ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1053919 | iPS cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◣ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX2023732: iPS derived cardiac cells

◢ SRX2023764: iPS derived cardiac cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX4732741: Pre-B cells

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

NPAS4
HTR5A
TDRD7
MTRNR2L2
XKR7
MTRNR2L8
GSN
RAB14
IQSEC3
CAMTA1
CPLX2
ZNF555
ZEB1
CYB5R4
KCTD18
GBA
POLR3H
RBM48
PEX1
RAB37
RGPD2
RGPD1
HPCA
TPH2
CRBN
SNAP25
EPHA10
RNF187
MARCHF4
BARHL1
SUMF1
KXD1
ASMTL
UTP20
STX16
NBPF1
COPS7B
NUF2
NME1-NME2
NME1
FANCD2
ASF1A
VPS50
HEPACAM2
WASHC2C
SLC39A3
SLC35A4
APBB3
CELSR3
SVOP
NAGPA
TMEM242
SCFD2
NEIL3
TIPARP
POLR2J3
ZNF77
ZNF335
WASHC2A
TTC26
LARP1
EIF2D
MAPK8IP2
DNAJC5
CALR
SPNS1
TRIP4
HEXA
CCDC106
RRP15
TTLL4
SSBP1
INTS12
GSTCD
SMG8
IDH3B
GLRA1
SPOP
VIM
MTFR2
UTP25
L1CAM
CHGB
VPS33A
FAM227B
DTWD1
EIF1AD
BANF1
AHCY
ZCCHC7
NEURL2
CTSA
ZCWPW1
MEPCE
NEUROD4
COMMD2
DHDDS
NUP214
KIF18B
ATL3
WASHC5
NSMCE2
IPO4
GATB
TXLNA
UBE3B
FBRS
TBC1D19
CRNKL1
CFAP61
RBM19
PGAM5
NOL8
CENPP
CCNA2
SCRT1
GTF3C3
NUP107
KIAA0895
BIRC5
PSMD9
HPD
ITGB3BP
EFCAB7
HMGB1
NEK2
P4HA1
SOD2
ESCO2
SFSWAP
DHX40
PEX3
ADAT2
TRMT1
ZC3HC1
WDR36
HDAC2
CDK5RAP1
RBBP5
MTRNR2L9
COMMD9
IQGAP3
GPR158
WDR74
EXO1
CFAP54
ATG14
POM121
CCNG2
FBXO5
TMEM248
UBE2O
AANAT
STX18
OSCAR
NDUFA3
TDRKH
NPPB
TSFM
RFC1
EIF3F
UTP11
PAXBP1
C8orf33
USP54
COX16
CCDC107
HAGH
FAHD1
SF3A3
UBFD1
PAFAH2
EARS2
MED23
PLEKHM3
MIS18A
TOP3B
SGO1
WTAP
KIF20A
BRD8
TACO1
D2HGDH
CENPF
DRG2
FXN
QTRT1
VTA1
NMBR
NCAPH
PGBD5
SEC24B
KCNB1
TOMM22
CSTF1
AURKA
HIBADH
RPS7
SAP30BP
RECQL5
MTF2
RRP12
LRRC59
NFE2L2
MRPL44
IFT46
GOLGA7
KDM2A
GET3
SUPT7L
SLC4A1AP
PWWP2A
GPATCH3
TIMM17A
CBLL1
ZNF830
CCT6B
NDUFS7
RABGAP1L
RTTN
CDT1
MTBP
MRPL13
RBM28
DDX18
BEND3
TICRR
EBAG9
TMEM199
POLDIP2
METTL1
EEF1AKMT3
TRMO
TSR3
GNPTG
KLHL18
KIF9
CERCAM
CKAP2L
SEC31A
USPL1
STAT3
TMCO3
DCUN1D2
WDR11
ANKRD31
NUP54
FANCI
RPS19
DPF1
ATR
NDUFS3
KBTBD4
CPPED1
THAP9
ADAMTS17
SPATA2
PBK
USP35
KCTD21
PDE1C
MTDH
RGL1
LAMP1
DNPEP
EIF3H
YARS1
POLR3F
DZANK1
RRM2
USP30
RAE1
TRAPPC6A
BLOC1S3
TROAP
TM7SF2
RTN4
SLC25A51
GTF3C5
ARPC5
UNG
SKA3
MRPL57
N6AMT1
CRKL
COMMD4
NSUN4
EDC3
ZAR1L
BRCA2
RRS1
ZCCHC4
GDAP1
NLE1
MTIF2
ANLN
LTV1
CCDC59
SNX1
