ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX100390 | hESC H1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◣ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX2023732: iPS derived cardiac cells

◢ SRX2023764: iPS derived cardiac cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX4732741: Pre-B cells

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

ASF1A
NPAS4
LARP1
MARCHF4
SNX1
TDRD7
KDM2A
SDHB
SLC35A4
APBB3
MAP2
GSN
RAB14
ZEB1
RABGAP1L
XKR7
DNAJC5
POM121
VIM
GPR158
C2orf42
GPAT4
DDX18
DHDDS
RAB18
STEAP2
NEUROD4
UBFD1
EARS2
CENPF
SELENOM
PPM1B
STAG1
TPH2
RAB6A
AHCYL2
CFAP20
PIKFYVE
MAPK8IP2
DNPEP
ULK2
ZNF546
TMEM161B
CAMK4
KXD1
CYB5R4
TM7SF2
EPHA10
IFT46
RGL1
ARPC5
ADAMTS17
TMEM170B
KCNH6
CPLX2
ARHGEF17
MPP5
PABPC4
CCDC107
CELSR3
PARD6B
UBP1
HSPA9
C22orf34
KIAA0895
MTFR1
TXLNA
ZAR1L
BRCA2
YTHDF2
HTR5A
LOC100289561
EEPD1
CAMTA1
ZNF555
TIPARP
ZNF677
IQSEC3
ANXA5
EEF1A1
TMCO3
DCUN1D2
KDM1A
NUP58
PKDCC
NEIL3
FKBP7
PGAM5
PPDPF
ANTXR1
SCAF1
MEI4
ELL
PDE1C
KHK
TNC
DOT1L
SLC6A6
ANKAR
WDR74
MZT1
BORA
SOD2
WTAP
C2CD5
CABP1
ARHGEF10
IFFO1
CARTPT
SVOP
ARPC2
MRPL48
SYT17
TTLL4
PHF1
HNRNPH1
CATSPERE
GBA
FSD1L
ANKRD31
HOOK1
FAM227B
DTWD1
FDPS
RBM4B
KCTD18
HPCA
POLDIP3
ZSWIM6
NPPB
PXK
EIF5B
TXNDC9
CPNE9
RSU1
RGS9
NSUN6
PSMD6
FZR1
C17orf49
MTRNR2L2
CDC73
REEP5
COPS7B
WASHC2A
WDR36
KCNB1
FRMD3
ENTPD8
SPG21
EHBP1
SMIM12
SMIM30
SCN3B
MTDH
CKMT1B
TMEM272
WTIP
WASHC2C
CALR
PRKRA
PJVK
NF1
RPAP3
ZNF77
FGF12
AKIRIN1
ASB6
HS3ST2
OGDH
SMG7
SMIM14
XPO1
DDIT3
CPVL
LSM14B
LRRC71
RRP8
ILK
USP54
MAML3
PIP4K2B
MACROD2
PSMD3
ARMH3
CLN8
ELMO1
EPHB1
ERG
CHST10
ANKRD12
TMEM17
RAB37
SPIN3
PAQR3
NDEL1
LNPEP
WWC1
CBLL1
SGCZ
TAF1D
C11orf54
MTRNR2L8
P4HA1
ARID2
SCML1
USP53
NDUFS7
AGK
OVOL2
CTXN2
FBRS
CCNL1
SLC39A3
KHDRBS1
RBPJL
SAR1A
PSMC4
ANAPC5
HUS1
CAND1
WWC2
PFKFB4
DIAPH1
USP12
MARCHF7
NTSR2
ACVR1
ZNF594
STARD10
FRMD8
NCAPD2
MRPL51
HMGB1
USPL1
INTS7
DTL
CXXC4
SEC24B
GRIA2
TTI2
IL20
MRS2
CCDC106
PFDN4
SCRN3
CIR1
SQLE
CBFA2T2
CRYZL2P-SEC16B
MEX3B
TBC1D19
SNAP25
GJA10
STT3A
FAM183A
MRPS2
C9orf116
GRM2
PUS7L
IRAK4
NFAM1
ENOSF1
CPEB4
ASMTL
PIGF
CRIPT
PRICKLE1
PDXK
GOLGA7
ZNF785
TMED7-TICAM2
TMED7
TIMM22
ABCB10
CDH2
PDE4C
FOXJ3
LRP12
CHST8
CD274
AXL
CPPED1
SRRM3
SERP1
EIF2A
NSUN4
SRSF11
TRPM3
THAP10
LRRC49
NAPA
ZNF554
NME1-NME2
NME1
TRAPPC6A
