ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX360584 | GP5d
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX360570: GP5d

◣ SRX360584: GP5d

◢ SRX748420: HCT 116

◢ SRX748425: HCT 116

◢ SRX748426: HCT 116

◢ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX150698: Hep G2

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX702028: hESC HUES64

◢ ERX159250: LoVo

◢ ERX159251: LoVo

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

ORC2
LTB4R
LTB4R2
CIDEB
RGPD2
RGPD1
MAMDC2
RAB17
MIA2
GPR35
ATXN7L1
TACR2
PPIL2
SHISA5
C9orf64
TMEM177
PAOX
ECHS1
LBX2
PCGF1
HNF1A
ACY3
GNAL
PCNX3
MAP3K11
EPN1
LOC100129484
CREB1
LRRC1
SLC35A3
EMILIN2
KIF21A
ETFA
PAK4
MTRNR2L8
AFF1
FGFR3
SKIV2L
NELFE
SUCLA2
LAMTOR5
SELENOP
KLHDC8A
SLCO2B1
DOCK6
DYRK2
TNFSF15
RBKS
BABAM2
HMGCS1
RAMP1
PAAF1
COA4
WT1
GAL3ST2
ECE1
NUMB
GPX4
ASAP2
CCDC90B
CDC14B
MGST2
VIL1
GRTP1
GPR137
BIRC2
TMEM54
CPPED1
SPATS2L
GGT1
CLIP2
EPS8L3
TRAF7
CARHSP1
IST1
MTRNR2L1
SEL1L3
ERVW-1
PRKCSH
CCDC151
MBNL2
INAVA
CDCA3
ARL14
PKP4
CCDC148
SDSL
ABLIM1
MYL12B
RER1
MORN1
ACY1
MTRNR2L2
MSH3
DHFR
TATDN3
NSL1
CPLX2
DUSP18
ANK3
PYDC1
C1QTNF1
INF2
KNL1
IL20RB
GRM4
LTBP1
ZNF827
REG4
DNAJC22
AQP11
MTRNR2L9
GAB2
SCAF11
NRBF2
GOLPH3
FEM1A
OSBP
SPPL2B
LSM7
VCPIP1
C8orf44-SGK3
WDFY2
SEPSECS
HEPH
CRY2
ZNF567
SEC23A
PDGFB
TNFRSF10B
KLHDC2
DEGS2
LURAP1L
PRSS3
TECPR1
ARHGAP27
MMADHC
MYO1A
ARHGEF10L
CACNB2
TYMP
SCO2
POLRMT
NADK2
GSTK1
OSER1
STK24
DENND2B
COL23A1
SPON1
CDKN2AIP
DTX2
SLC7A7
TMBIM1
RIPK4
JMJD1C
WDFY3
ZNF789
ZNF214
NLRP14
ABCC6
TSPAN3
CDHR2
PHACTR4
DENND5B
C1orf74
CDX1
PEMT
MVP
METTL7B
HEXB
TIE1
CYP4F3
ZFYVE27
TREH
DHRS3
MUC13
AHCY
USP2
MAIP1
PIWIL1
ZNF764
SH3BGRL2
NPTN
RPL35
ARPC5L
C2orf88
TNIP2
VTA1
NMBR
IGSF5
TM4SF5
RUNX1
HRH1
C1orf174
ATAT1
SOS1
KIF21B
TNRC18
CAMK2G
PPP4C
OCIAD2
HADHB
HADHA
PDE11A
MRPL40
HIRA
CRYBG2
LASP1
HGD
WDR97
MAF1
TP53I3
KDM6B
ACOX2
CCDC93
CYB5R3
NCOA4
ZNF219
RIN3
PPP5D1
CALM3
TPCN1
ALAS1
AHCYL2
ZC3H12D
MLXIPL
MUC3A
RAB43
LIF
WASF2
IGF2BP3
RHOC
GPBAR1
AAMP
SLC7A5
CA9
ARHGEF39
TMEM45B
PITX3
GBF1
PTPRF
ZNF564
SPAAR
LSM14A
NHSL1
ENTPD2
DECR2
NME4
ZFAND3
TARBP2
MAP3K12
PERP
TJP3
ZSCAN22
ALDH3A2
BCL9L
EIF6
TANK
C1orf210
SDC1
ALPI
DNAJC25-GNG10
DNAJC25
GUCA2A
TSPAN14
IRF2BPL
SCT
CDHR5
WDR7
TTC31
CCDC142
SMAGP
ZFP36
PLEKHG2
ZNF232
USP6
MIOX
ADM2
GRHL3
C15orf40
PGF
ITGA3
