ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4313202 | RH-4
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX2023732: iPS derived cardiac cells

◢ SRX2023764: iPS derived cardiac cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX4732741: Pre-B cells

◣ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

NPAS4
STX16
HTR5A
NUP107
CDK5RAP1
COPS7B
XKR7
NR6A1
MTRNR2L2
TMEM242
ZNF335
TPH2
SLC39A3
NEURL2
CTSA
COX16
CRBN
SUMF1
SSBP1
ITGB3BP
EFCAB7
FANCD2
SVOP
MTBP
MRPL13
VPS50
HEPACAM2
KCNB1
ZNF668
NUF2
PVALEF
AATK
SF3A3
RBM48
PEX1
INTS12
GSTCD
AHCY
PEX3
ADAT2
HPCA
WDR11
HMGB1
USPL1
C1QTNF1
PIH1D2
NKAPD1
TBC1D19
STX18
GBA
CCNG2
TNC
HAGH
FAHD1
HEXA
COMMD2
SUPT7L
SLC4A1AP
EIF3F
TTC26
IQSEC3
ZCCHC4
SMG8
NDUFAF5
ESF1
POLR3F
DZANK1
PPIP5K2
GIN1
ZC3HC1
SPNS1
MSS51
SLC44A1
COMMD9
RPS7
MARCHF4
PAFAH2
TRMO
WDR36
MRPL44
VTA1
NMBR
MTRNR2L8
NDUFB3
FAM126B
WASHC2A
MITD1
MRPS18C
HELQ
PLEKHM3
GAMT
EIF1AD
BANF1
MTF2
NSA2
GFM2
SEC13
FCF1
AREL1
CYB5R4
UTP20
WBP1L
RBM28
NAGPA
ATG14
DMAP1
KRR1
TDRKH
SEC22B
SMG7
KYAT1
FXN
FAM98B
GSX1
ZCCHC7
YARS1
S100PBP
FAF1
LSG1
ZDHHC12
NMNAT1
LZIC
LAMP1
TMEM222
COPS4
ZBTB45
NDUFS3
KBTBD4
SLC24A1
INTS14
SNAP25
SMARCD2
RAB37
POLR2J3
GATB
TACO1
NME1-NME2
NME1
CHGB
WASHC5
NSMCE2
RTTN
FAM133B
CCAR2
BRF2
WDR24
VPS11
SNRPB2
ALKBH3
MYBPC2
PLAAT5
AP3S2
CPLX2
RBBP5
GTF3C3
FREM1
GRN
SULF1
WASHC2C
AAR2
IDH3B
HRCT1
KXD1
MOCS3
DPM1
LSM5
PAXBP1
SUGCT
MPLKIP
C12orf73
TSFM
NUP54
RPTOR
B3GALT5
TRMT6
MCM8
STMN3
MPRIP
TRMT5
SLC38A6
NDUFS7
PIGL
HDAC2
ACVR1
PRRT3
UQCC1
INO80B
ATP5F1E
KLHL20
PFDN4
SPOP
SYF2
CGGBP1
C3orf38
AURKAIP1
RPL27
NUDCD3
NOL8
CENPP
KDM3A
SCFD2
USP30
NR1H2
PUS10
PEX13
VPS37D
PLEKHD1
RRP15
C20orf141
DRG2
UBFD1
EARS2
COMMD4
TATDN3
NSL1
OSCAR
NDUFA3
EIF3H
RBM42
PCOTH
MIPEP
PALB2
DCTN5
TRUB2
COQ4
RNF6
PUM3
ZNF461
TRIP4
TCF4
TCTN3
PSMF1
AP5Z1
SELENOH
TOP3A
SMCR8
GPATCH3
VPS29
RAD9B
ALG10
EXOSC3
REXO4
PPP6R1
TUT1
RBL1
UBE3B
VPS25
PTPN1
STXBP5
RTF2
TFB1M
PEMT
CWF19L1
BLOC1S1
SLC33A1
RCAN1
VWC2L
TEFM
FRA10AC1
CHST12
MPHOSPH10
MCEE
RHOJ
KRTAP4-1
SCP2
SLC36A1
CDC7
AQR
MRPL1
BLCAP
LLPH
IPO4
METTL1
EEF1AKMT3
FAM228B
SF3B6
KAT2B
UTP11
ANAPC5
SCAND1
SPATA2
TMEM41A
ZNF830
CCT6B
YTHDF2
TFPT
PRPF31
KCTD5
PPT1
SLC35A3
MTIF2
DDX1
DHDDS
CCDC146
DPY19L4
MRPL3
MUSTN1
POLR3B
FAM186A
NOXO1
LRRC59
DNAJC25-GNG10
DNAJC25
