ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX026267 | Caco-2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◣ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◢ SRX748420: HCT 116

◢ SRX748425: HCT 116

◢ SRX748426: HCT 116

◢ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX150698: Hep G2

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX702028: hESC HUES64

◢ ERX159250: LoVo

◢ ERX159251: LoVo

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

PHF12
CSTF1
AURKA
MYRF
SLCO2B1
MIA2
SLC7A7
DBP
PAOX
SPON1
BTNL8
SELENOP
HNF1A
PKP4
CCDC148
PPP5D1
CALM3
B4GAT1
LRRC1
RPS7
SMPDL3A
PTP4A1
KIF21A
KDELR2
VIL1
CNNM3
PCYT2
PLEKHG6
ADAP1
NODAL
LASP1
RPS3A
ACY3
SHISA5
CACNB2
STARD4
COMTD1
CERS2
INAVA
APOC3
ZFP36
PLEKHG2
VRTN
GPR171
AHCY
RAPGEF1
GPX4
WDR36
LENG8
ERBB3
TATDN3
NSL1
ACOX2
IL20RB
SMARCD1
IGSF23
ACOT7
ADGRG7
CAMK2G
ZNF488
CCND2
MVP
CRYBG2
SEH1L
SLC51B
ZNF567
DENND2B
SIN3A
F7
GTF2I
PLXNC1
FBXO31
CLIP2
GATA3
PANK1
MRPL44
STX16
IL17RE
CDK5RAP1
LBX2
MACC1
RBKS
BABAM2
LOC100129484
PAK1
ORC2
RAB11FIP4
CAMKV
HAAO
TACR2
TNFSF15
JMJD1C
KCNE3
SDHAF1
EIF6
RAB5IF
DIDO1
PINK1
CDR2
CREB3L3
SLC39A14
VAMP5
AMACR
PRKCD
WEE1
POLDIP3
PGF
DIP2C-AS1
PTBP3
HINT1
FGFR3
KNL1
LY75-CD302
LY75
VTN
SARM1
LTB4R
LTB4R2
CIDEB
NEK2
GGT1
SPDYE14
SPDYE10P
ZNF214
NLRP14
RAD52
TANK
C11orf49
EHBP1
GSDMB
SCAF11
GNA11
ANKRD40CL
F10
WDR74
HMOX1
BRCA1
IGF2BP3
TCEA2
CPLX2
ABLIM1
METTL15
KIF18A
DGAT1
METTL24
PRUNE1
MINDY1
EPHX2
PACSIN3
ACY1
PLEC
TACO1
CWC25
CLPB
SPPL2B
LSM7
SEBOX
TMBIM1
MYADM
LGALS2
MGST2
CGN
PPP1R27
MCRIP1
RAB17
ZNF827
BORCS7
APOB
NRCAM
PARD3B
SH3D19
KHNYN
CBLN3
MMADHC
CYP17A1
PHF14
SUCLA2
SLC45A4
TNFAIP1
IFT20
NCOA4
APOA1
CORO2A
CEACAM18
TMEM169
PECR
USP2
NDUFS1
EEF1B2
PAX2
CORO1C
HGD
PDZK1
SMAD3
LSM14A
SPRYD7
SELENOI
ADGRF3
COX16
LRRC29
VAC14
DNAJC25-GNG10
DNAJC25
AFF1
PICALM
ZBTB48
DTX2
AMBP
PLXNB2
KMT2D
KDM6B
PRAP1
CNTN4
RIPK4
EIF1AD
BANF1
SLC9A3R1
EDEM1
CASTOR2
SSTR1
SLC6A19
AP2S1
ABCC10
ZNF529
ORM2
FOS
RNASE4
ANG
CARHSP1
TMEM181
GNAL
BLOC1S5
C2orf88
TSPAN3
ATOX1
NUDT13
TSPAN32
C11orf21
DHRS3
LTBP4
RBM42
PABPN1
RAB37
MRPL16
CCDC90B
PPIP5K2
PDZK1IP1
SLC7A5
PRDM10
CEACAM16
GALNT16
DMAP1
NT5C3A
VDR
CDC14B
CCDC107
COL13A1
TECTB
MYL12B
TECR
DNAJB1
IYD
U2SURP
MRPL48
TRIM48
MGAT1
NEK4
ITIH1
CPHXL
KMT5A
CARD16
PDZRN3
SMG5
GLMP
PTDSS2
ANO9
DTX4
SPA17
SIAE
SPATA2
DCBLD1
