3
RPTOR
SBK2
NBPF1
TACO1
GPATCH3
TOMM22
MTRNR2L8
SULF1
GTF3C3
SYTL3
NOXO1
MARCHF4
WDR11
SFSWAP
COMMD4
CSTF1
AURKA
IQSEC3
NUF2
ZDHHC6
VTI1A
HDAC2
RFC3
FXN
TTC26
SELENOH
UBFD1
EARS2
SNRPB2
WASHC5
NSMCE2
MED23
PRRT3
ALLC
SLC39A3
NME1-NME2
NME1
VIRMA
TMEM242
AAR2
RBM28
BLOC1S1
REXO4
WASHC2A
HMGB1
USPL1
SUGCT
MPLKIP
TSFM
DRG2
SEC22B
CWC25
ACVR1
CHMP1B
ANAPC5
TNNT2
NOTCH2NLC
NUDT5
CDC123
COMMD9
NOTCH2NLA
KRTAP4-1
MRPS18C
HELQ
MRTO4
EMC1
TFPT
PRPF31
KCTD5
RBM19
MYLK4
FAM133B
UTP3
YJU2
SCP2
ABCB8
LSM5
ING4
NXT2
AHCY
FCF1
AREL1
TPRKB
STRA6
TNNT1
NCAM1
WASHC2C
STAT3
TIMM10
DGLUCY
C16orf91
UQCC1
SAP30BP
RECQL5
ZNF391
NMNAT1
LZIC
ZGRF1
LARP7
ISY1-RAB43
ISY1
VPS41
PVALEF
AATK
WDR24
SVOP
PIGBOS1
PIGB
LIMCH1
TIMM9
KIAA0586
MRPL1
TNC
STX18
ZCCHC14
PRKAR1A
ALG10B
SGSM1
ZC3HC1
MTF2
VPS33A
ATG14
MRPL44
DNTTIP2
TFB1M
NR6A1
IFTAP
FAM186A
MYBPC2
MAP3K12
CLDN15
TDRKH
PBK
TMEM222
CGGBP1
C3orf38
ARNT
SEC13
CWF19L1
TTC31
SNRPE
CCDC142
ZNF17
PUS10
PEX13
PSD
TRIP4
KLHL20
DPP8
HRCT1
LDLRAP1
ANKRD13C
PAXBP1
U2SURP
POMP
HTR5A
PRKAR1B
C11orf52
GET3
NUP54
SLC33A1
PELATON
VPS37D
ZMPSTE24
C1orf105
TVP23B
ASB18
OPA1
FAM149B1
ECD
GSX1
ST7L
CAPZA1
ZBTB40
ZNF383
SLC25A53
ZNF2
MYLK2
FAM207A
DNAJC2
TBC1D15
BET1
PSMB7
PEMT
C20orf141
BCAS3
OXNAD1
DPH3
ZNF461
FAM98B
TOX4
RAB2B
EIF3C
EIF3CL
NKAP
NRDE2
FRA10AC1
ABT1
TUT1
PIGL
VPS25
C1D
FAM228B
SF3B6
GFM1
TCF12
RPS26
MRPL48
MAPKAPK5
GAR1
LDAH
MAMSTR
IPO4
TRIM55
DSTYK
CALM2
ZGPAT
ARFRP1
GOLGA3
SLC25A51
COPS8
FZD1
MAGOHB
CWF19L2
SMYD1
SH2D7
GOSR1
SETDB1
ZNF32
PAFAH2
SYF2
CCDC97
CCNI
USP30
BNIP1
TATDN3
NSL1
SCNM1
LYSMD1
TIMM23
TXLNB
UROD
PSMB2
HECTD3
OSCAR
NDUFA3
CCDC146
NDUFB3
FAM126B
CCAR2
EIF1AD
BANF1
SLC35B1
PSMC2
ZNF408
ARHGAP1
FASTKD2
DLAT
PCOTH
MIPEP
UCHL5
RO60
MARS1
ARHGAP9
DMAP1
CEP162
KANSL1
ZNF350
COMMD1
CCT4
HPCA
TAMM41
RNASEH1
ATP6V1H
TBL3
TYW3
CRYZ
CLN3
CAV3
DDX18
TOR1A
BRF2
C2orf49
POLR2J
USP14
POLR2K
TRIM23
TRAPPC13
SHLD3
ADGRF5
ZBTB45
MTMR9
GFRA1
PSME3
INO80C
ARMC1
FAM200B