PIKFYVE
PSD
NCOA6
TMEM199
POLDIP2
WFDC3
DNTTIP1
TNPO3
PBK
CBWD5
SLC25A51
SMIM12
MRPL39
MNAT1
TMEM101
ARID5B
TRMT1
ERAL1
MRPS31
MED6
PITHD1
TTI1
RPRD1B
TOMM22
BNIP1
HHIPL2
ZCWPW1
MEPCE
OPA1
FHL2
NPEPL1
ADCYAP1
JRK
SFSWAP
YIPF2
TIMM29
DNAJC24
DCDC1
PTCD3
POLR1A
MAPKAPK5
SLC35A4
APBB3
VPS33A
SLC25A53
CSTF1
AURKA
STAT3
EYA1
CCDC59
MRPS15
NFE2L2
CDIP1
HSPB7
TOP3B
METTL2B
GALK2
COPS2
G6PC3
NCAM1
UTP25
BCAS3
THAP10
LRRC49
THOC1
DDX18
SNRPD1
CLPTM1
ZNF212
CDK7
OSBPL9
GSN
RAB14
RRS1
TOX4
RAB2B
MRPL16
SCNM1
LYSMD1
ST7
ATR
SDAD1
ALG10B
AFAP1
TACR3
CCDC107
HUS1
ZFYVE26
PPWD1
CENPK
DOK7
C2orf49
RBM19
MFSD1
FAM117B
C8orf37
CRELD1
SNRPB
GTF3C5
GRWD1
CLUAP1
MTERF1
OXNAD1
DPH3
PCM1
NKAP
RTEL1
DOP1A
EIF2D
KDM1A
DCAF10
OAZ3
MRPL9
TTC4
GET3
LOC101928764
TOR1AIP1
SEMA3D
DOCK7
NEXN
NBPF1
DSTYK
PTK6
TSPAN33
CHCHD2
ZSCAN25
ARHGAP24
UBE4A
MED23
PSMB7
EPHA3
OBSL1
INHA
LAS1L
GFRA1
GPAM
KANSL3
METTL6
EAF1
RPS12
SBK2
NCOR2
CAV3
CWC25
POMZP3
ZNF165
ISOC2
MTMR9
C10orf88
CBWD3
MTFR2
ZNF408
ARHGAP1
PTPRD
PDZRN3
MC2R
RTN4
IPO11
ARMC1
SSX2IP
PSMD3
EFTUD2
CCDC103
NDUFS4
TBC1D23
NDUFAF1
PCNP
RANBP6
WDR12
CARF
SCFD1
SDC4
GTPBP10
NR1H3
ACP2
RBSN
WDPCP
MDH1
RASGRP3
NYAP2
UTP3
SEMA3A
MTOR
ZSCAN30
BORCS7
BRIX1
CCNI
MANBAL
TOR1A
PRPF38A
ORC1
FAM217B
PPP1R3D
NOTCH2NLB
KANSL1
TPGS2
RPA3
GPATCH4
UBOX5
FASTKD5
FAM240C
GDAP1
SNX1
PCYT1A
DARS1
SULF2
AMPD3
MSL2
RNF181
RFC1
TRMU
SLC1A5
NOP16
HIGD2A
SYTL2
DBT
SAP30BP
RECQL5
VPS45
ARFGEF2
ZMAT2
HPS5
GTF2H1
MDM2
UNC80
RARS1
C5orf51
MTMR14
NSUN4
RAB18
NGDN
SCRN3
CIR1
TCTE3
ERMARD
PSMB2
TTC32
GLRA1
GOSR1
CLASP2
ELAC2
LTBP1
MMADHC
CRNKL1
CFAP61
NOXA1
MTMR6
TYW3
CRYZ
TDRD7
HIBADH
PRPF18
DNTTIP2
HNRNPD
GOLGA3
TYW1B
PTPRA
KCNMA1
NLE1
GTF2H2C
GTF2H2C_2
MAP3K7
SECISBP2L
SERINC3
ZMYM2
AASDH
MAN2C1
FLRT3
PSMD6
DYNC2LI1
GPSM1
USP15
PCBP2
PRPF6
ESCO2
KCTD9
CDCA2
PIGK
ZNF785
VPS13B
FAM185A
FBXO8
CEP44
ATP6V1H
POLR2K
RLF
DLAT
ZNF775
TFIP11
EMC4
TNFRSF19
LRIF1
ZNFX1
DNAJC2
NADK2
TTC5
MAGOHB
TMEM230
COX10
CLN3
DST
TANK
GARS1
RPS20
MRPS34
EME2
U2SURP
TMBIM4
ELAPOR2
BCAR1
FILIP1
TRIAP1
PNPT1
DCP1A
TIGD1
EIF4E2
CHMP1B
RFXANK
BORCS8
TTC21B
SPTLC1
TBRG4
MRPS33
COPS8
FZD1
ARMC8
IFT46
ZAR1L
BRCA2
CDKAL1
ZFYVE27
CDC23
GHITM
CORO7-PAM16
CORO7
RPL9
LIAS
SPART
DCTN1
PSMD9
HPD
FAM207A
C2orf42
SSBP2
ARHGEF12
RBPJ
OSGEPL1
PSMC1
TLN2
SMYD1
INMT