NR0B2
ADD3
MRPL11
S100A16
SPO11
NCOA2
CDK3
PICALM
OCIAD1
MYCBPAP
WDPCP
MDH1
PCYT2
NR1D1
CRYBG1
PTK2B
SLC38A10
TRIM35
PDZK1IP1
TREX1
PCGF3
PABPN1
TEP1
PPFIBP2
EFNA1
DTX4
TBXAS1
HIPK2
RPL36AL
MGAT2
SIN3A
MPV17L2
CNNM3
ESRRA
MGAT1
GLYCTK
STX18
BNIP5
CMTM6
TNS3
IL18R1
L3HYPDH
JKAMP
SPATA25
NEURL2
CTSA
PHETA1
NIBAN2
ZBTB40
PHF12
CSTF1
AURKA
ERBB3
PTP4A1
HAAO
CERS2
URGCP-MRPS24
URGCP
SLC9A3R1
NEK2
VTN
SARM1
TMEM169
PECR
SEBOX
PDXP
SEC13
PINK1
MYRF
RAPGEF1
SCRT2
PANK1
NR1I3
CCDC107
NCS1
ZBTB48
MACC1
NDUFS1
EEF1B2
ERBB2
GPR171
SMPDL3A
WDR74
EPS8L2
DEAF1
ACSL5
LENG8
NRL
DCAF11
SLC20A1
CREB3L3
USP18
GCLC
LY75-CD302
LY75
AP1M1
SLC19A3
AGMAT
SH3D19
FUT5
IDH1
LOC100509620
RAB37
NQO2
EDEM1
SMG5
GLMP
PRKCD
VAMP5
HNMT
PRUNE1
MINDY1
PLEKHG6
GUCD1
B4GAT1
IGSF23
RHEX
PPIP5K2
DOCK5
CDR2
SRSF11
LRRC40
AJUBA
F10
WEE1
SIAH2
GAB1
AHSG
CYP17A1
COPS4
PUS10
PEX13
TDP2
MYD88
ACOT13
ACAA1
MMACHC
SFXN3
PDZD7
TRIM15
TRIM10
FBXO31
TIGD3
DIDO1
PDF
FCHO2
APOB
RABGGTB
SDCBP2
GLRX
SPATA2
PLXNB2
GTF2I
RPS3A
XYLB
POLD4
NQO1
CCND2
KIAA2013
CBS
PSMA5
SCARB1
ANKS4B
SLC45A4
BCAR1
AFP
GDI2
C19orf33
LARP1
TRIM48
TCIRG1
MRPL2
KLC4
TK1
AFMID
NDUFA6
EXOC1
KIF1C
INCA1
KRTAP5-7
BLOC1S5
CTDSP1
RGS3
ATP7B
RAB5IF
PTDSS2
ANO9
SMARCD1
CORO1C
IQANK1
FAM83H
CBY3
SMAD3
ADAP1
SNRPA
C19orf54
FYB2
MAN2C1
GJB1
IQGAP2
IL32
NID1
PLEKHB2
PPP1R27
MCRIP1
WNK4
SRMS
APOC3
TBC1D22A
GSDMD
B3GNT3
KDELR2
IFNGR1
GAL3ST1
APOA1
TKFC
DDB1
DBP
NEK4
ITIH1
OXCT2
PTK7
C11orf24
GNG4
ZBED9
MSH5
CLIC1
LRP1
PRDM10
HSPE1-MOB4
HSPE1
HSPD1
TRIM47
CPNE7
FASTKD1
PALM3
ERICH3
SEPTIN9
HINT1
PSPN
ALKBH7
BORCS7
SPG7
MAN1A1
UBR4
RAD50
PEPD
IL1R1
HRCT1
CLASP1
PROCR
PDPK1
CFB
RUVBL1
ATP5F1D
LTV1
SMIM19
SLC20A2
PRAP1
HDGF
H4C3
H1-6
VWCE
TRIM14
AGT
GIP
PRSS8
F7
C1GALT1
UCKL1
ALG11
COL13A1
TECTB
OPA3
CMC1
WDR81
EEFSEC
ENDOD1
C11orf86
NEU4
PLA2G4C
DNMT3A
MBL2
EPHX2
MIA3
LIPK
ZNF184
EGLN1
TADA1
ABCD3
SERINC5
LSM1
BAG4
DMAP1
ANXA9
ZFAND2A
CXCL17
SLC27A5
SH3YL1
ACP1
C2CD2L
TRAF4
C3
INHBE
QPRT
UBA6
PRXL2A
MIDN
KHNYN
CBLN3
HAGH
FAHD1
UBA5
IQCN
AKAP1
TCAF1
DOK4
ADGRG1
GPRC5C
STX16
WDR36
SCN9A
VEGFA
HJV
MTMR11
NCR3LG1
SMYD5
PRMT1
HSD17B11
HCAR3
SEC16B
LPP
CSNK1A1
COMTD1
CRK
MTIF2
ATXN7
ZNF710
ZNF362
TMCO1
POLR2E
BLCAP
SARDH
OTOG
KIF5B
FBXO46
MST1
RAB32
DIP2C-AS1
BRCA1
MYADM
PEX11G
CCL16
PLXNC1
PLXNB1
MTMR4
MMP15
LRP5L
PRR35
PCGF2
DCBLD1
PNOC
FAM20A
LRRC3
