ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1053986 | iPS cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◣ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX2023732: iPS derived cardiac cells

◢ SRX2023764: iPS derived cardiac cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX4732741: Pre-B cells

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

POLR3H
CAMTA1
GSN
RAB14
NPAS4
ASF1A
KCTD18
KDM2A
ZEB1
DNAJC5
GPR158
CALR
VIM
D2HGDH
ASMTL
ZNF77
MFSD14A
GOLGA7
ANKRD31
RAP1GAP
PARD6B
TDRD7
CCDC106
POM121
NPPB
SEC24B
GJC1
IFT46
MTDH
PPM1B
JUND
KHK
TCF4
FAM50B
SLC35A4
APBB3
LARP1
KXD1
MAP2
ZSWIM8
DPEP2
CCDC88A
VPS9D1
ANTXR1
SRSF11
DTX1
CBLL1
STAG1
SNX1
JADE1
FBRS
TM7SF2
UBE2I
ZNF558
LSM14B
DHDDS
KDM5B
PKDCC
HTR5A
FNIP2
VARS2
PRICKLE1
IHO1
PDXP
ZNF555
KIAA1586
PABPC4
ERG
RNF187
HAGHL
CCDC78
RASGRP1
STX6
ARHGDIA
CYB5A
CTCF
FRMD8
USP54
TMEM214
SDHB
CRYBG1
MARCHF4
SUN2
RNF170
HOOK3
ELL
GADD45G
L3MBTL4
S1PR2
EPHB1
TPM1
CUX2
TMEM259
CYP4F11
BEND3
PRRC2B
OTUD1
ACCS
RPS19
MPP5
NEIL3
HSPA9
TEAD1
TIPARP
TMEM248
EIF5B
TXNDC9
MAP3K20
MEI4
VOPP1
PAQR3
IQSEC3
CCDC107
DDX18
DNPEP
PPDPF
RNGTT
MT3
TTLL4
ZBTB47
SOD2
WTAP
CUX1
JMJD7-PLA2G4B
JMJD7
TDRP
SERPINB6
PXMP4
IQGAP2
ZNRF2
KLHDC7A
RHEBL1
POLI
PIPOX
PSMD6
NAMPT
TMED7-TICAM2
TMED7
CAPN7
NME2
DIAPH1
CERCAM
PHOSPHO2
CCDC173
ZNF316
ATAD3A
REEP5
ZNF620
FABP6
PIEZO1
IREB2
MAP2K1
RBM4B
MYO18A
HILPDA
YTHDF2
CCDC181
ANXA5
ZBED6CL
ASAH1
GDPGP1
CIB1
FZR1
NDUFC2-KCTD14
NDUFC2
TMED9
TMCO3
DCUN1D2
CBLB
DISP3
IRF1
SMYD5
NTAQ1
MMAA
SCFD2
IBA57
UBE2R2
MAPK3
SMIM12
GALE
FA2H
CDT1
ADAMTS17
CSK
AK4
LAMP1
PTPRO
TAFA4
CLK3
WWC2
ANKRD34C
GOLGA7B
BTF3
RAPGEF6
PARD6G
CYREN
INTS13
FGFR1OP2
QTRT1
WDR81
INO80B
MSH2
FUOM
SALL2
NSUN4
SPRY2
KCNMB2
ZNF721
PIGG
SEC63
CHRNB2
ST3GAL3
IL12B
KCNB1
SLC25A40
DBF4
ESYT2
ILVBL
CPLX2
PGAP6
CACNG2
UHRF1
KLK13
MRI1
DSCC1
TRAPPC9
WDR74
PSEN2
RAD54B
C11orf80
DNMBP
FSBP
STAT3
LNPEP
GPSM3
IGSF9
CEP83
WASHC2C
ASXL1
RFX4
FBXO4
DEK
PDP2
TMEM170B
DST
CALCOCO2
TUT4
HEXA
ADRA1B
BARHL1
ZNF546
SLC39A13
DPY19L1
TBL1XR1
TMEM97
ZSWIM6
ILDR1
P4HA1
SERPINE2
PATJ
ADCY3
SEC31A
THAP9
CLDN1
NBPF1
BARD1
PRSS12
GLI4
DMRTA1
ZNF584
SYNPO2
TDGF1
CORO1B
ZBTB7B
TES
CUL9
LACTB
PIP5K1A
ABCD3
CAMTA2
PRPF40B
MAP2K7
ABCG2
KLHL36
PGAM5
CDC14B
UBC
KLF10
COPS7B
KIFC3
ARHGEF3
EXOSC5
BCKDHA
SLBP
ZFP69
