ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX748433 | HCT 116
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◢ SRX748420: HCT 116

◢ SRX748425: HCT 116

◢ SRX748426: HCT 116

◣ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX150698: Hep G2

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX702028: hESC HUES64

◢ ERX159250: LoVo

◢ ERX159251: LoVo

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

SCRT2
MIA2
CRYBG2
ACSL5
LOC100509620
SKIV2L
NELFE
SEPTIN4
LENG8
CCDC107
SIAH2
URGCP-MRPS24
URGCP
EPS8L2
DEAF1
NR1I3
SPAAR
HRCT1
LTB4R
LTB4R2
CIDEB
ATXN7L1
CDHR2
PHF12
KDM6B
CYP17A1
NDUFS1
EEF1B2
SFRP5
EXOC1
MAMDC2
SLC20A1
PCNX3
MAP3K11
CSTF1
AURKA
PLXNB2
SEC13
ABCC3
C19orf33
B3GNT3
SPON1
C11orf86
CAMK2G
LASP1
SNTB2
DNAJC25-GNG10
DNAJC25
NCS1
MTRNR2L8
SCARB1
ERICH3
RAB17
KIAA2013
TIGD3
RCOR1
ROCK2
CLCF1
ALDH2
FUT5
CFL1
SLC9A3R1
NEK2
INPP5J
ATP5F1D
MIDN
RCOR2
ACY1
PTP4A1
SLC27A5
C2CD2L
HDGF
INAVA
SERINC2
PPP1R12B
S100A16
CHST11
RGS3
RIPK4
RAD50
VGLL4
IST1
CSNK1A1
GNAL
CREB3L3
ZC3H12D
ARHGAP27
GJB1
MEAK7
CTSE
SHTN1
GPX4
MTRNR2L2
MSH3
DHFR
PRUNE1
MINDY1
SLC41A2
SMIM29
MYD88
ACAA1
MPI
BLVRA
PAX2
IRX4
SH3D19
ENDOD1
LBX2
PCGF1
NGRN
PLA2G2E
C19orf12
CD86
RAPGEF1
SPTBN4
BLVRB
ZFP36
PLEKHG2
C10orf105
MTMR11
EDEM1
TLCD4-RWDD3
TLCD4
FHL2
PEMT
UBTF
C1QTNF1
CCDC90B
PEX11G
MYRF
PLAAT3
SH3D21
ZNF764
SCAF11
C1orf174
ANXA11
PRKCD
RTL10
GNB1L
ROMO1
USP37
CNOT9
INTS4
STAP2
MPND
TRIM55
SPG7
ITGA3
GAB1
RBKS
BABAM2
SFXN3
PDZD7
TJP3
KIAA1549L
TTC31
TNFRSF10B
PIM3
MIIP
ANKRD66
ADRA1B
SELENOP
PGLYRP2
GNB1
PRMT2
PTPRF
KNL1
GUCA2A
CA9
ARHGEF39
ERBB3
KRTAP5-7
ERCC6L
CERS2
TINAGL1
DCLK1
TDP2
ACOT13
YARS1
S100PBP
CCDC142
OXCT2
SEC23A
APOA1
ARNT
ACAA2
NR6A1
AFF1
CLRN3
MAP4K5
ATL1
PTS
POLD4
ATG16L1
USP2
KDM4B
INTS9
HMBOX1
PLK2
PCBP1
TCTEX1D4
BTBD19
RFFL
NR1D1
DNAJC22
CITED2
PEPD
MTFMT
KPNA7
PRKCSH
CCDC151
PRDM10
RASSF1
C10orf90
C11orf24
ZFAND3
TOB2
PTDSS2
ANO9
CDC14B
KIF4B
UBE2R2
CEP152
PRR3
GNL1
CCL20
ERBB2
SECTM1
NOSTRIN
SMAD3
EEPD1
IDH1
PPIP5K2
TECTB
RBP2
MIA3
SF1
CBY3
CENPVL2
CENPVL1
CORO1C
BRCA1
USH1G
AWAT1
DKK1
C2orf88
LGALS1
C2CD2
PCYT1A
GSTM5
CPLX2
ABHD12B
ARHGDIA
MMACHC
MBD3
MSH5
CLIC1
GPR137
RGPD2
RGPD1
DHRS3
RNF217
MVP
ALDH3B1
PPP1R37
HCAR3
SLC19A3
ELL
MBLAC1
CTSO
TMCO1
MYOG
LSM1
BAG4
TOGARAM1
KLHL28
CDKN1A
NRCAM
SMARCD2
ZNF696
GLRX
HERC5
C19orf84
SLC7A5
PDPK1
EIF4E