BLOC1S1
ANAPC5
XKR9
LACTB2
XRCC2
ATP5F1E
S100PBP
KLHL20
DNAJC11
FAM207A
PKDCC
EBNA1BP2
CFAP57
TIGAR
CCDC86
NOP16
HIGD2A
SMIM12
SLC25A40
DBF4
RAD51AP1
C12orf4
EIF5B
RAD54L
VPS29
RAD9B
YIF1A
SRRM3
CCDC88A
SELENOH
FBXO4
ARHGDIA
PDE4C
SNRPB2
MARCHF8
TMEM41A
HUS1
FAM133B
MTRNR2L10
KDM1A
ZFPL1
CDCA5
DCAF10
PPM1B
TRUB2
COQ4
RFX1
SLX1B
SLX1A
BOLA2B
BOLA2
PUS10
PEX13
BCAS3
ANKHD1-EIF4EBP3
ANKHD1
ANK1
PIH1D2
NKAPD1
KIAA1586
ANTXR1
MRM3
MFSD1
GLOD4
VPS9D1
MRPL40
HIRA
SEC13
PFDN4
CKMT1B
TTC27
YTHDF2
NUDT15
MRPL39
C12orf66
KRR1
MRPS18C
HELQ
CDC6
NOL6
SYNJ1
SMARCD2
OAZ3
MRPL9
GTF2H3
EIF2B1
TXNDC9
TRMT6
MCM8
PSMD6
LSG1
OGDH
TMEM222
PUM3
RBM42
GRWD1
SASS6
SUGCT
MPLKIP
CCNB1
CYB5A
SSNA1
ANAPC2
CLK3
RAB18
BUB1B
SLC12A9
HES3
TRIAP1
KLHL32
FAM98B
TEFM
EXOSC5
BCKDHA
TTC31
BOD1
NDUFAF5
ESF1
BNIP1
MOCS3
DPM1
AAR2
DMAP1
POLR2J
GON4L
SST
ADPRS
STAG1
DLGAP5
CWC25
ERG
FRA10AC1
PSMD3
ENOSF1
CLVS1
NSA2
GFM2
INO80B
C10orf88
ANXA5
WDR4
SLC45A4
NUP35
AURKB
UFD1
CDC45
DCLRE1B
AP4B1
DNAJC25-GNG10
DNAJC25
ZSWIM8
VPS37D
CCDC146
SLC33A1
PIKFYVE
MRPL27
EME1
TFIP11
TSEN54
GTF2H4
CASKIN2
CDK7
SGO2
NTSR2
H6PD
SDAD1
NGDN
AP3S2
STMN3
ARHGAP45
DNAH7
ZNF668
ACVR1
MRPS35
INTS7
DTL
NOS3
TATDN3
NSL1
NDUFAF4
MRPL21
IGHMBP2
FRMD3
GLI4
PRRC2B
TTC9B
DPY19L4
NDUFC2-KCTD14
NDUFC2
CFAP299
SYT11
MRPL3
STEAP2
MIS18BP1
TMEM181
CACNG3
FAM117B
SMIM30
PSMB7
ZNF391
RAD51
TOP3A
SMCR8
NMNAT1
LZIC
GCDH
PARPBP
NUP37
CENPW
GATAD2A
TBRG4
BOLA2-SMG1P6
TSEN15
SHC1
KHK
CKS1B
SEC22B
PRRT3
THAP10
LRRC49
DZIP3
CIP2A
PIP5K1A
H4C15
H4C14
FAM98A
SLC44A1
MCM10
PRCP
DDIAS
C17orf75
ZDHHC24
ACTN3
SCG3
MCM7
AP4M1
CDC73
MMP24
RHEBL1
MFSD14A
GTF3C4
DDX31
CCDC77
ALKBH3
GTF2H2C
DIABLO
TCTN3
ZGRF1
LARP7
DNAJC2
PNPT1
CYRIB
ZNF558
U2SURP
CEP128
BBS1
PIEZO1
SYF2
EIF2B3
LSM5
MITD1
DIAPH1
AGK
CEP135
ALG10
TAMM41
NET1
TEAD1
IPO11
DDX49
COPE
DSCC1
TRIP13
MRPS15
DHX37
CDK1
BRD9
UBE2L3
CCDC92B
RAPGEF6
C2orf42
PPP6R1
C12orf73
TIMM9
KIAA0586
ACBD6
OPA1
DNAJC6
FBXO48
APLF
RING1
RNF166
CTU2
MTR
C16orf71
ANKS3
RPAP3
USP2
OS9
GTPBP10
CGGBP1
GTF2H2C_2
ALG10B
TFPT
SUPV3L1
PRPF31
ZFYVE26
LZTFL1
RGPD8
RGPD5
PPM1H
PPWD1
CENPK
MYBL1
UBC
KIFC1
FAF1
STAT1
SCRT2
C2CD5
MRPL48
CDC25A
FAM228B
PRPF18
MRPL1
CTCF
VPS11
RUVBL1
HSPA9
FNBP1
RPTOR
RBM45
NDUFAF1
ATXN2L
YBEY
SCP2
MAD2L1
FAM72C
SLC24A1
OIP5
NUSAP1
INTS14
BMS1
ACVR2A
AEBP2
SMYD5
