ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX748426 | HCT 116
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◢ SRX748420: HCT 116

◢ SRX748425: HCT 116

◣ SRX748426: HCT 116

◢ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX150698: Hep G2

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX702028: hESC HUES64

◢ ERX159250: LoVo

◢ ERX159251: LoVo

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

KDM6B
MAMDC2
SCRT2
KNL1
SKIV2L
NELFE
MTRNR2L8
NDUFS1
EEF1B2
MTRNR2L2
MSH3
DHFR
MIA2
PHF12
NEK2
CRYBG2
RGPD2
RGPD1
DNAJC25-GNG10
DNAJC25
ACSL5
WDR36
KIAA2013
ZFP36
PLEKHG2
ERICH3
MTRNR2L1
ZSWIM3
ACOT8
SPON1
WDR74
CSTF1
AURKA
SNRPA
C19orf54
EXOC1
DBP
SFRP5
GPX4
CCDC200
LASP1
SH3D21
PPIP5K2
SLC41A2
NR1I3
SIAH2
RPS3A
LSM1
BAG4
LOC100509620
MPI
PRKCSH
CCDC151
POLDIP3
CHST11
TRIM48
INAVA
CPLX2
PTPRF
LBX2
PRR3
GNL1
RPL34
OCIAD2
HDGF
LTB4R
LTB4R2
CIDEB
ERBB3
NDRG1
FUT5
MTMR11
SMG8
NCS1
ATP5MC3
SASH1
ZBED9
C2CD2L
URGCP-MRPS24
URGCP
ARNT
CCNI
KDM3A
ABLIM1
PAX2
MTFMT
TRIM2
RAPGEF1
TTC31
TAOK3
SUDS3
YARS1
S100PBP
C11orf49
B3GNT3
PTK7
NLRX1
TPD52
PCBP1
ZC3H10
RPL41
SLC7A5
UBE2R2
RBBP5
PJA2
SCARB1
S100A16
SLC27A5
LENG8
RABGGTB
ZNF696
MMACHC
MUC3A
LIPK
PHACTR4
CERS4
MVP
SH3D19
BORCS7
VAC14
RTBDN
MAST1
PPP5D1
CALM3
UROS
BCCIP
ACY1
PSMA5
RPL27
NR2F2
PRDM10
PRKCI
CD2BP2
CD86
SELENOI
ADGRF3
PYCARD
RIPK4
CAMK2G
CSNK1A1
MTRNR2L9
IGF2BP3
ATXN7L1
SFXN3
PDZD7
C19orf33
COX16
RAB17
MYRF
CCDC90B
FHL2
PTP4A1
TJP3
CCND2
OXCT2
CHCHD2
RNF121
LOC100133315
SERINC2
CCDC107
MLF2
TMEM71
PHF20L1
KCNMB4
NRCAM
SLC25A5
FBXO46
U2SURP
IL20RB
ZNF564
PHF14
ABHD2
TMEM169
PECR
ZC3H12D
NIBAN2
RAD51AP1
C12orf4
EIF4A2
USP37
CNOT9
TNFRSF1A
TMED4
RAD50
IQCN
HOXA3
C1QTNF1
VPS26B
NCAPD3
CREB3L3
IGSF23
KRTAP5-7
SCNM1
LYSMD1
ANKRD66
SAXO2
EFL1
PRKCD
KPNA7
DUX4
BCAR3
TRIP12
FBXO36
MAP4K5
ATL1
IDH1
SCP2
PWP1
SAMD1
FBXW5
C8G
VPS54
ROCK2
C19orf84
SHISA5
ALDH3A2
METTL24
LUC7L2
FMC1-LUC7L2
FMC1
COMTD1
PEX11G
CTSO
SPTBN4
BLVRB
ARID1A
FIBCD1
C6orf47
ARPIN-AP3S2
ARPIN
GPANK1
CSNK2B
RDH5
BLOC1S1
USP2
CITED2
BORCS6
CHMP4B
NEK6
DIDO1
KREMEN2
TKFC
DDB1
MSL1
MGST2
FCHO2
CPHXL
ALG14
RCAN1
CSDC2
SERINC5
MBD3
METTL7B
ZFAND3
CTSE
RFX2
PLA2G4C
DKK1
SCAF11
TMCO1
CORO1C
KATNB1
RPS26
PHC2
SLC20A1
NPTN
ADGRB1
SLC9A3R1
RGS3
KMT5A
SNTB2
TRIP10
GPR108
PPP1R9B
ACTG1
ROMO1
ZMYND8
SPAAR
HRCT1
SPHK2
RNF114
