ChIP-Atlas: Target genes

Potential target genes for HDAC6

Query protein: HDAC6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: HDAC6 | Average
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC6's Target genes

◣ HDAC6: Average

◢ SRX017706: CD4+ T cells

◢ SRX017710: CD4+ T cells

◢ SRX116458: hESC H1

◢ SRX186767: hESC H1

◢ SRX116425: K-562

◢ SRX116426: K-562

◢ SRX186700: K-562

◢ HDAC6: STRING

KIF5C
MTRNR2L1
PTPRN2
MTRNR2L2
MSH3
DHFR
RGPD2
RGPD1
MTRNR2L8
EAPP
MTRNR2L10
DUX4
MTRNR2L9
EMILIN2
MAMDC2
EPN1
GTPBP6
COL23A1
MTRNR2L6
TAF12
CRYAA2
CRYAA
SPAAR
HRCT1
PHRF1
CNOT3
LOC102724770
DGCR6
CDH11
PMF1-BGLAP
PMF1
H4C15
H4C14
H3C15
H3C14
CCDC200
LGR6
MUC3A
ART1
FRG2
WDR74
STX5
POLDIP3
H4C9
C3
KRT36
KRT35
ZNFX1
MIEF1
ATF4
TMEM107
EEF1A1
C1orf198
H2AC19
H2AC18
EIF3E
FUS
FRG2C
B2M
HSP90AB1
PARP16
MEIS1
DRD4
ANGEL1
SRSF2
MFSD11
ACBD6
RGS19
OPRL1
MICAL3
LKAAEAR1
GTF2B
H4C12
H4C11
H2BC14
H2AC14
FIBCD1
RUNDC3B
H2BC12
H2AC12
RAD23A
CALR
TUBA1A
NUP214
MPZL1
SIRT4
GJD3
H2BC15
H2AC15
RPL27
IFI35
PAX4
DYSF
COL6A5
H4C2
SRSF7
PRDX1
TRAF7
RAB26
H2BU1
H2AW
MRPS18B
ASXL1
H2BC11
H2AC11
RPS27
RAB13
H2BC21
H2AC21
H2AC20
NME1-NME2
NME1
JUN
KIF2C
DDB2
RPS29
NGB
EGR1
TSPOAP1
H4C3
H1-6
PCGF2
NCOA7
BRD2
POLR3E
NAT10
RCC1
PMAIP1
HRK
CASZ1
POLG2
DDX5
CALM2
ADARB1
USP53
KRT17
RNF213
PLEC
MAGOH
AMD1
TUBB4B
TMEM238
TMEM190
STPG3
RPL28
FAM166A
ESYT2
SESN1
SOCS3
RANBP2
SPATC1L
ARRDC2
RPS20
TTI2
RPLP1
PHB2
PHACTR2
ZC3H10
TFPT
RPL41
PRPF31
ESYT1
LY9
SSNA1
RPL10
ANAPC2
TPM3
RALGDS
SNX5
MGME1
PDE4A
LETM1
GIPR
PFKFB3
PREX1
CSRNP1
ALOX5AP
PTPN6
C12orf57
NDUFS7
TAS2R43
MNS1
LUC7L2
FMC1-LUC7L2
FMC1
BTG1
IFRD1
CWC25
ACSL3
RNF149
SP2
ZBTB4
SYTL3
SLC35G6
POLR2A
MAP3K14
DYNLT1
MFSD4B
HMBS
H2AX
DPAGT1
ACOX3
RASA3
HNRNPA1
CWF19L1
CBX5
FAM53C
CDC25C
ARHGAP25
THBS4
RPTOR
MTX3
H2BC5
H1-4
RPL29
H3C2
H2AC4
ASB2
PHF19
ARSG
AMZ2
TNFSF14
MRPL44
SLC43A3
C20orf204
UBC
STX11
PSMD9
HPD
JUNB
ZBTB37
MAPKAPK5
H3C6
H2BC8
H2AC8
DLG2
SH2D2A
NTRK1
PRKCB
IRF9
DEF6
BCAR3
IL1R1
HMGN4
FOXO1
WEE1
TPD52
EIF4G2
TRMT61B
HAX1
DENR
NPAS4
ITPR3
CLK1
AP3S2
ZBTB40
IRF1
BCL2A1
NUP62
IQGAP2
IL4I1
GADD45B
ATF5
SLC7A5
LTN1
ASCL2
RPS6
NPR2
FASLG
TNF
SSBP1
LTA
TMEM210
LRRC26
NUFIP1
NOP58
GPALPP1
WFIKKN1
NOLC1
METTL26
CD226
CAMLG
CAMK1
BID
UTRN
HERPUD1
VPS72
TMPRSS6
PIP5K1A
FCMR
FAM167A
