ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX059714 | VCaP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◣ SRX059714: VCaP

◢ HDAC3: STRING

PMF1-BGLAP
PMF1
PRICKLE1
RAE1
PASD1
MAGEB10
NBPF6
APP
ARID3B
SCGB3A1
MAMDC2
KDR
SLC45A4
ZBTB7B
PMM1
DNPEP
ETV4
TM2D2
ADAM9
TENT2
CALML5
PIK3AP1
NGB
PEX10
LECT2
PROP1
NBPF4
LGALS8
NUDT3
APBB2
SMIM34A
FRMPD1
LAMA3
GRM3
TMEM216
GALNT18
CDK14
ACMSD
RUVBL1
EEFSEC
SBSPON
CXCL8
NPR2
TMEM40
JPH4
C6orf58
PPARGC1A
ANGPT1
TIPARP
HDGF
STEAP4
HIGD1C
SMYD1
SCML1
SGK3
TRIM52
MRGPRD
LDB3
TSGA10
IFRD1
NWD1
DUX4
IRX4
BCL2L13
HIF3A
BEST3
UNC45B
ARSG
NUDT10
TRPT1
NUDT22
DNAJC4
SCUBE3
SCNN1D
PCDH7
ERN1
PPP1R15B
TBL1X
UGT2B10
JPH3
DAAM1
SUPT7L
SLC4A1AP
ATXN2L
SASH1
MAX
ZNF610
MUC3A
RAB37
KRT4
RFPL3
CDCA7L
TNK2
HAPLN2
GLYATL1
ATOH8
DDX19B
AARS1
ANP32E
MAGEA10-MAGEA5
MAGEA10
STC1
SKIDA1
WDR74
MTCL1
PDE9A
EXPH5
LGALS7B
ZBTB18
MX1
SCIMP
RRBP1
NFIC
ERCC1
PRR20E
PRR20D
PRR20C
PRR20B
PRR20A
DGKK
LEFTY1
ADRA2C
MKLN1
WDPCP
EYA3
SULT1C3
POLR2J3
UNC13A
PRRT1
PPT2
ATP6V1G1
TMEM204
DHX36
TUBA3D
DIDO1
TGFB3
IFT43
NOVA2
DUSP6
ISX
LOC100509620
KRT3
NPTX2
TMEM100
GABRA2
SLC16A8
TLK1
TIMP2
MSX1
KLK3
PFKFB1
IRGM
BDNF
DPP9
TEPSIN
NDUFAF8
FAM234B
PIGZ
MBOAT2
ARHGAP22
CLDN8
ARHGEF38
IGFBP1
TMCC2
MUSK
KCNQ3
MAT2A
DUS1L
MMP17
SEC13
VSTM5
TRIM48
TRMT12
SLC29A2
DAB1
PDGFA
MTRNR2L1
ANKRD40CL
HES6
UGT2B28
RPH3AL
EIF4EBP1
PALLD
HDGFL2
ZNF771
CYP3A43
ANK3
IFNLR1
KCTD7
DLX1
CLIC6
TUBA3E
MKS1
IL20RA
FAM222B
TFCP2L1
CA8
TAOK3
PFKFB3
SLC30A4
ADAMTS8
SEPTIN9
VAT1
RND2
MTRNR2L2
MSH3
DHFR
TMEM237
BIRC5
ZNF559-ZNF177
ZNF559
SH2D6
STK32A
MAPKAPK3
FBXL20
FNDC10
NEBL
PNMA6A
EFCAB12
OR13G1
LOC114841035
FKBP2
VEGFB
MTMR9
ZNF331
TRIM49D2
TRIM49D1
SENP1
PFKM
LBHD2
CHCHD5
CDC7
LSM11
SYK
UGT2B11
SLAIN1
STAU2
CDRT4
SAXO2
EFL1
ALDH3B2
SLC2A5
PHGR1
MACROD1
LAPTM4B
ITPRID1
TPT1
ZNF516
TSPAN3
SIN3B
DECR1
PYCR2
EDN3
SMIM13
FKBPL
ATF6B
PFKL
HIVEP1
KSR1
TTC7A
PHF19
MCFD2
ATXN7L2
DMD
MPP1
ZCCHC14
TMSB15A
GPR173
CMTR2
TPD52
PRDM1
PEBP1
CDYL
CBY3
TRAF3IP2
GAPDHS
NFIB
SHF
PHACTR4
WIZ
PRRC2B
AP1S3
CREB3L1
WRNIP1
NUDT9
NME4
DECR2
ANPEP
KIAA1522
WASHC3
TRIQK
ZNF341
C3orf20
MTRNR2L8
ESRP2
TASOR
NIBAN2
C1orf116
NPBWR2
TUT1
CPLX1
SRRM4
PRR15L
C4orf51
TTLL12
PRKAG2
TLE1
TRABD
CX3CL1
CDKN2AIP
CCDC200
C3orf14
