ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5930140 | RH-4
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◣ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

MTRNR2L2
MSH3
DHFR
ARID3B
HEXA
MTRNR2L8
FRG2C
LAMP1
WASHC2A
ENTPD4
WASHC2C
MTRNR2L1
PDGFB
AP5Z1
CCDC200
TMCC3
MEOX1
ERCC1
TRIL
SPATA25
NEURL2
CTSA
TNC
FRG2
MUC3A
CORO7
DUX4
TNNC2
SNX21
MSS51
CLCN7
ANGPTL4
ARID5B
WBP1L
CELA3B
ZNF668
MACC1
C1QTNF1
COL23A1
RGMB
KLHL41
AFAP1
CSNK2A3
GPSM1
KCNMA1
THEMIS2
SUMF1
TMEM91
ZAR1L
BRCA2
STRA6
KAT5
ARHGAP25
TRMO
TMEM239
C20orf141
IGLL5
SYNPO
SLC1A7
STBD1
PVALEF
AATK
GADD45A
OR51T1
COMMD9
CLN3
APOBR
TGIF1
SLC35A5
ATG3
ATP6V0D1
AGRP
GFRA1
ABCC10
LTBP1
SULF1
CLDN5
PYCR1
FCRLA
IFNLR1
NFIB
BCAT1
SEC22B
SLC8A3
CD82
PRL
FREM1
SNX16
FOXB2
GBA
GET4
SPG21
MYPN
EPHA2
MYEOV
TNNT1
CYB5R1
IQSEC1
SMYD1
WDR74
UXS1
CLIP1
SLC19A3
TMEM120B
DOK7
FHL2
MYOG
TNNI1
MUSTN1
ITIH4
PCBP4
HDAC9
NNAT
BLCAP
EXOC7
TBL1X
HAGH
FAHD1
FLCN
B3GALT5
UPP1
CMTM2
PALLD
ZNF92
ARL14EP
ZNF507
TCAF2
TMCC2
ITSN2
TES
MYBPC2
HERPUD2
SLC12A3
VGLL4
SPAAR
HRCT1
DTNA
TMEM205
RAB3D
CCDC159
AMDHD2
SH2D7
PTPRD
PDZRN3
PAFAH2
MTRNR2L9
UNKL
NAGPA
ASF1B
TCF4
RDH5
ITGA7
BLOC1S1
HPCAL1
MFSD1
DPYD
CDH7
RRAGC
SBK2
BCL3
MAP3K7CL
HHIPL2
C20orf204
VPS33A
MYOD1
LIMK1
PDE4DIP
RFTN1
HNRNPLL
KDSR
TBC1D9
SLN
SMARCD2
MYLK4
SPNS1
RPS7
EN2
TCF7L2
NDUFA4
PTGIS
PRUNE2
HNRNPH2
GLA
ITGB3BP
EFCAB7
LURAP1L
RASGRP3
MYCN
BAX
LRRC47
CREB5
RINL
TNRC6B
IL32
RYR1
NUTM2F
NES
GIT2
ANKRD13A
TNFSF15
AGTR2
ID3
UBE2Q1
CNN2
TMEM40
SKP2
LMBRD2
SYNPO2L
CYP27C1
TBC1D5
SOBP
CELA3A
ACTC1
ANKRD1
APOC1
RMND1
ARMT1
TMEM167B
CCN2
FAM200B
ALK
HES1
PROM1
UCHL5
RO60
SVIL
EZR
AMPD3
INTS10
NAV2
KLF3
SSBP1
KDM3A
FGF16
SLC38A8
FLRT3
ATF3
FGF6
LBH
TRIM16L
OR14A2
BAIAP2
USP2
MYL5
ATP5ME
DAPK1
MARCHF9
CDK4
EYA1
PPP6R1
SLC44A1
NNMT
OPRD1
ACOT9
SLC25A34
NUP50
MYL12A
KANSL3
FER1L5
S100A2
BAHCC1
HRH1
MXRA7
SH3PXD2A
CRACR2A
SPATC1L
PTK6
SRP68
SLAMF1
TNNT2
NUTM2G
NAPA
ARMCX5-GPRASP2
ARMCX5
CRYGN
ZBTB18
CDRT4
MYCL
SREBF1
RBPJ
VTA1
NMBR
NPEPL1
MCU
CNN3
MAST4
