ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX748425 | HCT 116
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◢ SRX748420: HCT 116

◣ SRX748425: HCT 116

◢ SRX748426: HCT 116

◢ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX150698: Hep G2

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX702028: hESC HUES64

◢ ERX159250: LoVo

◢ ERX159251: LoVo

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

KDM6B
SCRT2
MAMDC2
MIA2
CRYBG2
NDUFS1
EEF1B2
PHF12
SKIV2L
NELFE
PPIP5K2
CSTF1
AURKA
URGCP-MRPS24
URGCP
CCDC107
RBKS
BABAM2
DNAJC25-GNG10
DNAJC25
C11orf49
SCAF11
WDR74
SFRP5
NEK2
CCDC90B
ACSL5
LSM1
BAG4
SLC7A5
MTRNR2L2
MSH3
DHFR
MTRNR2L1
MTRNR2L8
WDR36
ATXN7L1
ZFP36
PLEKHG2
RTBDN
MAST1
SLC9A3R1
POLDIP3
CD2BP2
LOC100509620
KNL1
PLEC
RGPD2
RGPD1
CDC14B
U2SURP
RPS3A
RABGGTB
NR1I3
ZNF764
SNRPA
C19orf54
EXOC1
MTFMT
DBP
KIAA2013
CEP152
LASP1
IST1
ZSWIM3
ACOT8
IDH1
YARS1
S100PBP
COL23A1
EIF1AD
BANF1
GFI1B
TSC1
SEPTIN4
FHL2
RPS7
SH3D19
RPL27
RAB17
CD86
MRPL11
EPS15
INAVA
SPON1
FBXW5
C8G
PCBP1
PRKCD
PRR3
GNL1
PLK2
POLRMT
ACY1
KIF21B
SYT7
PCNX3
MAP3K11
METTL7B
CCDC200
SNRPF
SPAAR
HRCT1
ABHD12B
DSTYK
LENG8
C1orf174
SASH1
PIKFYVE
CCND2
TAOK3
SUDS3
TRIM2
ZC3H10
RPL41
C1QTNF1
SIAH2
UROS
BCCIP
COQ5
ZNF383
NCS1
EPS8L2
DEAF1
PPP1R37
GOLGA4
ABCC3
CLCF1
ABLIM1
OCIAD2
FAM98B
TBCCD1
DNAJB11
LARP1
ERICH3
SAMD1
PTP4A1
FCHO2
HDGF
LIPK
RBM27
MAN2C1
ZBED9
ZNF564
B3GNT3
LTB4R
LTB4R2
CIDEB
BORCS7
OGT
MYRF
FBXO46
MRPS28
KREMEN2
USP37
CNOT9
PDAP1
BUD31
ZNF219
TRIM48
SNX16
PRKCSH
CCDC151
HNRNPH1
OXCT2
GUCA2A
ARPIN-AP3S2
ARPIN
MRPS30
SPATA25
NEURL2
CTSA
ATP5MC3
SH3D21
GOLGA8B
LBX2
KCNC3
HAO1
STAT3
ADGRA2
INTS12
GSTCD
PTPRF
PRAP1
KMT5A
ZKSCAN2
PIM3
MSL1
RAD50
MEAK7
CHD1
CREB3L3
TNFRSF10B
C11orf86
LOC730098
CCL27
TJP3
KPNA7
PAFAH2
FRG2C
KCNMB4
GPX4
SPDYE14
SPDYE10P
CASTOR2
RPL12
LRSAM1
SNRPB
FRG2
PDPK1
NUDCD1
SMARCD2
RAB11A
TMEM181
SHISA5
LSM5
RAPGEF1
ARNT
SEC23A
TRIP12
FBXO36
KRTAP5-7
ATXN2
DUX4
SSTR5
ANXA11
ZNF747
RPL23A
RAB34
KLF6
GFM1
MMP15
RBIS
GDF15
KLRC3
ALG10B
EPB41L4B
RPGRIP1L
FTO
FNDC11
CCNI
PAQR4
PPP1R13L
POLR1G
MKRN3
GAL3ST1
MIA3
LOXHD1
USP2
RPL34
AHSP
ALG10
PSMA5
CMC1
RCAN1
COBL
ADPRHL1
GJB1
SELENOP
CD9
PYY
NAGS
KDM5A
CCDC77
BAZ1B
RAD51AP1
C12orf4
RFX2
CENPN
ERBB3
TRIM15
TRIM10
DENND5B
GALK2
COPS2
CLASP1
SH3BP5L
SLC27A5
WDR90
BBC3
