ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX361882 | LoVo
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◢ SRX748420: HCT 116

◢ SRX748425: HCT 116

◢ SRX748426: HCT 116

◢ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX150698: Hep G2

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX702028: hESC HUES64

◢ ERX159250: LoVo

◢ ERX159251: LoVo

◣ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

TMEM177
PAOX
ECHS1
PPIL2
ORC2
MAMDC2
SLC35A3
KIF21A
ATXN7L1
HNF1A
ERBB3
MIA2
SLC7A7
GSTK1
GPR35
OR9Q2
RAMP1
AFF1
SELENOP
ETFA
TACR2
LURAP1L
CDC14B
PRKCSH
CCDC151
ZFAND3
INAVA
CCDC90B
PRSS3
TMEM45B
HMGCS1
CLIP2
LTB4R
LTB4R2
CIDEB
YEATS4
RASA4
SKIV2L
NELFE
IST1
NADK2
STK24
MAIP1
MYRF
DNAJC22
SHISA5
PCNX3
MAP3K11
GCHFR
KNL1
DENND5B
RBKS
BABAM2
PHACTR4
DNAJC25-GNG10
DNAJC25
TSPAN3
LBX2
PCGF1
AQP11
VIL1
SMAGP
NPTN
DYRK2
MYO1A
MYL12B
TATDN3
NSL1
ZNF384
LOC100129484
RAB17
BIRC2
TTC31
CCDC142
C9orf64
SPPL2B
LSM7
PAK4
GAB2
RAB43
RASA4B
ADAP1
MAN2C1
MNAT1
LTV1
MARK2
CNNM3
ACY1
SPON1
MAGI3
ZNF564
LAMTOR5
LRRC1
GGT1
TCAF1
ACY3
BNIP5
PHETA1
TNIP2
PTPA
CRAT
OSBP
EIF6
TMCO1
CLRN3
KIAA0100
SLCO2B1
CPPED1
TNS3
METTL7B
COL23A1
TYMP
SCO2
MMACHC
REG4
ATXN2
RAD54L
OR4N4
BAIAP2L2
POLRMT
SPATA25
NEURL2
CTSA
AGMAT
WDR97
MAF1
KDM6B
DOCK6
CYB5R3
CACNB2
TECR
DNAJB1
GOLPH3
RAB37
PAAF1
COA4
CDK5RAP3
TPCN1
SEC16B
ARMH3
HOXA3
KLHDC8A
LRIG3
WDFY2
COBL
HEPH
ARHGAP27
B4GAT1
LTBP1
ZNF827
C1GALT1
METTL8
DCAF17
LINS1
ASB7
GIPC2
PAK1
BTNL8
MAP4K5
ATL1
DMXL2
C1QTNF1
FNIP1
LARP1
EPS8L3
ASAP2
C1orf210
CRYBG2
PCDH1
CDC34
SLC17A5
CLDN7
BCL3
PTGDR2
KRTAP5-7
RUNX1
MBNL2
PERP
ZNF408
ARHGAP1
ZNF219
TMEM253
SUPT7L
SLC4A1AP
RAPGEF1
ABLIM1
PLEKHG5
CDK3
THBS4
MTX3
MPV17L2
NCR3LG1
COQ5
LSM5
XPR1
PPIP5K1
CKMT1B
NUDCD1
HNF4A
GRTP1
ADD3
TFDP2
TNFSF15
TSEN2
PPP4C
TANK
ISCA1
PEX16
LARGE2
C3orf85
CDKN2AIP
UBC
LMO7
C1orf174
ABCB1
HSD17B11
TSPAN14
TP53I3
NUMB
FOXJ3
PROCR
CAMK2G
PDZK1IP1
PTK2B
TRIM35
NDUFA6
CLDN4
LRP6
SOS1
SPATS2L
DTX2
KDM3A
SRSF11
LRRC40
L3HYPDH
JKAMP
IL20RB
C2orf88
RHOC
TRIM15
TRIM10
MTRNR2L2
MSH3
DHFR
RSBN1L
XPC
LSM3
CTXN3
RPL35
ARPC5L
MLEC
HSPE1-MOB4
HSPE1
HSPD1
PEX11G
MYO7B
GOLM2
KLHDC2
FGFR3
PDGFB
TMIGD1
NR1D1
CD2BP2
PRUNE1
MINDY1
SCARB1
TMEM89
SENP1
PFKM
PKP2
UHRF1BP1L
EPS8
KRT15
PINK1
IGF2BP2
CENPS-CORT
CENPS
TCF12
MGST2
IDH1
IGF2BP3
VTA1
NMBR
ANKRD40CL
PTBP1