CALML3
NUMB
NHSL1
STK24
CAMSAP3
CNOT2
CD244
NDUFS7
ERBB2
KDM2A
LOC102724265
TMEM115
TRIP4
MAPKAPK5
NAPEPLD
RBBP5
CBFB
CLN6
C19orf33
NPAS4
IQANK1
FAM83H
PEPD
SMAGP
STARD7
CCR6
FZD5
ST3GAL6
MYH14
IPMK
CISD1
SNRPA
C19orf54
ANK3
NUGGC
ELP3
RAG2
IFTAP
ACSL5
PROCR
GSTK1
SKIV2L
NELFE
DOCK6
KIF1C
INCA1
TJP3
NRXN2
REEP6
PCSK4
DOCK5
AJUBA
ZNF564
RGL1
ARPC5
AHSG
CA9
ARHGEF39
EHHADH
TMPRSS4
DDX23
NET1
LIPK
AGXT2
FOXP1
ESRRA
POLD4
SMG8
CDHR2
MBNL2
MSH5
CLIC1
UBE2V1
KLHDC2
TBCCD1
DNAJB11
ADI1
CCDC146
MRGPRF
RBBP8NL
IFNGR1
MBLAC1
FAM3C
DECR2
NME4
CTSB
MBNL3
NDUFS3
KBTBD4
VPS54
AQP11
HEXB
AHDC1
DNASE1
URGCP-MRPS24
URGCP
ZMYND8
IST1
PAK4
SPATS2L
CHMP4B
APOA2
ZNF782
ID1
TOMM40L
KANK1
TMEM254
NAGLU
PRSS8
METTL7B
ABR
SMARCD2
NDST1
MYOM1
BOD1
RELL1
CDCA3
ZNF165
TMEM92
RBM33
ACTB
TUT1
ADGRG1
GTF3C3
PRR5
B4GALT4
DDAH1
IL1R1
OTOG
USH1C
WDR24
CATIP
OPA3
PTK2B
ZBED9
CSRNP3
CRNKL1
CFAP61
IL31
WSB2
NR1D1
NQO1
IRF2BPL
MBL2
HNF4A
KCNIP2
PHETA1
ERICH3
TNFRSF10B
PLK2
FCER1G
SLC13A2
NUF2
ZNF219
PRKCSH
CCDC151
NPC1L1
NR0B2
KIF5B
DDC
C1orf74
RBM39
PAPLN
NOSTRIN
FAM149B1
ECD
NCEH1
BANP
INTS4
DYNC1I2
ZMAT1
ZNF487
TDP2
ACOT13
RHOBTB2
SLC23A3
TCIRG1
H4C3
H1-6
FRA10AC1
DSTYK
HPGD
PPIL2
SEC16B
MMP15
AAR2
BMF
LIMK2
STC2
DNAJC22
BCL9L
GPR137
SCP2
SLC10A5
GRTP1
PLEKHS1
FASTKD1
BCL2L1
C6orf47
BAG6
APOM
ZBTB39
USP30
C1orf174
HJV
BCL7B
LRP2
NDUFA6
ZNF747
RPL34
TPCN1
ZNF516
IQCD
UBA5
SERTAD2
ACAD11
PDXP
SURF4
GNG4
TAOK3
SUDS3
KRT8
CDC42EP4
NR2F6
KRT18
TBC1D22A
C1orf210
SEC23A
SCNM1
LYSMD1
MRPL11
AVPI1
HSDL2
TPM3
PTPRR
FBXO46
BCL3
TTR
PRRG2
NOSIP
CSTF2T
ZNF205
SOS1
CXCL17
IFIT1B
TOMM40
ACSL1
SMIM13
TFEC
DOK4
IL17RB
CHDH
SMIM11B
SMIM11A
TMEM86B
WNK1
KBTBD6
HNMT
SOCS5
AATK
N4BP2L1
GMEB2
ZNF576
IRGQ
FABP1
WWC2
TMEM245
AGMAT
RHEX
FEM1C
CERKL
C17orf75
UPB1
GJB3
HSPB3
PCNX3
MAP3K11
SPATA25
NEURL2
CTSA
GUCD1
SMIM19
SLC20A2
RBMS1
NSUN5
MEF2C
ARID5B
AKAP1
SCN9A
TAF4
PAFAH2
SUPV3L1
ADRA1D
MRPL20
TMEM71
PHF20L1
FTL
PLA2G12B
COPS7B
CYP2R1
ZFYVE1
UBA6
CRY2
GSTP1
UPK3A
PPRC1
YJU2
GCLC
ZBED1
DHRSX
MMACHC
GLYCTK
SRC
CLDN4
NFATC2
PLA2G4C
HADHB
HADHA
PUS10
PEX13
AGT
ANXA9
OTULIN
HEPACAM
COX14
APBB1
GAMT
MARK2
GTPBP4
CMAS
CPPED1
LSM1
BAG4
TMCO1
KRT34
GPR35
MRPL2
KLC4
MOGAT2
CLNS1A
NPRL2
CYB561D2
ISY1-RAB43
ISY1
GATAD1
TFPT
PRPF31
LOC388282
PEX14
DFFA
AGPAT3
ZNF444
TRMT2A
RANBP1
TMEM242
ALPI
RAP2B
PDPK1
RAB32
ASL
CREBRF
KATNB1
CDX1