CEMP1
PABPN1
SLC39A6
ELP2
DOT1L
TMEM82
RPS3A
PHOSPHO1
RBIS
DENND1B
TNFRSF1A
TLN2
NAE1
TAB2
LRP1
SPTBN1
PLAA
IFT74
KLF6
GAL3ST1
POLRMT
GIP
RARA
TMEM171
ACOX2
DOCK5
KMT5A
TEAD4
ARPIN-AP3S2
ARPIN
SH3BGRL2
SYT12
KLRC2
METTL7B
ABLIM1
IGF2BP3
SLC38A10
SHPK
CTNS
METTL27
PLIN1
MSLN
COPS4
RCAN1
DKK4
TRMT11
SFT2D3
TMEM183A
PDXP
IQCN
MLLT10
ABCG2
IL20RB
CALML4
PDGFRL
HOXA3
AHSP
FBXO46
PPP1R27
MCRIP1
CDC6
MAP2K3
DENND1A
FCHO2
NFKBIB
TMEM214
SIRT2
NQO2
GADD45A
SGO1
AMN1
CPHXL
LIPK
SPAG8
HINT2
YAP1
JUND
SQSTM1
MGAT4B
OCIAD2
BIRC2
RUNDC3A
PHETA1
SH2D5
RASSF2
TRIM2
SAXO1
RRAGA
SF3A2
PLEKHJ1
LOC100129484
SLF1
KIAA0825
DENND5B
IQGAP2
TES
TTI2
FASTKD1
PANK1
MBNL2
PNPLA1
IRAK2
WDR81
CD2BP2
C1QTNF6
GPR171
IZUMO3
UBA5
FAM3C
GAPDH
UNK
H3-3B
HSD17B4
FXR1
CIDEC
ASB2
NFIB
PLCXD2
UBA6
PNOC
AHCY
CHD9
FAAP100
ROM1
EML3
PHACTR4
VTN
SARM1
MTRNR2L1
PIKFYVE
IFRD1
COPZ1
FAM110C
TACR2
PMVK
DHRS7B
SDC1
CLASP1
EREG
CAPN2
PACSIN2
ABHD2
IRAG1
LY75-CD302
LY75
PYGL
PITPNM1
ZMYND8
SNRPF
ADI1
PPID
NCOA4
DYRK1A
PRXL2A
COQ5
RPL23A
RAB34
PFN1
ENO3
SLC25A24
RNF167
CCND2
GOLGA4
ARHGAP32
MRPS11
MRPL46
CERS4
TRAPPC4
RPS25
LAMB2
STX18
TRIOBP
CRK
MFAP4
PYCARD
MLPH
PPP1CC
MLF2
WDR27
C6orf120
SHISA5
PJA2
SEC16B
MRPS28
NFE2L1
KRT86
TAGLN2
PMEPA1
LHB
LAMP3
NECTIN1
TMOD1
STK24
ZSWIM7
TTC19
KCNQ4
IL32
MXD3
SOS1
TKFC
DDB1
APOL4
OCIAD1
ZNF207
RRAGD
CARD19
SENP6
CREBRF
PLXDC1
ZNF367
GNPDA1
HASPIN
SESTD1
PYY
NAGS
WDR77
ATP5PB
TMEM120A
TAOK3
SUDS3
FBXW5
C8G
RAD18
PRDX6
SEH1L
CRPPA
TBP
PSMB1
PRR7
BLCAP
MRGPRF
PPIH
MAPK8
TDRD1
CCDC186
SH3BP5L
IQSEC2
RPL10L
CHCHD2
SHFL
NAV2
BEGAIN
LYPD2
C16orf74
KRT8
KRT18
CIBAR2
KREMEN2
PAQR4
IBTK
AQP1
TRIM29
SHF
RHOC
TUBAL3
DENND2B
ADM
SEMA3B
FAM185A
PRAP1
SLC25A28
TTC36
RPL27
PLEKHG3
SRSF4
IRF2BP2
TMEM120B
KRT19
TMC1
SMIM19
SLC20A2
FLVCR2
CEBPG
ALDH3A1
RNF113B
ATXN7L3
CA7
ACADM
SPINT2
DAPP1
MTMR4
GDPD1
NLRP3
BORCS7
PPM1D
SMYD5
STK11IP
SHC2
SPTBN2
EPS8L3
GATAD1
RPP25L
P2RY4
IRF2BPL
STN1
GCLC
ANXA2
PGAP3
C9orf85
ABHD17B
TBC1D22A
ADGRG1
ALDH3A2
ASAP2
UBC
ANGPTL4
TMEM169
PECR
CD200R1L
SERINC5
COMT
ARTN
ARHGAP29
NUP107
CNOT6
UTP14A
ARHGAP12
TIRAP
GPD2
ZC3H10
RPL41
GUCA2B
GPT
SLC2A9
PPP1R3G
DBP
DAD1
NAT2
GLTP
GUCD1
RABGGTB
SF3B5
RAB37
SMAGP
FGF23
SLC26A6
ARSB
TMEM121B
SPDYE14
SPDYE10P
CASTOR2
AQP3
HPCAL1
CMPK1
POT1
CYP26B1
CCDC200
MAFG
C1orf105
PRX
INF2
RENBP
APOBEC1
GLO1
SLC16A4
ARPP19
HKDC1