CHST13
PDXP
IGSF23
AJUBA
ZNF764
CSNK1A1
SASH1
TMEM54
TNPO3
CALM2
PKP4
CCDC148
ANK3
PHF7
BAP1
SEMA3C
GAL3ST1
OPA3
SMYD5
CREB1
MRPL40
HIRA
TPRG1L
HADHB
HADHA
HGD
PICALM
MIIP
TMBIM1
ZFP36
PLEKHG2
HAUS4
TIA1
ZDHHC3
EXOSC7
DGKZ
PSMA5
TM4SF5
SDHAF1
TPD52
TTI1
RPRD1B
NAPRT
TMPRSS4
TNRC18
MEGF9
CDR2
GNAL
DOLPP1
ASB4
SLC16A14
PGF
WT1
RSPRY1
PSME3IP1
MMADHC
PIWIL1
ARL14
TSHZ1
GTF2IRD2
SFRP4
EPDR1
RBIS
VANGL1
SPRY2
NDUFS1
EEF1B2
NAPEPLD
TRIM48
ABR
DTX4
ENGASE
ZNF687
TCAF2
PEPD
CCDC200
USF3
PEF1
PROS1
SECISBP2
PFDN5
MYG1
PPP5D1
CALM3
AHCY
TINAGL1
TES
SDSL
MGAT5
ATP5IF1
YAE1
POLD4
TJP3
NHSL1
UBA5
TMEM150A
ACAD11
FEM1A
TMEM143
SYNGR4
MPP5
URGCP-MRPS24
URGCP
ZNF214
NLRP14
C4BPB
SEC23A
OCIAD2
AMN
SEPSECS
CRPPA
CSTF1
AURKA
CDCA3
NPNT
GRB7
METTL25
CCDC59
PPM1D
PDE8A
HDAC7
SPTBN2
RAD51AP1
C12orf4
ZNF775
TLE3
VPS41
PTP4A1
SLC35D1
PITX3
GBF1
PITPNM3
EIF2AK2
CARHSP1
SDC1
GDPGP1
CIB1
JPH2
RIPK4
CLASP1
CLIC5
BRICD5
SUCLA2
SSTR1
CPNE8
SEL1L3
PLAAT3
ERF
FITM2
NEK2
ZNF747
AK3
PYM1
DGKA
BCL9L
RBM33
RPS26
LRP2
FOXL3
PRKCD
MDM2
DOCK5
NADK
ECM2
MUC13
SMPDL3A
CDHR2
NFIB
GLI4
GABPB1
HSD17B2
PCYT2
CCND2
SIN3A
TMEM181
SUOX
SNRNP35
OR10H5
RAPGEF2
EFNA1
CCDC93
ZFYVE27
GUCA2A
SOX30
C5orf52
RRN3
CCDC42
UBE3B
KCTD10
STARD4
CEP43
SLC11A2
TOMM5
ZC3H12D
AXL
CCNI
LAMA3
MYD88
ACAA1
AMACR
GAS6
SELENON
INSIG2
TNFAIP8L1
KDSR
GSAP
PRR3
GNL1
UBE2R2
ACADM
TRIM2
GSTM4
GGCX
ZFAND6
LGALS4
C1orf74
MRPL24
DUSP18
CKMT1A
RSAD1
RHEX
ODC1
PYGL
KATNB1
NCOA2
APOL4
RIN3
FAM102A
TMIGD3
ADORA3
HOXA7
HOXA6
LRIG2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
PHF12
GPX4
TMEM63A
RNF43
UGT1A1
KIAA1549L
PDE5A
SLC7A5
IFNGR1
NR1H3
ACP2
GUCY2C
ZNF195
C15orf40
ABCC6
NIPAL1
CNGA1
MRPL34
DDA1
ANKRD29
KDELR2
MGAT1
FOXQ1
PMM1
DDAH1
ATF4
BRI3BP
DHRS3
CHMP4B
WFIKKN1
LEXM
TARBP2
MAP3K12
METTL26
NYAP1
OVOL1
TRIM31
CPLX2
LIPK
JMJD1C
VILL
C19orf33
ZNF232
USP6
CDX1
NT5DC1
RPL36AL
MGAT2
TIMP4
PXN
LASP1
ZSWIM3
ACOT8
RAB5A
EFHB
IQGAP3
EFNA2
RAB24
PRELID1
GTF2IRD2B
SH3BGRL3
SLC20A1
DDC
ITGB3BP
EFCAB7
NRP1
CGN
TNFSF4
EMX1
CTTNBP2NL
MRGBP
GAB1
S100A16
RARA
PUSL1
ACAP3
LSM14A
HLA-A
LEKR1
SH2D3A
ZBTB48
STARD7
CCDC71
RELL1
LZTS3
KLHDC8B
PYROXD1
ABAT
CBWD5
CBWD3
HRH1
RASSF9
ZNF789
TOB2
SLC25A16
PRKCA
MS4A8
FRG2
PRDM10
DUX4
SNX7
CD177
AP1M1
PPP1R27
MCRIP1
C6orf132
CEP170B
MACC1
TLCD2
RREB1
EML6
VAC14
UAP1
PALB2
DCTN5
EXD2
SYT17