SLC2A9
PTTG1IP
CD2BP2
BAIAP2L2
TUBG1
RETREG3
SLC28A1
ABHD12B
GIPC2
TUBG2
SPDYE14
SPDYE10P
RHBG
CIDEC
ZNF512B
AMACR
SERINC2
STARD7
SERTAD2
TLCD2
RBP5
CCR6
PMVK
SHF
CSRNP3
CDKN1A
RASA4
ISOC1
OR5B12
ASL
RBIS
MKKS
SPPL2A
SOD2
CAMKV
PRR3
GNL1
MBLAC1
TAOK3
SUDS3
RARA
PPIAL4C
PPIAL4A
PACSIN3
TBCCD1
POLDIP3
DNAJB11
RCAN1
ANKRD40CL
RBMS1
DLX2
TMEM150A
ZC3H3
PPP1R12B
ACAD11
SLC2A14
NUDCD1
KANK1
SEH1L
SLC47A1
PLK2
DDC
BCL2L1
USH1C
SYNJ2
SECTM1
SCLY
INTS9
HMBOX1
KIAA1522
TACO1
MRPS11
MRPL46
RPS7
PPIAL4H
PCGF5
SLC17A2
TMEM140
FNIP1
PAX2
COBL
ABCC3
KIFC3
MOGAT3
TRPM1
HOXA3
LCAT
ETFB
ABCB6
TMEM127
CIAO1
MSRB1
RENBP
MPI
NEU1
KMT5A
ASGR2
ABR
RASA4B
TMEM89
CEACAM16
MLX
COASY
TOB2
CTSO
PAK1
IL17RE
DNAJB3
SMLR1
ATXN2
FZD5
SRC
CFL1
ARNT
RPL34
HPCAL1
ROMO1
ODC1
PPIAL4G
AGPAT3
SCP2
PHF14
COMT
POLR2H
CLCN2
STAP2
MPND
KDM2A
DCDC2
IQSEC1
IYD
ANKRD39
LSM14B
IL17RB
CHDH
TAF4
LAPTM4A
ITPKC
COQ8B
ZNF302
OTULIN
C5
ENTPD8
RHOQ
ATP6V1E2
PPIAL4F
PPIAL4E
PPIAL4D
ZNF839
SFRP5
KRT8
CAPN2
CSRNP1
SORBS2
CPNE6
AHDC1
VPS54
MOV10L1
SEPTIN4
GNA11
LTBP4
USP37
CNOT9
UGDH
UGT1A1
CHMP4B
INTS4
GALT
CDC42BPA
GPT
SLC35D1
C6orf47
C2orf42
DRG2
PLEC
LOC102724265
FEM1C
PCDH1
ADRA1D
CPHXL
HNF4A
MAP4K5
ATL1
NET1
LCE2D
SLC39A5
GDF15
AMDHD2
APOA4
SLC9B2
ORM2
GALM
CDK5RAP3
APOE
CNOT1
PGLYRP2
TJAP1
PACSIN2
EIF4G3
PGPEP1
MRPL20
ZFAND2B
SLC41A2
ZMYND8
ADI1
PIK3R2
RNF126
ATG16L1
ANXA2
ZDHHC19
SLC51A
ST3GAL6
C1QTNF6
CPT1A
CDIP1
PUSL1
ACAP3
VPS28
FETUB
CLDN4
C16orf70
NIPSNAP1
GALK1
MTFMT
CASTOR2
SLC12A9
EPHB4
CD86
ZNF444
TOGARAM1
KLHL28
GPHA2
ETV4
NRCAM
GAMT
NAPEPLD
APBA2
SPTBN1
ZSWIM3
ACOT8
GMNN
EHHADH
CAMSAP3
CHST13
C4BPB
LOXHD1
APOA2
OR9Q2
ACSF2
KPNA7
GRB7
PLTP
CRYGC
PLG
CEP68
SH3D21
RNASE4
ANG
SOAT2
TNXB
RIPK3
PJA2
NFATC2
MAP3K14
NODAL
GATA3
ZNF747
CCDC146
CAPN11
SBF2
NRSN2
CMPK1
FABP1
CLDN14
UMPS
PPP1R9B
SMARCD2
MYO18A
HMOX1
RFPL2
STARD4
GSN
BCAM
C2CD2
OVOL1
GNAT1
TMEM181
U2SURP
TLCD4-RWDD3
TLCD4
ATP5MC3
PRM1
CCL20
PDLIM2
CCDC200
PIKFYVE
DDX19B
MPV17L
RCL1
ZNF696
MRGPRF
PIEZO1
YARS1
S100PBP
SOCS5
LIN54
MINPP1
PKLR
WFDC3
DNTTIP1
CHD9
SNTB2
DHX34
PPP1R37
KIDINS220
AGRN
RNPEP
CREBRF
CITED2
RAB11FIP4
PGAP3
SLC29A3
SELENOI
C2
ADGRF3
ROCK2
TMEM139
CASP2
CLPB
TMEM254
NGEF
RPS24
POLR3A
TST
MPST
RASSF5
RAP1GAP
AP1B1
MOGAT2
METTL8
DCAF17
MFN2
C3orf20
UTRN
TMEM256
TECR
NLGN2
DNAJB1
C5orf15
SENP1
PFKM
NUFIP1
GPALPP1