CERS2
EIF1AD
BANF1
RARA
GBA
ITGA3
ADPRHL1
PDPK1
ZBTB8OS
RBBP4
GALK2
COPS2
TDP2
ACOT13
SPAG8
HINT2
TTI2
CLASP1
VWCE
LAMP3
CASTOR1
SWSAP1
ZNF827
PAK4
RPS6KA1
GNAL
RAB11A
SMARCD2
SH2D5
ERBB2
POLD4
PPP1R37
ZNF165
AHSP
BBC3
NR1D1
PLXDC1
GAB1
TOB2
SMAD3
AGPAT1
UFSP1
SEPSECS
PLAAT3
PRX
GPR137
PLK2
ACADM
PYGL
PITX3
GBF1
ADI1
GTF3A
GNAT1
TRUB2
COQ4
KLK6
SPINT2
PDXP
PAOX
SELENOP
PKP4
CCDC148
VIL1
HAAO
HNF1A
CNNM3
RBKS
BABAM2
VTN
SARM1
ORC2
SEBOX
LRRC1
SEC13
PINK1
TACR2
NUMB
PANK1
TATDN3
NSL1
PCNX3
MAP3K11
SLC7A7
PCYT2
DOCK6
SLCO2B1
ZBTB48
MACC1
KIF21A
GPR171
CDK3
SMPDL3A
PABPN1
MMADHC
EPS8L2
DEAF1
SPATA25
NEURL2
CTSA
HADHB
HADHA
CLIP2
IST1
ACOX2
ARHGAP27
PHETA1
ZNF567
GGT1
NRL
DCAF11
GPR35
AHCY
AFF1
USP18
FGFR3
GCLC
LY75-CD302
LY75
SEC23A
CDC14B
EPS8L3
AP1M1
SLC19A3
AGMAT
DNAJC22
CARHSP1
ACY3
RAB37
NQO2
EDEM1
SMG5
GLMP
VAMP5
HNMT
PRUNE1
MINDY1
PLEKHG6
GUCD1
DENND2B
B4GAT1
ABCC6
NCOA4
PCGF1
DHRS3
RHEX
DOCK5
CDR2
SRSF11
LRRC40
AJUBA
F10
WEE1
C2orf88
AHSG
CYP17A1
COPS4
ZNF219
PUS10
PEX13
CDHR2
MYD88
ACAA1
NR0B2
TRIM15
TRIM10
FBXO31
PPIL2
TIGD3
PDF
AQP11
DENND5B
APOB
SUCLA2
SDCBP2
GLRX
SPATA2
PLXNB2
TMEM177
GTF2I
TRAF7
XYLB
NQO1
LOC100129484
CA9
ARHGEF39
CBS
ANKS4B
SLC45A4
BCAR1
AFP
GDI2
LARP1
TCIRG1
LURAP1L
MRPL2
KLC4
TK1
AFMID
NDUFA6
KIF1C
INCA1
BLOC1S5
CTDSP1
EIF6
ATP7B
RAB5IF
PTDSS2
KLHDC2
ANO9
CCDC142
SMARCD1
PERP
MLXIPL
TMBIM1
IQANK1
FAM83H
CBY3
ADAP1
HGD
FYB2
MAN2C1
GJB1
IQGAP2
IL32
NID1
CYB5R3
ZNF232
USP6
PLEKHB2
PPP1R27
MCRIP1
WNK4
SRMS
APOC3
TBC1D22A
GSDMD
KDELR2
IFNGR1
GAL3ST1
SOS1
APOA1
NEK4
ITIH1
MGAT1
C11orf24
ZNF764
GNG4
MBNL2
RAB43
MSH5
CLIC1
LRP1
HSPE1-MOB4
HSPE1
HSPD1
TRIM47
CPNE7
FASTKD1
PALM3
CPPED1
PDE11A
SEPTIN9
HINT1
PSPN
ALKBH7
SPG7
MAN1A1
UBR4
SPPL2B
LSM7
PEPD
IL1R1
PROCR
CFB
PPP4C
RUVBL1
C9orf64
IRF2BPL
ATP5F1D
LTV1
SMIM19
SLC20A2
PRAP1
CDKN2AIP
H4C3
H1-6
TRIM14
AGT
C1orf174
GIP
PRSS8
F7
C1GALT1
UCKL1
ALG11
COL13A1
TECTB
OPA3
TNFSF15
NHSL1
CMC1
WDR81
EEFSEC
ENDOD1
C11orf86
SMAGP
NEU4
DNMT3A
MBL2
EPHX2
MIA3
ZNF184
EGLN1
TADA1
ABCD3
DMAP1
ANXA9
ZFAND2A
CXCL17
SH3YL1
ACP1
TNFRSF10B
SH3BGRL2
TRAF4
C3
INHBE
QPRT
UBA6
PRXL2A
MIDN
KHNYN
CBLN3
HAGH
FAHD1
UBA5
AKAP1
TM4SF5
TCAF1
DOK4
ADGRG1
GPRC5C
STX16
SCN9A
PEMT
VEGFA
HJV
NCR3LG1
SMYD5
PRMT1
HSD17B11
HCAR3
BCL9L
SIN3A
SEC16B
LPP
GLYCTK
CRK
MTIF2
ATXN7
ZNF710
ZNF362
POLR2E
BLCAP
SARDH