DENND6B
TMEM181
ELOVL2
WNT9B
FAM117B
TMEM231
POLR2J3
C2CD5
YPEL2
SLC25A42
TST
MPST
ARHGEF5
TOM1L1
HEATR5B
GPATCH11
ROM1
EML3
ARHGEF35
SGSM1
STARD4
RNF217
PLSCR2
CEP135
ADCK1
ELOVL1
MTRNR2L2
XKR7
MTRNR2L8
CYB5R4
GBA
RBM48
PEX1
RAB37
RGPD2
RGPD1
HPCA
TPH2
CRBN
SNAP25
EPHA10
SUMF1
UTP20
STX16
NUF2
NME1-NME2
NME1
FANCD2
VPS50
HEPACAM2
SLC39A3
CELSR3
SVOP
NAGPA
TMEM242
ZNF335
WASHC2A
TTC26
EIF2D
MAPK8IP2
SPNS1
TRIP4
RRP15
SSBP1
INTS12
GSTCD
SMG8
IDH3B
GLRA1
SPOP
MTFR2
UTP25
L1CAM
CHGB
VPS33A
FAM227B
DTWD1
EIF1AD
BANF1
AHCY
ZCCHC7
NEURL2
CTSA
ZCWPW1
MEPCE
NEUROD4
COMMD2
NUP214
KIF18B
ATL3
WASHC5
NSMCE2
IPO4
GATB
TXLNA
UBE3B
TBC1D19
CRNKL1
CFAP61
RBM19
NOL8
CENPP
CCNA2
SCRT1
GTF3C3
NUP107
KIAA0895
BIRC5
PSMD9
HPD
ITGB3BP
EFCAB7
HMGB1
NEK2
ESCO2
SFSWAP
DHX40
PEX3
ADAT2
TRMT1
ZC3HC1
WDR36
HDAC2
CDK5RAP1
RBBP5
MTRNR2L9
COMMD9
IQGAP3
EXO1
CFAP54
ATG14
CCNG2
FBXO5
UBE2O
AANAT
STX18
OSCAR
NDUFA3
TDRKH
TSFM
RFC1
EIF3F
UTP11
PAXBP1
C8orf33
COX16
HAGH
FAHD1
SF3A3
UBFD1
PAFAH2
EARS2
MED23
PLEKHM3
MIS18A
TOP3B
SGO1
KIF20A
BRD8
TACO1
CENPF
DRG2
FXN
VTA1
NMBR
NCAPH
PGBD5
TOMM22
CSTF1
AURKA
HIBADH
RPS7
SAP30BP
RECQL5
MTF2
RRP12
LRRC59
NFE2L2
MRPL44
GET3
SUPT7L
SLC4A1AP
PWWP2A
GPATCH3
TIMM17A
ZNF830
CCT6B
NDUFS7
RABGAP1L
RTTN
MTBP
MRPL13
RBM28
TICRR
EBAG9
TMEM199
POLDIP2
METTL1
EEF1AKMT3
TRMO
TSR3
GNPTG
KLHL18
KIF9
CKAP2L
USPL1
WDR11
NUP54
FANCI
DPF1
ATR
NDUFS3
KBTBD4
CPPED1
SPATA2
PBK
USP35
KCTD21
PDE1C
RGL1
EIF3H
YARS1
POLR3F
DZANK1
RRM2
USP30
RAE1
TRAPPC6A
BLOC1S3
TROAP
RTN4
SLC25A51
GTF3C5
ARPC5
UNG
SKA3
MRPL57
N6AMT1
CRKL
COMMD4
EDC3
ZAR1L
BRCA2
RRS1
ZCCHC4
GDAP1
NLE1
MTIF2
ANLN
LTV1
CCDC59
BLOC1S1
ANAPC5
XKR9
LACTB2
XRCC2
ATP5F1E
S100PBP
KLHL20
DNAJC11
FAM207A
EBNA1BP2
CFAP57
TIGAR
CCDC86
NOP16
HIGD2A
RAD51AP1
C12orf4
RAD54L
VPS29
RAD9B
YIF1A
SRRM3
SELENOH
PDE4C
SNRPB2
MARCHF8
TMEM41A
HUS1
FAM133B
MTRNR2L10
KDM1A
ZFPL1
CDCA5
DCAF10
TRUB2
COQ4
RFX1
SLX1B
SLX1A
BOLA2B
BOLA2
PUS10
PEX13
BCAS3
ANKHD1-EIF4EBP3
ANKHD1
ANK1
PIH1D2
NKAPD1
MRM3
MFSD1
GLOD4
MRPL40
HIRA
SEC13
PFDN4
CKMT1B
TTC27
NUDT15
MRPL39
C12orf66
KRR1
MRPS18C
HELQ
CDC6
NOL6
SYNJ1
SMARCD2
OAZ3
MRPL9
GTF2H3
EIF2B1
TRMT6
MCM8
LSG1
OGDH
TMEM222
PUM3
RBM42
GRWD1
SASS6
SUGCT
MPLKIP
CCNB1
SSNA1
ANAPC2
RAB18
BUB1B
SLC12A9
HES3
TRIAP1
KLHL32
FAM98B
TEFM
TTC31
BOD1
NDUFAF5
ESF1
BNIP1
MOCS3
DPM1
AAR2