RBM4B
UTP3
TAF3
MYBL2
C5orf51
ANKRD12
NOTCH2NLC
PSME3
DPH1
ALG1
SLC25A26
DNTTIP2
CDK11A
TMEM237
NDUFB3
FAM126B
EXOSC3
ZFYVE1
TMEM170B
SMC2
HNRNPH1
ZMPSTE24
CFAP20
PIGU
CEP55
SNRPE
PCNA
GRN
LMAN2
USP15
NOXA1
BLM
VRK1
SRSF11
KIF15
KIAA1143
KAT5
FBXL13
ARMC10
THAP7
RECQL
GOLT1B
NAGK
MRPS23
E2F6
TRIM44
ULK4
PYCR3
SEPTIN9
ZDHHC12
RABL2B
MPHOSPH10
MCEE
DDX21
CFAP298-TCP10L
CFAP298
CENPS-CORT
CENPS
PARL
MNAT1
DSTYK
CDC20
ZBTB45
PPIP5K2
GIN1
HNRNPD
RGPD6
TOMM5
NADK2
COASY
IBA57
PALM2AKAP2
KDM3A
ELMO1
CKMT1A
CALB1
ANP32E
PDE4A
NOC3L
PSMF1
TBP
NSUN5
TOX4
RAB2B
DHRS13
G6PC3
AURKAIP1
SLC35B1
KDM5A
VPS45
DNA2
KIF2C
SCRN3
RAD54L2
CIR1
PPIL3
NIF3L1
CCNL1
TOR1A
RTF2
REXO4
SMG7
MRPL16
FRMD8
PC
FAM111A
EMC4
TSN
TAF13
MAN2C1
SF3B6
QTRT2
CCDC191
HBP1
PHOSPHO2
CCDC173
GFM1
ZC3H15
ZNF546
TMEM101
TIMM10
ZNF473
VRK3
POLR3B
PCOTH
MIPEP
TRMT61A
POC1A
DST
AMZ2
PAK1IP1
C6orf52
TFB2M
SHCBP1
CNST
RUBCN
COPS4
FCF1
AREL1
ABT1
ERAL1
DCP1A
PSEN2
TRMT61B
C17orf49
KCNK12
CCAR2
ZNF398
AGBL3
ADPGK
BNIP3L
SCNM1
LYSMD1
CDC25C
SHQ1
NR1H3
ACP2
OXNAD1
DPH3
TTK
LIX1L
STIL
POMZP3
PLS1
RPA2
MCM3AP
INO80C
CCDC142
NUDT2
KIF24
NR6A1
RPL27
UCHL5
RO60
NEMP1
SH2B1
MOK
CCNC
ANKRD40
URB1
ZSCAN22
NSFL1C
ZNF331
VIRMA
YJU2
TIGD1
EIF4E2
WDR70
RAD18
SYT5
CCNB2
PSMB1
PPIH
IMP4
CCDC115
PNO1
ESYT2
FAM161A
ECSIT
CHD1L
NUP42
NAT10
IARS1
TMEM161B
CPNE9
SLC25A24
DDX1
CLUAP1
MND1
GTSE1
GJA10
GALK2
WDR24
GTF2H2
NSG2
PIGBOS1
PIGB
CYREN
SLC29A3
CNOT4
EIF2S1
ATP6V1D
ATP6V1C1
POC5
ZER1
MEF2C
DDX41
C3orf38
ACTR6
GPATCH4
SDHB
BSDC1
TMEM208
LRRC29
ARFGEF2
PDXDC1
CDKAL1
WBP1L
RNASEH1
XAB2
HEATR1
TUT1
FBXW8
POLQ
WDR62
THAP8
KCTD9
CDCA2
RFC3
AEN
SF3B5
NOTCH2NLA
RIMBP3C
RIMBP3B
MMAA
MICAL3
MAP3K7
KDM5B
CHRNB2
DEPDC1
VAC14
FSD1L
PMVK
PLK1
IQGAP2
PPIA
BRIX1
MRPS33
SSBP2
SMN2
SMN1
CARS2
TPBGL
FOXJ3
CWF19L1
TANK
RBSN
ASAH1
PIGL
RPIA
TFB1M
RNMT
FAM210A
ANKRD28
TVP23B
PACRGL
ZBTB40
DPP8
YIPF2
TIMM29
EEFSEC
C18orf21
STAM2
WDR46
PFDN6
TMEM186
SMIM5
SARS1
PMM2
DCAF4
ATG5
KTI12
FKBP7
XPC
LSM3
DNMT3A
SPC25
RNF145
KCTD5
JADE1
CFAP69
JMJD1C
METTL2B
TENT2
CHRM4
DMAC2
GPAM
ASNS
KANSL3
ASXL1
RHNO1
FOXM1
ARMC1
ZNF383
RBL1
LOC101928764
RPS29
TOMM40
NOL11
GRPEL2
POLD3
LRP2BP
ANKRD37
MANEAL
RAD9A
CPSF1
C8orf37
TMED1
KPNB1
KCNH6
ZNF165
FYTTD1
FEM1A
CRH
DYNC2I1
ZCCHC14
TTF2
TBC1D15
NOL7
DNAJC24
DCDC1
UGGT1
SNX16
PFAS
GOSR1