PARG
FLAD1
KRT80
PLEKHM3
H4C15
H4C14
MTERF1
TSPAN33
UBXN1
C4orf48
CSTF2T
GALK2
COPS2
ERGIC2
PSMD9
HPD
THAP10
LRRC49
MITD1
NOC3L
TMEM208
LRRC29
AP5Z1
TYW1B
TRMT1
CDK5RAP1
VTA1
NMBR
ALG1
SNIP1
ZNF302
WDPCP
MDH1
FAM240C
KRR1
SDHD
AP3S2
PPIP5K2
GIN1
MED4
DHX8
SCML1
MRPL12
MDM2
PCSK5
PCNP
COQ5
UBB
RRP15
RAD51AP1
C12orf4
MRPL21
IGHMBP2
MRPS15
SH2B1
TOM1
TPGS1
RPL11
EDC3
LLPH
UBQLN1
AOPEP
RALGAPA1
ATR
TRUB2
COQ4
SDE2
NFE2L2
MRPL27
EME1
CDK11A
KAT5
ELAPOR2
ZNF185
YARS1
S100PBP
TEFM
CLASP1
SMIM26
UTP25
MRM3
GLOD4
METTL2B
FAM135A
TTC4
TM9SF4
TRAF6
RAG1
KHDC4
RNF6
CHRNG
RAB37
NOTCH2
BORCS7
VPS13B
ACOT9
LSG1
ELP3
CELF3
SNAP25
TBRG4
SF3B5
METTL2A
PMPCB
ERCC1
B3GALT5
MUSK
RNF186
MARCHF8
MRPL16
PRPF38A
ORC1
SUPT6H
SDF2
BMS1
DUS2
DDX28
LRIF1
RRS1
GTF2H2C
GTF2H2C_2
MRPS11
MRPL46
TMEM177
TLN2
UBOX5
FASTKD5
SYTL2
RSRC1
SLC39A9
ERH
TCF3
NDUFAF1
SNRPD1
MRPL10
LRRC46
ZNF785
MTLN
N4BP2L2
USP12
FAF1
CCDC102B
STK36
RNF25
TBL1X
WDR83OS
WDR83
UTP20
LTV1
HUS1
RPL27
ATF6
TOM1L2
DRC3
LTBP1
DBR1
MED18
NEXN
SOD2
WTAP
VPS11
PPIL3
NIF3L1
RTF2
MRPS31
PES1
TIMM21
FBXO15
THOC1
DTNA
DHX40
GTF2H4
PSMF1
TRIM62
ANKRD1
INO80B
C5orf51
CFAP298-TCP10L
CFAP298
ZNF398
NVL
ZNF425
MAP3K7
TBC1D23
SLC30A6
SULF2
ZNF26
CFAP69
ZMAT2
TSC22D4
TAF2
DPH5
SEMA3D
TRMT61B
SECISBP2L
OSBPL9
SNRPD3
GUCD1
FAM110A
SCFD2
RBM42
SOGA1
MED6
MRPL35
SDAD1
NRDC
KXD1
TRIM44
ADPGK
EPHA3
CITED2
SLC31A1
FKBP15
ZNF507
CCL26
CHGB
KDM1A
INKA2
DDX20
CDC6
OAZ3
MRPL9
MCM7
AP4M1
CMSS1
ZMAT1
SLC25A34
TGFB1I1
RCAN1
CDIP1
SBDS
NDUFA9
AKAP3
PPIL4
AAAS
RPL5
TSR1
SGSM2
ZRANB2
MC2R
EIF2D
ADPRS
SCRN3
CIR1
NUP42
NUP155
ZNF596
MTOR
SLC25A20
RPL26L1
ASTN2
TRIM32
PSMB6
DGKB
IPO11
MAGOH
NDC80
METTL4
TBCK
AIMP1
LAS1L
ZNF561
ZDHHC12
ARFGEF2
PDRG1
EXOC1
TOP3B
DDX41
ING3
GINS1
ALDH6A1
LIN52
MRPS16
DNAJB4
CALD1
ATP5F1E
TRIAP1
ALG10
NOL7
S100A8
RPL34
CTR9
KCNMA1
PTPRCAP
NUP214
MTIF2
TMEM41A
HNRNPD
FBXO8
CEP44
PACRGL
MEGF9
GNAL
PDE12
ZNF384
ABHD2
ZNF576
IRGQ
PEF1
DBT
BRPF1
REPIN1
RMDN2
SNRPB