RARRES1
CLCN3
PANK1
DENND2B
OTOG
USH1C
KIF21B
STX18
SPO11
RFLNA
GTF2H4
ABCB4
SUSD1
TNFRSF14
B3GNT3
ALDH3B1
ZBED4
SLC30A10
BCL7B
SH3D19
PPIP5K2
CORO1C
UBA6
HAGH
FAHD1
ZNF57
LSM2
MRPL11
CERKL
CDC14A
OSGIN1
OBI1
HABP2
TACC1
PPFIBP2
RAB6D
FRMD3
NDRG1
OCIAD1
GPR68
REXO4
ADAMTS13
SPATA5
NUDT6
MUC3A
CRY2
UFL1
MTF2
NEIL1
CEACAM16
CYCS
ETFDH
C4orf46
PDE11A
PSPN
ALKBH7
COL13A1
CXCL17
AKAP1
SRC
B4GALT4
GBA
CYP2C8
DECR2
RDH5
BLOC1S1
NME4
NRBF2
SLC25A45
FRMD8
PRLR
SAXO2
EFL1
TAX1BP1
RSPH1
SART3
ISCU
H4C9
SFXN3
PDZD7
SPAAR
ESRRA
TYMSOS
TYMS
MYO1E
ZZEF1
CYB5D2
HDGF
C1orf105
ODF3B
MTCH2
CNBP
CTSO
CHD9
BAZ1B
MAP1LC3B2
KCNK10
FBXO22
SMARCD1
OTULIN
NUB1
MAT2A
MVP
CA9
ARHGEF39
ATP5MC3
RER1
MORN1
SLC24A1
OR6B1
MPRIP
XYLB
IRF2BPL
KRT8
SLC38A10
NOTCH2
NMNAT1
LZIC
PANK2
ANTXR2
TSPAN8
GAMT
MRPS30
RRP9
PARP3
UGDH
PJA2
SCGB1D2
HMCES
CREB3L3
SNRPA
C19orf54
PGPEP1
HMOX1
RAD18
PARP4
CTNNB1
STAT6
OSBPL3
ASB8
ZC3H12A
CBY3
DIP2C-AS1
CREBRF
SMG7
SHFL
RAB40C
LHB
PLCB3
SH3BGRL2
PAFAH2
NBL1
CMC1
ZNF362
ASL
KDM2A
IYD
PCBP1
TEX9
RFX7
RIN2
RGL1
ARPC5
PXMP2
POLE
SERF2
ELL3
PHGR1
CYP1A1
WNT5B
MIA3
SLC9A3R1
WNK4
KIAA1522
GANAB
MTUS1
H4C7
H4C6
PMVK
CDKN1A
FAM185A
TAF9
RAD17
HES1
AK6
USP36
RIC8B
NAB2
MTLN
TMEM140
RCOR2
CXCL2
MRPL48
SELENOT
LENG8
SLC41A2
TOE1
MUTYH
ATP5MF-PTCD1
ATP5MF
PEX3
ADAT2
TPM1
IL1R1
MEP1A
GATAD2A
ANXA2
NEK11
ASTE1
BTN3A2
PRDM8
USP2
BORCS7
TRAF4
CYP4F3
POM121
SCAF4
BAZ2A
TBXAS1
HIPK2
NUAK2
NLRP6
DEPTOR
INF2
GAL3ST2
AGPAT3
NT5C3A
TTC38
PKDREJ
B2M
LHX4
SAMD3
SCAF11
SLC22A3
WDFY3
NAB1
ELK4
USP8
TEX2
CORO1A
TGFA
KIF1C
INCA1
POLDIP3
SOCS5
SEMA3B
LDAH
HNRNPF
COG7
AGBL4
CLDN3
CRYBG1
PEX10
TMEM62
MIOX
ADM2
TBC1D30
GNS
GSTT1
SCRT2
EXOC1
RAB5IF
TREH
SLC22A2
SCT
CDHR5
GGNBP2
SEC22B
XAGE1B
XAGE1A
ACOX2
KHNYN
CBLN3
THNSL1
WDPCP
MDH1
SMIM14
VDR
FAM200B
HDHD5
ENDOD1
ADGRG1
SLC16A4
TLNRD1
SURF4
VPS50
HEPACAM2
CDK18
GAS2L3
GALM
GOLGA4
SMARCE1
GPRC5A
TOLLIP
TDP2
ACOT13
RPEL1
KCTD7
PRR15L
SMIM31
MIEF1
KMT2D
TGM3
PIGR
CTDSPL2
DOK4
WDR90
TUBB4B
HNRNPD
TAOK3
SUDS3
SPRY4
PDZD9
PRR5
LRP4
MRPL4
CTNNBIP1
RALA
PRRC1
VPS28
CDH11
SPPL3
GCLC
SMAD3
ZNF516
SYT12
PLEKHG1
IL18R1
FCAMR
CACHD1
ATP6V1FNB
ATP6V1F
SHF
GALK1
IRF2
TRAF7
SERINC5
MICAL2
LGALS3
STX19
NR1I2
KBTBD8
HTR1F
SEPTIN11
PAX2
CCDC107
HMGA2
WDR81
SH3BP5L
GSDMB
ABTB2
IQCN
P2RY2
SIAH2
ARHGEF18
ISOC1
FTCDNL1
CD99
CBWD6
PLXDC1
LSM4
ZNF3