SACM1L
POFUT1
PLAGL2
CSNK1D
ARF6
SECISBP2
PIEZO1
MRPS23
CKS2
TRIM2
SCML1
PLAGL1
ZZEF1
SRGN
ID1
CYB5D2
UNC45B
RPL10A
NLE1
IL17RA
ATP5MC3
IL21R
CCNL1
ATAT1
ARID5B
TMEM230
PCNA
KMT2E
CDS2
TUT1
RSRP1
REV3L
RANGAP1
MTA2
CARS1
STOML2
RUNX1
PIGO
MRFAP1
FAM214B
CSTF1
BAK1
AURKA
APTX
RPS13
LTB
GPR84
ENO1
CDC42
ID2
TLE3
SAR1B
NKAIN1
CENPM
PTBP1
GALK2
DDX19A
COPS2
TLCD1
STK40
SLC3A2
RRM1
RPLP0
RPL23A
RAB7A
RAB34
PROCA1
NR1H3
NEK8
JAML
ITGB3
ILF3
GCN1
EEF2
ACP2
WBP1
OXSM
NGLY1
MRPL24
MAPK1
ITGAL
INO80B
HDGF
H2AZ2
DNAJB1
DCP1A
CDC37
TMEM79
STX10
SMG5
RPLP2
PNPLA2
PIDD1
IER2
GPI
GNG14
FBXW9
EIF1
CBX6
UNKL
TESK2
MTF2
MMACHC
HPS5
GTF2H1
CCDC163
C16orf91
RSL1D1
HNRNPH1
DNAJA3
CORO7-PAM16
CORO7
ZC3H3
NSA2
MBOAT4
GSDMD
GFM2
EHD4
SRSF1
SEPTIN9
RAC2
NOC4L
DNAJC16
DDX51
CASP9
ANAPC10
ABCE1
RNF122
NEUROG3
METTL16
ITPR1
CCDC91
UBE2I
SLC25A11
SDCBP2
RNF167
PFN1
ENO3
YARS1
SNAPC1
S100PBP
KCNAB2
GNG3
EIF4A1
CD68
BSCL2
ZNF79
XPC
TXNRD1
TMEM262
RPL9
PRMT5
MRPS14
LSM3
LIAS
IER5L
ECH1
CAPN15
ZNF132
PPP4R3A
PGAM1
NAA16
MTRF1
GABPA
FCGR3A
EHD1
ATP5PF
APOBEC3A_B
APOBEC3A
ZNF526
NABP1
FBXL22
DEDD2
BTF3
TBL1XR1
MBD1
GPR25
DDIT4
CXXC1
TRAF2
SFPQ
ZSCAN32
ZNF174
NUP54
MYL6B
MYL6
MAP4K1
IFI16
EIF3K
DPP9
DENND1B
DDX21
C2orf42
SRSF5
NANOS3
IKZF3
H4C1
H3C1
H1-1
FAM102A
HNRNPUL1
H4C4
H3C4
H2BC6
TSPAN17
RBM3
ITK
FAM71B
TRA2B
TMEM167B
THADA
TCAF2
SPAG7
SIRT6
SH2D1A
CDV3
ANKRD24
AIM2
TPD52L2
TMCC3
SLC1A5
MTHFD2
ATF3
UBE2Z
TNFRSF9
OR2T1
MAP1LC3B
ISG15
FBXO31
CD5
AGRN
TSSC4
RGL4
PIK3CD
YTHDC1
TTYH2
RPL38
RBM17
ONECUT3
OCIAD1
NR4A3
MORC3
WWP2
NOB1
KIFBP
SF3A3
PAFAH2
MITD1
MAK16
LYST
SEPTIN7
RMND1
NUFIP2
FADD
ARMT1
RUNX3
PTAFR
PKNOX1
OASL
MED1
LARS2
CDK12
C8orf37
NDUFB5
MRPL47
MAP3K7CL
CHPF2
CCT8
C10orf105
ABCF2
STAT1
RBMX
HNRNPA3
RPS15
PFKP
MYO9B
HSP90AA1
HAUS8
SLC12A6
SF3B1
RPL15
RPL12
RGPD8
RGPD5
PURB
PPP1R15A
PLEKHA4
NUTM1
NOP10
NKIRAS1
MYO1G
MGST2
LRSAM1
IL2RA
IL23R
HNRNPAB
CHD8
WDR4
TCTA
RHOA
MMADHC
EIF3J
BANP
TANK
SLFN13
SKP1
SAMD4B
MKLN1
LSM5
GMFG
FBXO32
CITED2
AVL9
AQP2
ZNF101
WDPCP
TRMT2A
SHH
RANBP1
RAB6A
MDH1
ETFBKMT
ATP13A1
ZNF655
TOX2
SCAF11
RBM18
POU2AF1
MRRF
MRPL55
LRRFIP2
KIF15
KIAA1143
HEXIM1
CPNE5
COX5B
AMY2A
SLC2A8
SLC25A51
ROM1
EML3
CLN3
B3GAT3
APOBR
ZNF106
SPRYD4
SNAP23
RPL22L1
RIPOR2
C19orf48
ZNF704
RETSAT
CD209
ASXL2
TMEM101
SNX9
SIT1
NLRC5