BLOC1S3
YPEL2
ACTN1
KIAA1586
CCDC77
KDM5A
ZC3H15
XKR4
FAM50B
GLI4
KDM5B
C3orf33
SLC35F4
STMN3
CDC7
SRXN1
RTN4
MAF
SIPA1L2
CSK
HIP1
CD320
UNC5D
GCNT2
VANGL2
FAM161B
COQ6
AMOTL1
N6AMT1
PLK1
SMARCA4
BNIP3L
KCNH4
SRF
POLR3H
COA1
LIN28B
METTL11B
NDUFC2-KCTD14
NDUFC2
FAM149B1
ECD
TRIM45
RPL26
CERCAM
DGKE
C17orf67
RPS19
ZSWIM8
ZNRF2
ANKRD50
RFX4
NLE1
TCF4
ZNF142
BCS1L
CUL5
CBX2
CYB5A
CNN3
SCRT1
EBNA1BP2
CFAP57
GLRA1
GDAP1
PSEN2
OTUD1
TMED9
SMG5
TTC23L
BTF3
FAM184A
ZCWPW1
MEPCE
GRM1
MIGA1
DCAF1
LIX1L
L3MBTL4
CDT1
AMZ2
GOLGA5
DRG2
DNAH2
GFPT1
RAP2A
MANEAL
ACADM
PEAK1
HMG20A
FBLL1
FAM98A
SMIM5
RASGRP1
RBPJ
TRIM16
ZC3H4
CHST6
RGPD2
RGPD1
INPP5K
KCNH1
MOK
CUX2
ZNF843
GOLGA8B
OR51H1
DNMT3A
STXBP3
PARP1
TPM1
ZSCAN5A
PIPOX
RBM28
TEFM
ESYT2
SVIP
NFIB
ATP5PO
RAN
SKA3
MRPL57
RIOK1
CAGE1
LRRC59
EEF2K
CARMIL3
RHBDD1
ZNF799
GABRA1
LINGO2
FADS2
FADS1
SOD1
ZFP1
GRAMD2B
IL12B
SEC31A
THAP9
CCDC88A
PIP5K1A
PCSK2
NME2
USP25
CSNK1G2
WNT1
CFAP65
TTC13
FXR1
EIF1AD
BANF1
NOXA1
DRD2
EIF5A
DHRS13
CHCHD6
CCDC92
HIBADH
DPEP2
GSTP1
INTS8
DENND1B
CETN3
TTC26
INO80C
INO80B
AP3S2
CTCF
RAB4A
CALHM6
SLC25A22
SLX4IP
MMP24
HIPK1
RXFP3
NWD2
SLC35F1
TPT1
NUDT10
CKMT1A
NCAM1
GABRG2
NECAB2
TEX19
COMMD2
D2HGDH
ANKRD34C
FBXL19
ENPP1
F2RL1
FLCN
GPR6
CAB39L
UTP3
NEK10
DAGLA
GUK1
RBFOX2
C1QBP
SPAST
SPCS3
POLA2
CDC37
HDAC2
PGBD5
KLHL32
NDUFAF4
EIF2B3
PDPR
IGF2BP3
JPT1
DPEP3
TMEM200B
PWWP2A
ECSIT
SNX16
IGSF9
STK11IP
USP38
HDDC3
DRG1
FABP6
SYT5
DSN1
RNF126
MTF2
SCG3
UBOX5
FASTKD5
WNT2B
MTCL1
ZFYVE1
KDSR
TPD52L1
PAAF1
COA4
RRP12
DDX19B
C3orf14
TIMM21
FBXO15
SH3BGR
UBE2R2
LCA5L
TMEM221
FANCC
POLR2J3
ATG5
ADCYAP1
LOC100421372
HSPA14
CDNF
AFTPH
CHAMP1
GNAI2
LENG8
RGMB
ZBED6CL
HDGFL3
NPDC1
ATRN
UTP20
MIS18BP1
FBXO33
HNRNPR
SLC10A7
KCNS2
DEF8
MAP3K12
CDK7
IQGAP2
NOLC1
IFRD1
SEZ6L2
ASPHD1
MSRB3
RILP
ANKHD1-EIF4EBP3
ANKHD1
RABL2B
ATL1
MTMR6
GALK1
LRRTM3
GPATCH8
AFF1
ZNF135
CHST11
INTS12
GSTCD
SLC25A40
DBF4
DST
NPM1
CRYBG1
ZNF234
NXPH1
MTRES1
SPRED1
NDUFA4
SEMA6D
RPS24
BOLL
STON1-GTF2A1L
STON1
NAGPA
YARS1
S100PBP
SHQ1
CUL9
TUBA1B
MTMR7
CDH10
CAPN7
CALCOCO1
FAM76A
THEM6
EPRS1
DCAKD
NMT1
SKP2
LMBRD2
GDPD5
U2AF1L5
U2AF1
MTFR2
ZNF791
ZNF490
KIF22
HOMEZ
CASP7
ZBBX
CHGB
RBM8A
SIRT4
RNF115
POLR3C
BARHL1
COX16
CRH
SECISBP2L
RBM7
C11orf71
C16orf72
KLHL8
COL21A1
NDUFAF1
CNOT4
MFF
ZCWPW2
AZI2