IGSF23
DIS3L
ERICH4
DMAC2
SLC7A8
RNF212B
MINDY4B
KDM2A
ENTPD7
SNRPA
C19orf54
PMS2
AIMP2
POLR2H
CLCN2
SELENOI
ADGRF3
PWP1
PPP2R5B
HMOX1
AMT
MRPS30
POLDIP3
PHF5A
ACO2
ZP3
SRSF11
LRRC40
SLC36A1
KDM3A
RASAL3
MXRA7
NFXL1
ATP5MF-PTCD1
ATP5MF
ZNF225
FAM160A2
MBIP
KLK6
MRPS7
GGA3
PPP1R9B
PTGR2
ADGRB1
PRKAR1A
PNPLA2
KCTD14
ARL6IP5
HNRNPH1
KRT7
HSPA5
NPB
BCL9L
PTPN23
BCAR3
RSPH3
ELFN2
CLU
ZMAT1
BCL2L13
ATP6V1E1
FAM20A
SLC2A14
VPS54
H1-0
GCAT
TOMM70
LNP1
ZNF565
ZNF146
SLC25A5
NEDD4L
STARD3
ZNF564
CDC42BPA
MYBPH
SLC6A9
GPR84
KIF16B
FAM102A
FIBP
CCDC85B
PDE11A
TMEM254
ALDH4A1
SRSF5
CALCB
TRIM14
ZNF512B
RASSF5
BPHL
FHDC1
PPP2R5C
LOXHD1
DGKD
RAB3D
TMEM205
CCDC159
SMCHD1
JOSD1
GTPBP1
TRIM15
TRIM10
BAZ1B
CDC25A
NOP9
DHRS1
FLVCR1
ARSG
CMC1
SLC26A1
LRP5
ETV4
NEK6
B2M
CTTNBP2NL
HOXA10
VMP1
PTRH2
LINS1
ASB7
EMP1
SRGAP1
AP1M1
PSMA5
DLX2
CORO2A
RAB30
SLC38A3
PLGLB2
PLGLB1
SP2
RTN4
PRSS12
PCMTD1
DIDO1
U2SURP
ARL17A
GNA12
BAIAP2
CEP128
CEP135
ACTG2
PHF14
ETFA
RDH5
BLOC1S1
C8orf58
GOLGA8B
PTK7
IL1R1
LSM5
TRIP10
GPR108
IFI35
USP16
NPC2
ISCA2
PTTG1IP
DOLPP1
INVS
ERP44
MEF2C
GRAMD4
MYBL2
OGA
GSDMD
TOMM40
ITGA2
HDHD5
TBX1
EHD2
EFNA1
SH3RF2
ATXN2
SESN1
CEP57L1
PLIN3
ORAI1
EFR3A
NRL
DCAF11
G6PC2
MTHFD1L
CLCNKB
ANO1
AMACR
FZD5
CLNS1A
SSTR5
PPP5D1
CALM3
MMADHC
KIFC3
KIF21B
BAAT
GBGT1
SAXO2
EFL1
NCSTN
COPA
TBCA
PRMT1
NUDCD1
ARMC12
HPGDS
LOC730098
CCL27
ZFP36L2
CASP6
NMT1
DCAKD
ARHGAP45
SPRED3
GGN
AGPAT1
RNF5
TLN1
CREB3
MIGA1
TOMM20
RPL35
ARPC5L
WDR38
MGST2
CYB5R3
PET117
KAT14
MED20
BYSL
MTFR2
NR2E1
ASAH1
DCLRE1C
ID3
ASF1B
MEIG1
NQO1
PERP
VTA1
NMBR
RNPEP
GPCPD1
ISCA1
ZNF708
XAGE5
GRAMD1C
TUBG2
MTA1
ZDHHC8
PINK1
C6orf47
NPTN
GPANK1
CSNK2B
NAP1L4
ADGRA3
RTKN
IFNAR2
CISD3
FDXACB1
C11orf1
PLAU
MAN2C1
PDGFB
RIPK3
SERPINA1
RNF121
LOC100133315
RBM8A
OAF
LRRC1
VAMP5
EGLN1
LPP
TTI1
RPRD1B
NCR3LG1
SFR1
CLDN4
MAP3K14
SENP1
PFKM
TMEM94
ATF3
RNF113A
CLDN14
PLIN4
TPT1
BHLHA15
SLC35A2
FGGY
ATP8A1
NIBAN2
APOA2
TSNARE1
LRIG2
TOMM40L
ADPRHL1
IDNK
ACY3
TTYH3
TNFRSF10C
GATAD2A
KLRC3
ST3GAL6
ZBTB7B
ABHD11
CNIH3
UCMA
PACS1
TMEM63A
C3orf52
ZNF230
LEFTY1
NSD2
IER5L
MYC
RFT1
WDR74
RAB43
LOC102723996
ICOSLG
OGFOD2
AURKB
UCK2
ENTPD2
CMIP
MAP1LC3B2
ADAR
CLPP
LURAP1L
SEPTIN9
PLA2G4C
ABL2
IL13RA1
LDHA
SEBOX
TMEM265
PHKG2
CLPX
SLC50A1
HDHD3
EVPL
FADS2
FADS1
RPL34
VPS37D
PPP1R15B
ZNF286A
XBP1
KCNMA1
DOCK6
BLOC1S5
SMARCD1
PSPN
ALKBH7