TAMM41
TBCK
AIMP1
CCDC28A
MCAT
MYL12B
NAGLU
CDC42EP3
ZNF473
VRK3
NOTCH2NLA
TM9SF4
MRPL12
CLK3
NET1
SNRNP25
POLR3K
NXPH1
ARHGAP35
MRPS23
HIPK1
DUS2
DDX28
CFLAR
ADRM1
TRIM62
STRA6
UCHL5
RO60
NAPA
SBDS
TYW1
SH2D5
PRRG2
NOSIP
CNN3
SYTL3
RRP12
TRAPPC6A
BLOC1S3
CDK11A
SNRPE
LARS2
ST3GAL5
ZNF142
BCS1L
HSPE1-MOB4
HSPE1
HSPD1
ENOSF1
TIMM9
KIAA0586
CHD1L
FAM83D
ERI1
LIMCH1
ERV3-1-ZNF117
ERV3-1
TMEFF2
MORF4L1
CHMP2B
GJA10
C3orf14
MTREX
DHX29
NEUROD4
KAT5
TBPL1
WDR3
GDAP2
NCOA1
MC4R
SOD2
WTAP
ZNF398
PPIL4
VPS72
PUS1
POLR3D
PGS1
ZNF425
CREB5
SMN2
SMN1
UEVLD
PSMA5
FAM200A
SASS6
ISY1-RAB43
ISY1
REPIN1
UBE2F
CEP70
EBAG9
CFAP299
POLR1F
SSTR5
BRPF1
KRTAP5-3
ZNF555
CCNC
PHF5A
MED4
ACO2
RPS27L
SIRT4
IFTAP
ZGPAT
ARFRP1
ZNF572
CDK4
CTDSP1
COMMD1
NCBP2AS2
NCBP2
ARNT
TSPAN10
NPLOC4
RNF186
CPPED1
PNO1
C16orf91
NOL10
RRAGC
AKR1B1
DR1
OR51T1
FBXL13
ARMC10
NOL11
EIF3E
TSR1
SGSM2
MIS12
DERL2
LRRC17
TOM1L2
DRC3
PERCC1
MED18
SLC43A1
SH2D7
IL21R
CELSR3
NOTCH2NLC
SMIM5
ARHGEF1
ATG101
ABLIM1
NAV2
ODF2L
METTL2A
POLI
OGT
MYLK4
CENPW
ZBTB40
CPNE4
UROD
MARCHF11
SYT14
HECTD3
NCBP3
SORBS1
COX7A2
CYSTM1
MRPL35
SLC25A34
SSNA1
ANAPC2
H4C15
H4C14
YJU2
NOTCH2
TMEM203
NDOR1
VGF
ARL14EP
MYO18A
LAMTOR3
UFM1
RPF1
KREMEN2
H6PD
OSBPL7
RPL6
RPS15A
RUVBL1
CCDC102B
NUDT9
BBS10
TRAPPC3
MAP7D1
C12orf66
TMEM181
BMS1
PIGU
C18orf21
ZNF383
POLE4
SEM1
CYP24A1
CLDN15
CNPPD1
RETREG2
CFAP410
STK36
RNF25
CENPE
EVI5
C11orf52
EIF3K
BTG2
ATP8A1
RPS14
ZNF391
CBLB
NDC80
METTL4
ERLEC1
ASB3
RPL29
PSMD1
RWDD1
WDR43
TBL3
BCAP29
OPRD1
EIF2B5
ZMPSTE24
ZNF721
PIGG
DYSF
VPS41
DHX8
HNRNPH2
DMPK
LMAN2
INO80C
GTF2H2
SF3B5
TVP23B
RMND1
ARMT1
RPL26L1
BEST3
ALK
ADAMTS17
YBEY
MCM3AP
RAD18
NSG2
CCT2
SOGA1
CAND1
AARSD1
EXD2
DAB1
GOSR2
MYH7B
GSS
OMA1
TSEN54
CASKIN2
MTR
VAC14
CMSS1
ZNF780A
EML2
WRN
STXBP4
COX11
SEC23B
PURG
EXO5
ZNF598
EBNA1BP2
CFAP57
TAF13
TMEM208
LRRC29
ING4
PEX12
GGA1
CDK2AP1
C8orf33
ZSCAN22
TRPM3
API5
ATG7
RAD50
ATRN
C9orf85
ABHD17B
BOD1L1
CDCA7
MGRN1
TUBE1
FAM229B
LOC100996750
KRTAP4-7
NHLH2
NUP214
TSN
SH2B1
KLHL12
GPN1
CCDC121
TUFM
RPL5
ELOVL1
RPL11
FGL2
USP35
KCTD21
NDUFC2-KCTD14
NDUFC2
SLC25A26
EIF2S1
ATP6V1D
STAM2
HNRNPA1L2
METTL9
GADD45B
BAZ2B
PRR5
ATF7-NPFF
ATF7
C18orf25
PRR5-ARHGAP8
PSMA4
DOK6
FARSB
BRAP
ACAD10
GSPT1
ZNF777
MED28
KRTAP4-2
JMJD1C
TEX10
CBWD6
NKIRAS1
PIN4
RPL15
RPL21