CCN5
NSMAF
CD99L2
SCAMP2
DBP
RGL3
RNF115
POLR3C
USP30
USP44
HUS1
LMOD3
CD93
DLG2
SHLD2
GLUD1
FRG2
EFNA1
SLC50A1
BRD2
UTRN
NFIX
MOCS1
TMEM266
GSTP1
RAB4A
MNS1
SUSD4
PLIN1
MYH10
HOXC6
HOXC5
SMYD3
HSPA4
UNC80
MOGAT2
INPP5K
RGPD2
RGPD1
ETV5
PAX6
AUTS2
ACSBG2
CYRIB
NUP160
MAPK12
CDKN1A
THRSP
SOCS2
TMPRSS11F
ZDHHC9
SNAI1
REG1A
PRELID2
INIP
TBC1D14
EDARADD
VPS37C
MTNR1A
OTUD7B
AGPS
ZNF287
PRMT8
RNF186
DSCAML1
PIH1D2
NKAPD1
NR2F2
ECE1
RAB36
GSPT1
LRRC30
HSPA12A
ENO4
SPIDR
ABHD2
KCNS3
FAM107A
HERC3
TRIM68
GPR153
FZD9
BBS1
BCL6
ZNF547
TRAPPC2B
QKI
G3BP2
DCLK1
B4GALNT3
RERE
SPATA6L
PLPP6
HSD17B6
THAP11
NUTF2
CENPT
ADGRG7
PDE4D
UNCX
COPRS
POLR2J2
RUNDC1
PTGES3L-AARSD1
PTGES3L
PER1
RHOH
KCNH2
RASAL2
ATL3
NMI
LDLRAD4
SRP9
XKR9
REP15
PSCA
LACTB2
RPL22L1
CDK3
TRMT61A
CKB
STX16
FZD1
RTN1
THAP4
GPX5
CYTH1
BLNK
ANXA1
ANKRD28
PXYLP1
GRHL2
RASSF8
KCNIP1
ITGB3BP
EFCAB7
FAM214A
ARHGEF7
LINGO1
ZG16B
GLI2
CAMK1
BCAR3
KLF15
CST2
CFAP74
NR1I2
NAPA
TAS2R42
PAH
OR1L1
CD177
TMEM11
SRSF10
FAM174B
NME1
PMVK
PF4
NFKBIL1
DDX39B
ATP6V1G2
SBF2
CDHR3
DHRS13
RAB11FIP1
ZNF614
C9orf152
CAMKK2
TMEM87A
GANC
TMEM217
TBC1D22B
FOXQ1
SPTBN1
MSMB
SYVN1
CEBPD
CCDC86
COL23A1
TXNRD1
GREB1
SMOX
FAAH
HERC5
ZNF200
ST6GALNAC4
FAM110B
TMEM210
LRRC26
MMAA
SLC2A9
SLC13A1
TBC1D9B
TAFA4
RGS3
CPT1A
FAM107B
MRPL48
SIRT4
SCUBE2
HDAC4
BRD3
NBR1
AK4
MAP3K6
INPP5A
CCL14
TNFSF15
SUGCT
MPLKIP
NFKBIA
PANK1
ST3GAL6
MAD2L1BP
KRTAP9-6
GTPBP2
FBXL5
EVL
GMNN
H4C3
H1-6
DNAH5
MRPL21
KRT28
IGHMBP2
MTHFS
RUNX1T1
EPHB3
EPB41L4B
CHMP4C
HOXA3
ARHGAP40
RAD52
CORO2A
SLC6A11
ITPR3
GSG1
LOC105370980
VPS13B
EMP1
SREBF1
LFNG
SELENOS
LRRC25
MMP15
LPCAT3
OTOL1
B3GNT6
C11orf24
MED30
TMEM68
TGS1
TRIM33
DNASE2B
CGN
RIN2
TBPL1
GOLPH3
KRT35
EI24
VPS26B
NCAPD3
CCDC68
ADAMTS3
SKIL
ATL1
NUDT16
MAP4K5
UBB
MPHOSPH10
MCEE
PGBD3
SLN
SMAD4
ZCRB1
PPHLN1
RP1
TNRC6B
RAB11A
DPY19L4
SYNM
SLCO1A2
PACSIN1
B3GAT1
ZNF579
PRXL2A
GPR37
TMTC2
TCHHL1
HEXIM1
ANO6
PDZK1
MLLT11
CDC42SE1
MBNL1
CARTPT
RRP1
SEMA6D
CEMIP2
RPS27
RAB13
CEP162
HEXA
WASHC2A
LAMP1
WASHC2C
AP5Z1
PDGFB
FRG2C
ENTPD4
SLC4A2
CDK5
MYCL
RALGDS
SPATA25
NEURL2
CTSA
UBE3C
MEF2C
TNC
KCNMA1
SUMO3
SH3GL1
CHAF1A
GET4
ANKS6
HM13
DAZAP1
MIER1
SLK
ADGRB3
CLCN7
FGGY
ALG6
TNNC2
SNX21
MEOX1
SUMO2
SCAMP5
PTBP1
ADAM23
ST7
OTUD7A