H4C3
H1-6
SNTB2
TMEM143
SYNGR4
CCNL1
LHB
CALM2
MVP
EPS8L3
BIRC2
TTI1
RPRD1B
USP16
IGSF23
TDP2
ACOT13
ATF7-NPFF
ATF7
METTL25
CCDC59
TARS2
PEMT
TOB2
NR6A1
RIPK4
TATDN3
NSL1
GCLC
LRP1
AAR2
MYC
ORC2
GAB1
SERINC5
PLA2G2E
LPIN1
PHF14
PPP5D1
CALM3
PABPN1
TPD52
CIBAR2
CHST11
NFXL1
PPP6R1
FUT5
IQCN
C6orf47
GPANK1
CSNK2B
ASF1B
NUP62
IL4I1
ATF5
RHOC
MUC3A
HERC5
PRRG2
NOSIP
RGS3
ETV4
HYAL2
SMIM29
PDE4C
PAX2
EPS8
TMEM169
PECR
IL20RB
RBBP5
RPS29
PRMT1
PJA2
SLCO2B1
MBD3
IER5L
H4C11
SRSF11
LRRC40
H1-0
GCAT
MTFR2
VPS25
ISCA1
HEXIM1
ZBTB48
LAMTOR5
RAB11B
NUCKS1
ZNF165
MRPL34
DDA1
EIF4A2
PPP1R12B
IKZF3
SLC41A2
LAPTM4A
PLXNB2
KATNB1
RPS6KA1
NQO2
GPR137
TINAGL1
PLXDC1
SAXO2
EFL1
ZNF526
AFF1
ITGA3
PHC2
MYL12B
MAP4K5
ATL1
NUF2
MRPL30
MITD1
NFATC4
KLRC2
BANP
SMG7
LGALS1
ATF4
GRPEL2
INTS4
FIBP
CCDC85B
PYCARD
PARP2
CAMK2G
PDE11A
RARA
VPS54
RAB11FIP4
NDRG1
GMEB2
SMAD3
C2CD2L
C2CD2
PIPOX
KDM3A
ZC3H12D
PTDSS2
ANO9
PRDM10
APBA2
ZNF335
UBE2R2
MTMR11
NUP107
NEDD4L
TBP
PSMB1
NR2E1
FBRS
POLG
OPA3
SHF
MPI
C1QTNF6
PSD
FBXL15
KIF16B
CENPP
NOL8
LAMP3
MMADHC
NR2F1
NCSTN
COPA
BORCS6
RMND1
ARMT1
PITX3
GBF1
ARHGAP32
NR1D1
TRUB2
COQ4
GBA
TRIP10
GPR108
C19orf33
MBLAC1
PTPN6
C12orf57
S100A16
TTI2
TMEM101
SGO1
STK35
GCHFR
NME1
B4GALT4
PPP1R9B
TIAL1
GNAL
ZDHHC6
VTI1A
PAOX
PKP4
CCDC148
VIL1
HAAO
CERS2
HNF1A
CNNM3
VTN
SARM1
SEBOX
LRRC1
PDXP
SEC13
PINK1
TACR2
NUMB
PANK1
SLC7A7
PCYT2
DOCK6
MACC1
ERBB2
KIF21A
GPR171
CDK3
SMPDL3A
HADHB
HADHA
CLIP2
ACOX2
ARHGAP27
PHETA1
ZNF567
GGT1
NRL
DCAF11
GPR35
SLC20A1
AHCY
CPLX2
USP18
FGFR3
MGST2
LY75-CD302
LY75
AP1M1
SLC19A3
AGMAT
DNAJC22
CARHSP1
ACY3
RAB37
EDEM1
SMG5
GLMP
VAMP5
HNMT
PRUNE1
MINDY1
PLEKHG6
GUCD1
DENND2B
B4GAT1
ABCC6
NCOA4
PCGF1
DHRS3
RHEX
DOCK5
CDR2
AJUBA
F10
WEE1
C2orf88
AHSG
CYP17A1
COPS4
PUS10
PEX13
CDHR2
MYD88
ACAA1
MMACHC
IGF2BP3
SFXN3
PDZD7
NR0B2
FBXO31
PPIL2
TIGD3
DIDO1
PDF
AQP11
APOB
TTC31
SUCLA2
SDCBP2
GLRX
SPATA2
TMEM177
GTF2I
TRAF7
XYLB
POLD4
NQO1
LOC100129484
CA9
ARHGEF39
CBS
SCARB1
ANKS4B
SLC45A4
BCAR1
AFP
GDI2
TCIRG1
LURAP1L
MRPL2
KLC4
TK1
AFMID
NDUFA6
KIF1C
INCA1
BLOC1S5
CTDSP1
EIF6
ATP7B
RAB5IF
KLHDC2
CCDC142
ZNF827
SMARCD1
PERP
CORO1C
MLXIPL
TMBIM1
IQANK1
FAM83H
CBY3
ADAP1
HGD
FYB2
IQGAP2
IL32
NID1
CYB5R3
ZNF232
USP6
PLEKHB2
PPP1R27
MCRIP1
WNK4
SRMS
APOC3
TBC1D22A
GSDMD
KDELR2
IFNGR1
SOS1
APOA1
TKFC
DDB1
NIBAN2
NEK4