TLN1
CREB3
TMEM144
NDUFA2
IK
ANAPC5
TMEM109
EPAS1
WDR46
PFDN6
KRR1
OXCT2
WDR81
TLCD2
MYO1A
MGAM
ABCC6
TRIM15
TRIM10
MUC3A
ATP7B
OR9Q2
AP1B1
TMEM167B
MSRB2
JRK
LMNA
MEX3A
GPANK1
CSNK2B
NIPAL1
CNGA1
ARL17A
TRIL
ARL17B
PDF
HSD17B11
HPCAL1
TM9SF4
NTF3
ADAMTSL3
MYD88
ACAA1
INHBE
PPP1R12B
PPP1R3D
FAM217B
UNK
H3-3B
ZNF223
COPS4
PEMT
PAAF1
COA4
OVOL1
FYB2
NCOA1
INF2
ARNT
FNDC11
NAA20
COMT
DRG2
KIAA1217
CD300LF
RAB6D
FBLN1
SLC25A16
BMS1
FLCN
HSPE1-MOB4
HSPE1
HSPD1
SLC39A5
HKDC1
TMEM127
CIAO1
SMTN
RPS19
AMOT
GLO1
TMEM79
DENND5B
FDX1
RPL12
LRSAM1
MAP4K5
ATL1
RNPEP
RALGPS1
SEPSECS
RREB1
SLC16A4
ZNF225
IFRD2
MED23
CDC34
C11orf95
COMMD3-BMI1
COMMD3
BMI1
NCS1
C11orf24
HMGCS1
C3orf52
EMP1
GBA
PLEKHG1
HNF1B
CACNA1G
VILL
AS3MT
HABP2
RAB43
NCR3LG1
MEP1A
TECPR1
HEATR4
TMTC3
CEP290
LPIN3
MRPL34
DDA1
NOXO1
GFER
MAIP1
GRWD1
KCNK10
GOLT1A
HK1
SFXN3
PDZD7
ASAH1
SLC22A18
BSDC1
FAM98B
CNIH3
SELENOH
TIMM22
ITPKC
COQ8B
DAGLA
NR2F2
RFXANK
BORCS8-MEF2B
BORCS8
GDI2
MAN1A1
CIDEC
SEMA3B
TMPRSS2
SIK3
METTL25
CCDC59
NUB1
CCNJ
MRPL21
IGHMBP2
IGFL4
TRAF4
CDK5RAP3
TOMM70
LNP1
WDPCP
MDH1
MRPL30
MITD1
ADAMDEC1
ZNF232
USP6
PMVK
PPFIBP2
SPHK2
SLC37A4
RPL18
FAM83E
PRR3
GNL1
GALM
H4C12
MRPS16
NAA60
GATB
ZFYVE27
MTRF1
CACNA1D
CCDC57
FOSL2
TBC1D16
RCHY1
MTRNR2L8
DNMT3A
PEX11G
DHX35
EIF3F
PIAS1
SUGCT
MPLKIP
CYP2A7
MICAL2
GSDMD
FGF19
RAB5A
EFHB
ATXN7L1
MTIF2
SLC2A9
AMDHD2
CDIP1
ATP5MC3
SLC45A3
RDH5
BLOC1S1
PALM2AKAP2
ABCC9
TNP1
MINPP1
NUP107
FGFR4
COX7C
RABGGTB
NIBAN2
MSRB1
C4BPB
NFXL1
TSNAXIP1
RANBP10
EDEM2
SLC35B1
ZNF461
TASOR2
SYT16
AP2A1
GSTO1
LRMDA
TSKS
DUSP3
CFAP97D1
NID1
CEP43
SHANK2
GRAMD2A
BUB1B
MAGED2
AP1M1
SERINC5
AXL
CDC25A
TMEM101
ZNF3
TMEM74B
CXCL2
RGN
ZNF155
ATXN7
ALAS1
IQGAP3
MAMDC2
MAN2C1
ENDOD1
TOB2
KATNBL1
BRPF3
ANKFN1
SEC13
TMEM37
BBS1
RAB11A
TAF11
ANKS1A
SCAF1
RRAS
GFM1
TBX4
RAB40C
RASSF9
ERCC6L2
RRP15
ACSF2
DLC1
NFKBIZ
HSPH1
SLC2A14
AGRN
MT1F
CAMK2D
RPL29
PDE6A
LTV1
BIRC2
NUFIP1
GPALPP1
MRPL40
HIRA
CTU1
RPTOR
GDF1
CERS1
MCF2L
NUP214
SOD2
PJA2
METTL8
DCAF17
TOE1
MUTYH
ACAT2
TSHB
PEX3
ADAT2
ZNF770
DNAJC11
SUCLG1
LARP1B
P2RY6
BCAR1
ERF
TUBA3E
FOXJ3
SCT
CDHR5
MRPS18C
HELQ
BTRC
HOXB2
IRF2BP1
TIMM23
RARA
APOA4
RTEL1
NEDD8-MDP1
NEDD8
GMPR2
LUC7L2
FMC1-LUC7L2
FMC1
PCNX4
STMN3
ZSWIM1
MTRNR2L2
MSH3
DHFR
EPS8L3
XYLB
TMEM45B
PIKFYVE
HPS5
GTF2H1
UTP14C
ABCF2-H2BE1
ABCF2
C19orf53
MRPS15
NR2C1
NOP16
HIGD2A