SLC17A6
OSBPL1A
SERPING1
ING3
OGDHL
PRUNE2
INTS5
PGAP2
RHOU
KCNK5
CDC37L1
NUDT15
MRPS18C
HELQ
GOT2
NSUN3
DHFR2
FASTKD1
TRIM38
CNBP
ST18
UTP25
PPP6R1
MESP1
PSMD9
HPD
PLEKHM3
FBXO4
NADK2
ZSCAN12
IRS1
TLR5
TBC1D5
GNB4
STK19
DXO
PARP2
SGSM3
SLK
BCL2L12
PICALM
CRNKL1
CFAP61
FBXO5
DPH1
SCNM1
LYSMD1
CBLB
LRWD1
ALKBH4
RAB3A
WRNIP1
MARCHF8
ST3GAL3
MTHFR
CLCN6
GLIPR1L1
CAMSAP2
RWDD3
STRBP
LTBR
SCNN1A
MFSD1
PRRC2B
RAPGEF6
ATP6V0D1
RMDN2
ZSCAN9
COBLL1
ESRP1
CD109
FANCD2
KLHL20
UIMC1
SRRM4
DNAJC13
LZTS2
ZNF524
FIZ1
FBXO40
TTC21B
ARHGEF12
MIPOL1
EFHC1
ZNF667
ECHDC1
THBS3
EDEM1
IPO4
TMEM248
TATDN3
NSL1
MSH2
SMOC1
HDGF
BEND3
DPF1
CACNG3
COX18
WWC3
WDR17
TMEFF2
PMAIP1
UTP11
WDR11
MCM10
ATXN2L
FBXL13
ARMC10
GINM1
H3-3B
DENND6B
ZNF620
MRPS36
EIF2S1
ATP6V1D
CDK14
LMBR1L
RNF187
NUP35
ZGRF1
LARP7
DISP2
SLC16A3
SMC5
ROBO3
NME7
BLZF1
BRMS1L
TESMIN
LRRC27
STK32C
IPP
RIPOR2
SYNJ1
SST
ZNF740
CSAD
MTA3
MYCBP2
SPRY4
FLYWCH2
KLF5
FLOT1
PERP
C14orf39
TLCD4
TLCD4-RWDD3
TOX4
RAB2B
ATF6
CCDC97
WDR90
MORF4L2
AK4
NFE2L2
CLVS1
EPC1
AUNIP
BBS9
CELF4
TMEM271
MRPL40
HIRA
RGPD8
RGPD5
AEBP2
SPEF2
SYT14
FRG1
C11orf52
LPCAT4
C2CD4A
CORO6
ZNF331
WDPCP
MDH1
HNRNPA1L2
SEC62
PTGR2
C1orf194
CORO1C
CUX1
ELL2
ST6GALNAC3
TIMM9
KIAA0586
ZBTB40
TMEM259
C9orf85
ABHD17B
GJC1
NUDC
SLC4A8
TSR3
GNPTG
CYREN
PTPRN
NUS1
BFSP1
SEZ6
SNAPC3
TAF1B
FAM124A
LMBR1
TANC2
QTRT1
FAM133B
ZNF558
NAGK
ZNF410
HEMK1
PTPN4
ANAPC11
ALYREF
PEX5L
LZTS3
GNPDA2
NT5C3A
IDE
IBA57
PIK3R3
SRRM1
ESD
IL12A
PIEZO1
SYP
BICDL1
FRYL
FAM120B
TSPAN19
LRRIQ1
TMEM60
PHTF2
NCLN
CTDP1
EFEMP2
STIM2
SLCO5A1
RAD51AP2
SCFD2
SF3A3
MRPL21
IGHMBP2
THAP7
AP5Z1
POLI
NLRX1
TMEM214
SPATA6L
PLPP6
TRAF3IP1
FILIP1L
GPR55
PCOTH
MIPEP
DDHD2
POT1
PCYT2
CIC
CXCL5
FH
LRRC37A3
USP4
RBM27
PPIB
IL17RD
PTGES3
IL17D
TOP3B
TIMM17A
FAM207A
OIP5
NUSAP1
SLC30A6
PGGT1B
NRSN1
PATL1
OLFM3
KDELR2
GPC4
VPS50
HEPACAM2
MRPL44
MFSD14A
CDK11B
UNC80
CHGA
TMEM263
TRIM46
TP53I3
INIP
RCC2
H4C9
KDF1
BHLHA15
RGMA
GDF3
CRKL
MAN2C1
ERI1
B3GALNT2
SLC37A4
CYSTM1
MARCHF6
KLRG2
PIK3R2
TMEM179
FBXO6
NYAP1
DNAJC11
SMARCD2
E2F6
CHRNB2
EPHA3
NPAT
ATM
SMPD4
MZT2B
GALE
PCSK5
EID1
VGLL3
GTF2IRD2B
CLDN23
PLCH2
HEYL
AHCY
VTA1
NMBR
PIH1D2
NKAPD1
CCDC92B
PDE8A
DENND2B
OBI1
YIF1A
RNF145
NUP155
ZNF786
FAM162A
CCDC58
CAMLG
PRLHR
PRKCE
MUS81
NAA80
HYAL3
MFSD13A
TRIOBP
ZNF155
RUBCN
DCAF4