ITIH1
PTK7
MGAT1
C11orf24
GNG4
MBNL2
RAB43
MSH5
CLIC1
HSPE1-MOB4
HSPE1
HSPD1
TRIM47
CPNE7
FASTKD1
PALM3
CPPED1
SEPTIN9
HINT1
PSPN
ALKBH7
SPG7
MAN1A1
UBR4
SPPL2B
LSM7
PEPD
IL1R1
PROCR
PHACTR4
CFB
PPP4C
RUVBL1
C9orf64
IRF2BPL
ATP5F1D
LTV1
SMIM19
SLC20A2
CDKN2AIP
VWCE
TRIM14
AGT
GIP
PRSS8
F7
C1GALT1
UCKL1
ALG11
COL13A1
TECTB
TNFSF15
NHSL1
WDR81
EEFSEC
ENDOD1
SMAGP
NEU4
PLA2G4C
DNMT3A
MBL2
EPHX2
ZNF184
EGLN1
TADA1
ABCD3
DMAP1
ANXA9
ZFAND2A
CXCL17
SH3YL1
ACP1
SH3BGRL2
TRAF4
C3
INHBE
QPRT
UBA6
PRXL2A
MIDN
KHNYN
CBLN3
HAGH
FAHD1
UBA5
AKAP1
TM4SF5
PAK4
TCAF1
DOK4
ADGRG1
GPRC5C
STX16
SCN9A
VEGFA
HJV
NCR3LG1
SMYD5
HSD17B11
HCAR3
BCL9L
SIN3A
SEC16B
LPP
CSNK1A1
COMTD1
GLYCTK
CRK
MTIF2
ATXN7
ZNF710
ZNF362
TMCO1
POLR2E
BLCAP
SARDH
OTOG
KIF5B
STK24
RAMP1
OSBP
MST1
HEXB
RAB32
DIP2C-AS1
BRCA1
MYADM
PEX11G
CCL16
PLXNC1
PLXNB1
MTMR4
PDGFB
LRP5L
HMGCS1
EFNA1
PRR35
PCGF2
DCBLD1
PNOC
FAM20A
LRRC3
SLC2A9
PTTG1IP
ZFAND3
BAIAP2L2
TUBG1
RETREG3
SLC28A1
GIPC2
TUBG2
RHBG
CIDEC
ZNF512B
AMACR
SERINC2
STARD7
SERTAD2
SPATS2L
TLCD2
RBP5
CCR6
PMVK
CSRNP3
VTA1
NMBR
CDKN1A
RASA4
SLC35A3
ISOC1
OR5B12
ASL
MKKS
JMJD1C
SPPL2A
MTRNR2L9
SOD2
CAMKV
PPIAL4C
PPIAL4A
PACSIN3
ANKRD40CL
RBMS1
PRSS3
DLX2
PAAF1
COA4
TMEM150A
ZC3H3
PICALM
ACAD11
SLC2A14
TANK
KANK1
SEH1L
SLC47A1
DDC
BCL2L1
USH1C
INF2
SYNJ2
SECTM1
PGF
SCLY
INTS9
HMBOX1
KIAA1522
TACO1
MRPS11
MRPL46
CACNB2
PPIAL4H
PCGF5
SLC17A2
TMEM140
FNIP1
KIFC3
MOGAT3
TRPM1
HOXA3
ZNF214
TMEM45B
NLRP14
LCAT
ETFB
ABCB6
TMEM127
CIAO1
MYO1A
MSRB1
RENBP
NEU1
CYP4F3
ASGR2
ABR
RASA4B
TMEM89
CEACAM16
MLX
COASY
CTSO
PAK1
IL17RE
DNAJB3
SMLR1
FZD5
SRC
CFL1
HPCAL1
ROMO1
ODC1
PPIAL4G
ALDH3A2
AGPAT3
WT1
SCP2
COMT
POLR2H
CLCN2
STAP2
MPND
KDM2A
DCDC2
IQSEC1
IYD
ANKRD39
LSM14B
IL17RB
CHDH
TAF4
ITPKC
COQ8B
ASAP2
ZNF302
OTULIN
C5
ENTPD8
RHOQ
ATP6V1E2
PPIAL4F
PPIAL4E
PPIAL4D
ZNF839
KRT8
CAPN2
CSRNP1
SORBS2
CPNE6
AHDC1
MOV10L1
GNA11
LTBP4
ETFA
UGDH
UGT1A1
CHMP4B
GALT
CDC42BPA
GPT
SLC35D1
C2orf42
DRG2
GPBAR1
LOC102724265
FEM1C
PCDH1
ADRA1D
CPHXL
HNF4A
CCDC93
NET1
LCE2D
SLC39A5
C1orf210
AMDHD2
APOA4
SLC9B2
CREB1
ORM2
GALM
CDK5RAP3
ZFYVE27
ENTPD2
APOE
CNOT1
PGLYRP2
TSPAN3
TJAP1
PACSIN2
EIF4G3
REG4
PGPEP1
MRPL20
ZFAND2B
ZMYND8
ADI1
PIK3R2
RNF126
ANK3
ATG16L1
ANXA2
ZDHHC19
SLC51A
ST3GAL6
CPT1A
CDIP1
PUSL1
ACAP3
VPS28
FETUB
CLDN4
C16orf70
AAMP
NIPSNAP1
GALK1