UTP14A
CRNKL1
CFAP61
SPATA2
GRN
ZNF473
VRK3
C18orf21
THUMPD1
ABCF2
GID8
DIDO1
FHL2
NOP16
HIGD2A
MPHOSPH10
MCEE
DDX1
LAMTOR5
RPS27L
ENDOV
INTS4
NELFCD
SASS6
CDKAL1
NOTCH2NLB
PDE4DIP
ARHGEF1
GORASP2
CYCS
MED28
CPLX2
RPS19
C16orf71
ANKS3
PCNA
EIF2S1
ATP6V1D
CBWD5
TBPL1
NDUFA5
SPATA6L
PLPP6
DAB2
KRIT1
ANKIB1
NUFIP1
GPALPP1
ATF7IP
SLIRP
ALKBH1
C15orf40
PACSIN2
GLRA1
NRAS
TSG101
PRPF6
CREB5
MED1
NDUFS7
PIKFYVE
C12orf73
RAD18
IRAK1BP1
PTCD3
POLR1A
HPS5
GTF2H1
CPPED1
FAM156A
MOB4
HSD17B11
FAM156B
ARHGEF12
ZNHIT6
TNFRSF19
LAMTOR3
GUF1
TNPO1
UBXN2B
HMGCS1
ZNF45
MB
GBA
COASY
TBP
PSMB1
UBE4A
PNKD
MUL1
AAMP
GGT5
TPH2
EIF3H
MRPL3
OS9
LMAN2
PARL
ATP6V1C1
DYNC2I1
SPHK2
RPL18
HIF1AN
SELENOT
PHAX
MPRIP
CBFA2T3
PROSER1
NHLRC3
PPT1
SH2D5
MRFAP1
LITAF
SMG7
CLASP2
ABLIM1
SLC36A1
POLR2M
EIF4A2
CHD2
TNNI1
CDC25B
AARS2
PEX12
ARMC8
STX8
CFAP52
EYA1
SZT2
MED8
ACYP2
DIS3L2
C10orf88
PRPF18
TMEM186
PMM2
ACOX3
RABGEF1
HAX1
TRMT44
PSMA1
ZKSCAN2
TSSC4
TTC30B
SHPRH
ST7
FGFRL1
AGBL3
COA1
TRIM45
AARSD1
AP1S1
OSGEP
APEX1
MFAP4
CBWD3
FNTB
CBWD6
MRPL53
MFF
CDCA7
THUMPD3
CHMP4B
NPEPL1
SLX1B
SLX1A
BOLA2B
BOLA2
BRIX1
ZNF142
BCS1L
EIPR1
SORBS1
AMPD3
DNAJC16
SNRNP35
LOC100996750
KRTAP4-7
PPM1L
HDAC8
CYB5R4
FAM227B
DTWD1
LRRC59
GCDH
DZIP3
CIP2A
POC5
NCAPH2
LMF2
SPRYD4
RARS1
B9D1
ZNF572
EXOSC8
SYNPO2L
PAK1IP1
C6orf52
ISOC2
NAV2
PSMG2
CEP76
MGRN1
RAC1
TIMM17A
NDUFS3
KBTBD4
TRMT6
MCM8
IARS1
C3orf14
CCDC174
ATAD2
ZNF606
S100A2
CACUL1
CUL2
EIF3K
RBM22
MYL10
SSNA1
ANAPC2
DYSF
PRADC1
PCSK2
HSPH1
CCT7
ANKRD17
WDR25
WARS1
ZC3H10
KANK2
ARMCX5-GPRASP2
ARMCX5
DOK6
PSMD6
HES3
RECQL
GOLT1B
DBF4B
TCTE3
ERMARD
TTI2
GBE1
HMGCL
DR1
UQCC3
LBHD1
PPP5D1
CALM3
COQ7
TOMM7
RNF187
C17orf75
NCBP2AS2
NCBP2
REXO5
ERI2
CNN3
OR51T1
USP35
KCTD21
SKA3
MRPL57
PDE4D
ARL8B
EOMES
UBR4
CDK4
DOCK6
MTFR2
C8orf33
PPM1B
INTS7
DTL
NR1H3
ACP2
GPAM
ZNF212
ZFYVE27
FTCDNL1
HOMER1
PEX19
SDC4
RPL3
MAP3K7CL
CDK7
CDK5RAP3
PFKM
OSBPL7
SENP1
TTI1
RPRD1B
MTMR4
POLR3A
DENND2B
MMP26
TFB2M
CNST