KAT5
ARHGAP32
ARID5B
COMMD9
SMARCA4
MACC1
FLYWCH1
BLOC1S4
NPEPPS
STRA6
ACVR1B
SBK1
AP2A2
NSD1
PARD6B
IGLL5
TFDP1
TMCC3
GRHL1
PRKCA
SFXN1
RABGAP1L
CORO7
CLSTN1
NR5A2
NSF
EFNA3
SAP30
ANGPTL4
CBX7
FBXL3
ZNF668
SEC22B
MINDY2
CHD7
FASN
UBE2E2
CACNA2D2
SPTAN1
MRPL45
GRIN2D
PLEKHF2
IRF2BP2
SUMF1
NDUFA4
SLC1A7
KDM7A
WBP1L
CELA3B
ACTN4
PPP5D1
CALM3
DTNB
PHF21A
CFAP206
CUTC
COX15
NOXO1
GFER
C17orf58
PRKCE
MSS51
FCHSD2
NFASC
PATZ1
C1QTNF1
IKZF2
PHIP
DIP2A
PTP4A3
IGF1R
PCIF1
LASP1
SYNPO
UBXN2A
TEX46
KDM1A
USF2
UPF1
ATXN7L3
CHIC2
TGIF1
OAZ1
ADCY9
CLN3
APOBR
PTPRG
LYPLAL1
TRIL
ATP6V0D1
AGRP
LCOR
BSG
LYPLA1
CABIN1
MELK
ZBTB14
ZNF217
IFT140
CRAMP1
CCDC88A
SLC25A11
RNF167
MYEOV
PVALEF
AATK
SRSF6
ARHGAP25
SLC35A5
SCYL3
B3GALT5
ATG3
PYCR1
TRMO
PEAK1
HMG20A
USP28
GADD45A
GAB2
EIF4H
MRFAP1
GNB1
PKNOX1
RYK
THEMIS2
CTBP1
STAT5B
LIFR
PTBP3
MLLT10
TMEM91
CD82
B4GALT2
MDM2
SMURF1
CBX6
C3orf70
FEZ1
NEK6
MAST2
LIMA1
ATOH7
ARPC2
SPRTN
EXOC8
TMEM239
SNX16
C20orf141
PWP2
LOC102724159
PPP2R5A
ANKZF1
NF2
SLC8A3
RABEP1
RMND1
ARMT1
SNX19
SLC6A6
FBXL22
APBB1
AMMECR1
KLHL41
AVEN
RBKS
BABAM2
BTBD3
NAGPA
EXOC6
HHAT
AMOTL1
PRMT3
MRGBP
RRAGC
ACACA
THAP1
TCTA
RHOA
OPRL1
LKAAEAR1
RALGPS2
P4HB
SNX12
MYOG
TMEM120B
FHL2
SPNS1
UBAP2L
GPSM1
C1orf43
ASF1B
YEATS2
RNF152
PXN
FZR1
UBXN4
SGPL1
ZC3H7A
SULF1
C1orf198
DOK7
DENND2B
PTPRF
WWP1
VGLL4
SIAH1
TAOK1
ARRDC3
THAP12
GVQW3
AFAP1
NCOA5
UBE2E3
MAZ
ZNF787
MTRNR2L9
GBA
BAX
HAGH
FAHD1
ATP6V0B
ZNF507
PAPSS1
PHC2
BCL3
PCBP4
NSD2
MTHFR
CLCN6
UBE2Q1
PSMA1
UXS1
AMDHD2
CHST12
NEURL1
VPS33A
RUFY1
HP1BP3
TBC1D5
MCOLN1
TSPAN7
SINHCAF
TCAF2
SYNCRIP
LGALSL
MTMR3
MRFAP1L1
UPP1
TCF7L2
SEMA3D
LIMK1
GPAT4
DLL3
SRCIN1
FZD3
FBXO16
C12orf66
BCL2L1
GNA13
CPEB2
LARP1
CLIP1
HSP90AA1
ATF3
TADA2A
SPEN
RBM14-RBM4
RBM14
C15orf61
THUMPD2
PTK2
UBTF
PDE4DIP
MPP6
MAPK8IP1
LUC7L2
FMC1-LUC7L2
FMC1
APOC1
VSTM2L
OSTF1
NMRK1
ABCA5
SSBP4
IFI44L
RXRA
HHIPL2
PDIK1L
C10orf95
TNNT1
KLF16
PDS5B
USP2
MAP3K2
ITPK1
ARHGAP28
MCM9
FREM1
ROCK2
CYB5R1
HES1
INKA2
ZAR1L
LTBP4
BRCA2
DCK
GRAMD4
GNB4
DGKZ
MYL5
MAP4K3
ATP5ME
FOXB2
TRMT2A
RANBP1
CDON
HNRNPU
PPP4R2
BRD4
LRRC20
BAIAP2
THOP1
SGTA
EPHA2
TP53BP2
SPRED2
REST
DENND1A
ASPH
DHX15
FAM81A
PRUNE2
NELFCD
SYNPO2L
HNRNPH2
GLA
DLGAP4
PAIP2
MYBPC2
TCHH
HIF1A
CTNNA2
CDKL5
TMCC1
DTNA