KRR1
GPN2
GIT1
CCDC107
ARHGEF39
ZBED6CL
TSPYL2
TNK2
PPP1R8
MSL2
METTL3
LRRC61
LONP1
CCNT1
CATSPERD
ACTR3C
TMEM259
RHBDD1
PNP
PIP4P1
COX8A
CNN2
TRAPPC10
SH3BGRL3
PPIL4
DNAJB4
CELF1
ZNF207
ZMPSTE24
TXN2
TBL3
SUPT5H
STT3A
SNRPE
SHF
RSL24D1
RPS2
RPS16
RNF151
RFFL
NDUFB10
MOK
LAX1
H4C6
H1-3
GFOD1
ENOSF1
EFNA4
CCM2
C17orf75
ALG10B
AEN
ZBTB21
TREX1
SHISA5
RPF2
MRPL45
GTF2H3
EIF2B1
TRAFD1
TOGARAM1
SERP1
SEMA3B
RPS12
RHEBL1
RBM25
NOP16
NDRG1
MSL1
LSMEM2
KSR1
KMT2D
KLHL28
HIGD2A
FURIN
EIF2A
CD69
CASP8
BTRC
ZNF764
SCAND1
NDUFAF3
LMNA
IMPDH2
IER3
FLOT1
DNAJB2
DALRD3
ASMTL
TBRG4
SERBP1
PRRC2C
POLA2
PEX12
OSM
MBD6
LPIN1
FAM241A
DDIT3
CAMSAP1
C16orf89
AP2B1
ALG1
ZNF320
PLD6
ATP5MC2
ZNF3
VTA1
UNK
RRNAD1
NMBR
ISG20L2
H3-3B
DDI2
CRADD
COPS6
CCR7
ATG5
TATDN2
SPHK2
SPG7
SLC2A11
RPL18
NCK2
ITPRIP
ITFG2
GTF2IRD1
FAM83E
VMAC
TRAF5
TMEM70
TMEM109
TCF7
PRPF19
NECAP1
NDUFA11
IER5
H2BC4
H2AC6
FOXD4L1
ELOC
TAP1
SPATA5L1
SLC34A3
RPL14
RNF224
RNF208
QTRT2
PSMB9
PSMB8
MRPS7
MIF4GD
GGA3
GATM
FAM174C
DUS2
DPEP2NB
DDX28
CYSRT1
CIRBP
CD53
CCDC191
CCDC174
ANGPTL4
NDUFS6
NASP
MRPL36
MCCC1
IARS1
HSD17B12
H3C13
H2BC18
FAM227B
DTWD1
COG3
ASB8
ADORA2A
TMEM242
SLA
SENP8
RPL34
PITPNM1
NRIP3
MYO9A
MAP2K7
MANSC1
KIF26B
BORCS5
USP7
TMF1
SLC26A2
PPME1
MORF4L1
CD55
CCAR2
C8orf58
C2CD3
ZNF688
WDR19
THOC1
PRDX2
MZF1
CHST11
ARF4
VCPIP1
TUBA1C
PPM1K
NPM1
METTL1
LHX9
KANSL2
IPO7
GOPC
EID2B
EID2
EEF1AKMT3
CYP27B1
C8orf44-SGK3
C1orf53
YPEL4
TOMM5
TICAM2
RPS3A
RBPJ
N6AMT1
DSTYK
CLP1
CD96
TESPA1
TAF1D
PRR14
OXCT2
GTPBP10
FBRS
CCND3
C11orf54
AMN1
XRRA1
VASP
SPCS2
SMIM12
SACS
RTN2
RPS11
RPL13A
RPA2
RHCE
PPM1N
NXF1
NACA
MACO1
LRP8
LBH
IL10RA
HM13
HIBADH
DMXL1
ABCD3
SNRPB2
SF3B5
MORN3
IFNAR2
DYNC2I1
APOBEC3B
SART3
RNF126
PRRT2
PNPLA8
PAGR1
MVP
MAZ
LRRN3
ISCU
GPR68
EMP1
DDX18
CLK4
TOMM20
NFKBIL1
GPR18
FAF1
ERLIN1
DDX39B
CDKN2C
ATP6V1G2
ZFC3H1
TOMM6
TMIGD1
THAP2
SLC30A6
SLC25A23
SEC14L1
PRICKLE4
NXPH3
HILPDA
FRS3
CRB3
ACTR1B
RAB11FIP1
PTCD2
POLG
MYO18A
MRPS27
MLH1
GPR183
EPM2AIP1
REPIN1
NOL7
NFU1
LSM14A
HSPA1B
CAVIN2
USPL1
SARAF
NFYC
MKRN2OS
MKRN2
LONP2
INSIG1
HMGB1
G3BP1
EIF4B
ABCC11
ZNF589
ZBTB45
UQCRC1
SLC30A5
SLC27A5
SLC25A45
SENP7
PARP2
MFSD8
MED18
MARS1
LDHA
FRMD8
FBXO4
FAM78A
CCNB1IP1
ARHGAP9
ABHD18
SETDB1
PPAN-P2RY11
PPAN
P2RY11
NDUFB6
MIS18A
MAP1B
ELK4
CTDSPL2
ANGPTL6