OTOG
KIF5B
STK24
RAMP1
OSBP
MST1
HEXB
RAB32
DIP2C-AS1
BRCA1
MYADM
CCL16
PLXNC1
PLXNB1
MTMR4
PDGFB
MMP15
LRP5L
HMGCS1
EFNA1
PRR35
PCGF2
DCBLD1
PNOC
FAM20A
LRRC3
SLC2A9
PTTG1IP
BAIAP2L2
TUBG1
RETREG3
SLC28A1
ABHD12B
GIPC2
TUBG2
SPDYE14
SPDYE10P
RHBG
CIDEC
ZNF512B
AMACR
BIRC2
STARD7
SERTAD2
SPATS2L
TLCD2
RBP5
CCR6
PMVK
SHF
CSRNP3
VTA1
NMBR
CDKN1A
RASA4
SLC35A3
ISOC1
OR5B12
ASL
RBIS
MKKS
JMJD1C
SPPL2A
SOD2
CAMKV
MBLAC1
PPIAL4C
PPIAL4A
PACSIN3
TBCCD1
DNAJB11
ANKRD40CL
RBMS1
PRSS3
DLX2
PAAF1
COA4
TMEM150A
ZC3H3
PICALM
PPP1R12B
ACAD11
SLC2A14
TANK
NUDCD1
KANK1
SEH1L
SLC47A1
DDC
BCL2L1
USH1C
INF2
SYNJ2
SECTM1
PGF
SCLY
INTS9
HMBOX1
KIAA1522
TACO1
MRPS11
MRPL46
CACNB2
RPS7
PPIAL4H
PCGF5
SLC17A2
TMEM140
FNIP1
COBL
ABCC3
KIFC3
MOGAT3
TRPM1
MYL12B
ZNF214
TMEM45B
NLRP14
LCAT
ETFB
ABCB6
TMEM127
CIAO1
MYO1A
MSRB1
RENBP
NEU1
CYP4F3
RHOC
ASGR2
ABR
RASA4B
TMEM89
CEACAM16
MLX
COASY
PAK1
IL17RE
DNAJB3
SMLR1
ATXN2
FZD5
SRC
CFL1
HPCAL1
ODC1
PPIAL4G
AGPAT3
WT1
COMT
POLR2H
CLCN2
STAP2
MPND
KDM2A
DCDC2
IQSEC1
IYD
ANKRD39
LSM14B
IL17RB
CHDH
TAF4
LAPTM4A
ITPKC
COQ8B
ASAP2
ZNF302
OTULIN
C5
ENTPD8
RHOQ
ATP6V1E2
PPIAL4F
PPIAL4E
PPIAL4D
ZNF839
KRT8
CAPN2
CSRNP1
SORBS2
CPNE6
AHDC1
MOV10L1
SEPTIN4
GNA11
LTBP4
ETFA
UGDH
UGT1A1
INTS4
GALT
CDC42BPA
GPT
SLC35D1
C2orf42
DRG2
PLEC
GPBAR1
LOC102724265
FEM1C
PCDH1
ADRA1D
HNF4A
CCDC93
NET1
LCE2D
SLC39A5
C1orf210
GDF15
AMDHD2
APOA4
SLC9B2
CREB1
ORM2
GALM
CDK5RAP3
ZFYVE27
ENTPD2
APOE
CNOT1
PGLYRP2
TSPAN3
TJAP1
PACSIN2
EIF4G3
REG4
PGPEP1
MRPL20
ZFAND2B
PIK3R2
RNF126
ANK3
ATG16L1
ANXA2
ZDHHC19
SLC51A
ST3GAL6
C1QTNF6
CPT1A
CDIP1
PUSL1
ACAP3
VPS28
FETUB
CLDN4
C16orf70
AAMP
NIPSNAP1
GALK1
PDZK1IP1
CASTOR2
SLC12A9
EPHB4
ZNF444
TOGARAM1
KLHL28
GPHA2
ETV4
GAMT
NAPEPLD
APBA2
SPTBN1
GMNN
EHHADH
CAMSAP3
CHST13
C4BPB
ARHGEF10L
LOXHD1
APOA2
OR9Q2
ACSF2
DTX2
GRB7
PLTP
CRYGC
PLG
CEP68
RNASE4
ANG
SOAT2
GUCA2A
TNXB
RIPK3
ADD3
NFATC2
MAP3K14
NODAL
GATA3
ZNF747
CCDC146
CAPN11
SBF2
NRSN2
CMPK1
FABP1
CLDN14
UMPS
MYO18A
HMOX1
RFPL2
STARD4
GSN
BCAM
LAMTOR5
C2CD2
EMILIN2
OVOL1
TMEM181
TLCD4-RWDD3
TLCD4
PRM1
CCL20
TPCN1
PDLIM2
PIKFYVE
DDX19B
MPV17L
RCL1
MRGPRF
PIEZO1
SOCS5
LIN54
MINPP1
PKLR
WFDC3
DNTTIP1
CHD9
DHX34
KIDINS220
AGRN
DTX4
RNPEP
CREBRF
RAB11FIP4
PGAP3
SLC29A3
C2
TMEM139
GSTK1
CASP2
CLPB
WDR97
MAF1
TMEM254
SDC1
NGEF
RPS24
POLR3A
TST
MPST
RASSF5
RAP1GAP