DMAP1
POLR2J
GON4L
SST
ADPRS
DLGAP5
CWC25
FRA10AC1
PSMD3
ENOSF1
CLVS1
NSA2
GFM2
C10orf88
WDR4
SLC45A4
NUP35
AURKB
UFD1
CDC45
DCLRE1B
AP4B1
DNAJC25-GNG10
DNAJC25
VPS37D
CCDC146
SLC33A1
PIKFYVE
MRPL27
EME1
TFIP11
TSEN54
GTF2H4
CASKIN2
CDK7
SGO2
NTSR2
H6PD
SDAD1
NGDN
AP3S2
STMN3
ARHGAP45
DNAH7
ZNF668
ACVR1
MRPS35
INTS7
DTL
NOS3
TATDN3
NSL1
NDUFAF4
MRPL21
IGHMBP2
FRMD3
TTC9B
DPY19L4
CFAP299
SYT11
MRPL3
STEAP2
MIS18BP1
CACNG3
SMIM30
PSMB7
ZNF391
RAD51
TOP3A
SMCR8
NMNAT1
LZIC
GCDH
PARPBP
NUP37
CENPW
GATAD2A
TBRG4
BOLA2-SMG1P6
TSEN15
SHC1
CKS1B
SEC22B
PRRT3
THAP10
LRRC49
DZIP3
CIP2A
H4C15
H4C14
FAM98A
SLC44A1
MCM10
PRCP
DDIAS
C17orf75
ZDHHC24
ACTN3
SCG3
MCM7
AP4M1
CDC73
MMP24
GTF3C4
DDX31
CCDC77
ALKBH3
GTF2H2C
DIABLO
TCTN3
ZGRF1
LARP7
DNAJC2
PNPT1
CYRIB
U2SURP
CEP128
BBS1
SYF2
EIF2B3
LSM5
MITD1
AGK
ALG10
TAMM41
NET1
IPO11
DDX49
COPE
TRIP13
MRPS15
DHX37
CDK1
BRD9
UBE2L3
CCDC92B
C2orf42
PPP6R1
C12orf73
TIMM9
KIAA0586
ACBD6
OPA1
DNAJC6
FBXO48
APLF
RING1
RNF166
CTU2
MTR
C16orf71
ANKS3
RPAP3
USP2
OS9
GTPBP10
CGGBP1
GTF2H2C_2
ALG10B
TFPT
SUPV3L1
PRPF31
ZFYVE26
LZTFL1
RGPD8
RGPD5
PPM1H
PPWD1
CENPK
MYBL1
KIFC1
FAF1
STAT1
SCRT2
MRPL48
CDC25A
FAM228B
PRPF18
MRPL1
VPS11
RUVBL1
FNBP1
RPTOR
RBM45
NDUFAF1
ATXN2L
YBEY
SCP2
MAD2L1
FAM72C
SLC24A1
OIP5
NUSAP1
INTS14
BMS1
ACVR2A
AEBP2
UTP3
TAF3
MYBL2
C5orf51
ANKRD12
NOTCH2NLC
PSME3
DPH1
ALG1
SLC25A26
DNTTIP2
CDK11A
TMEM237
NDUFB3
FAM126B
EXOSC3
ZFYVE1
SMC2
HNRNPH1
ZMPSTE24
CFAP20
PIGU
CEP55
SNRPE
PCNA
GRN
LMAN2
USP15
NOXA1
BLM
VRK1
KIF15
KIAA1143
KAT5
FBXL13
ARMC10
THAP7
RECQL
GOLT1B
NAGK
MRPS23
E2F6
TRIM44
ULK4
PYCR3
SEPTIN9
ZDHHC12
RABL2B
MPHOSPH10
MCEE
DDX21
CFAP298-TCP10L
CFAP298
CENPS-CORT
CENPS
PARL
MNAT1
DSTYK
CDC20
ZBTB45
PPIP5K2
GIN1
HNRNPD
RGPD6
TOMM5
NADK2
COASY
PALM2AKAP2
KDM3A
ELMO1
CKMT1A
CALB1
ANP32E
PDE4A
NOC3L
PSMF1
TBP
NSUN5
TOX4
RAB2B
DHRS13
G6PC3
AURKAIP1
SLC35B1
KDM5A
VPS45
DNA2
KIF2C
SCRN3
RAD54L2
CIR1
PPIL3
NIF3L1
CCNL1
TOR1A
RTF2
REXO4
SMG7
MRPL16
PC
FAM111A
EMC4
TSN
TAF13
MAN2C1
SF3B6
QTRT2
CCDC191
HBP1
GFM1
ZC3H15
TMEM101
TIMM10
ZNF473
VRK3
POLR3B
PCOTH
MIPEP
TRMT61A
POC1A
AMZ2
PAK1IP1
C6orf52
TFB2M
SHCBP1
CNST
RUBCN
COPS4
FCF1
AREL1
ABT1
ERAL1
DCP1A
TRMT61B
C17orf49
KCNK12
CCAR2
ZNF398
AGBL3
ADPGK
BNIP3L
SCNM1
LYSMD1
CDC25C
SHQ1
NR1H3
ACP2
OXNAD1
DPH3
TTK
LIX1L
STIL
POMZP3
PLS1