VSTM2L
TP53AIP1
ANKK1
MINDY2
CHD3
MYH7
SPATS2L
PHC2
OCLN
NTSR1
WNT1
MSGN1
G2E3
SEMA3D
SYNJ2
MAPK10
PLXNB2
YARS1
S100PBP
ACVR1
PRKAG3
INTS12
GSTCD
MCOLN1
SERINC2
TP53BP1
RGS12
PRIMPOL
CNBD2
CASP3
ARHGEF2
SYTL2
NPAS4
LRRC17
USPL1
HMGB1
SYNE3
ZCCHC24
STYXL2
GPA33
CHST12
SSTR5
ZNF335
ABLIM1
SF3B6
FAM228B
TP53I3
RALGDS
TEX46
KDM1A
ARID5A
HS1BP3
NUDCD3
COL16A1
IZUMO2
CCNG2
CGGBP1
C3orf38
LSM12
G6PC3
TLN2
SPRED2
LMF1
CARD16
TBX2
SLC1A5
BTG2
SYTL3
MYO18A
CCNO
MGP
FSCN1
ABHD2
KLHL12
IFNAR2
PPP1R3D
FAM217B
SNRPB2
PLAU
PCLAF
ATP6V1C1
PBK
MED18
SERP1
EIF2A
C1QTNF7
ANXA6
BMF
IGFBP6
SOAT2
ENTPD2
GXYLT2
MAMSTR
ERI1
TMEM131
UTP3
SUPT7L
SLC4A1AP
CBWD5
CBWD3
ODF2L
SEM1
RPA3
RBM43
INKA2
HOXC13
CHD2
TDRP
TACR3
WSCD1
LPCAT1
GCK
SLC25A26
TNPO3
CASD1
ZBTB21
EFNA5
ST7
KANSL1
MTHFD2L
GNA12
CEP162
WRN
PURG
MDM2
RAD9A
SPRY4
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
STK24
MTBP
MRPL13
AMZ1
ARL6IP1
TBC1D19
COMMD4
NCAM1
CLMN
MAB21L3
VAMP5
HAAO
TRIM62
SLC38A10
CCNI
ST3GAL5
ASB18
COX7A2
ZNF622
PROSER1
NHLRC3
BGN
DZIP3
CIP2A
SIX1
NBL1
RAP1B
JDP2
C2orf16
OPRL1
LKAAEAR1
ANKRD12
C10orf67
SSBP2
TMBIM4
SCAF1
RRAS
NOXO1
GFER
THAP1
VPS11
RPUSD4
FAM118B
CDC42EP3
SLC4A2
CDK5
PIP4P1
MARCHF8
PSEN2
TANK
SLF2
IGSF10
RRP15
PPIP5K2
TM4SF4
RARA
KLHL30
CDH11
CHMP2B
RBM48
PEX1
ARID1A
TPP1
IFFO1
PCNX1
HSPB2
CRYAB
C11orf52
E2F6
PHF23
DVL2
FIP1L1
GPX4
CAND1
ZADH2
ITPK1
UVRAG
TEX36
PSME1
FITM1
CCDC174
PCBP2
SH3BP4
RRN3
PLEKHS1
ATP6V1H
SMAD3
MNAT1
SPATA9
RHOBTB3
ARID2
MTF2
AZIN1
CDK5RAP2
TSPAN31
TBC1D13
MAP3K7
AGAP2
MUSK
NR2E3
GRN
WNT10A
UBB
NUP42
DARS1
PSMA5
PIH1D2
NKAPD1
BIN1
SH2B1
THAP10
LRRC49
LRRC58
RXRG
WBP11
STAT1
CCDC9B
C12orf60
SEPTIN9
ABCC3
ZNF32
AFF1
SF3A3
CASQ2
FANCC
RPL22L1
ZNF593
MRAP
C1orf232
RAPGEF4
GTF2B
NFIA
WDR11
CACYBP
THUMPD3
GPR146
LFNG
PER1
PEX3
ADAT2
NAGLU
DENND2A
INPP4B
RGS3
SH2D3C
POLR2M
NBPF26
NBPF19
NBPF14
TUBA1B
RTKN
ATP6V1G1
PALD1
LOXL1
MSL2
RRAD
N4BP2L2
CCDC146
TTC30A
PPP4R3B
DAPK3
EXOSC8
ALG5
KCNF1
SLC2A10
INMT
MTMR9
PLAAT5
MBNL2
DNTTIP2
LOC100421372
HSPA14
DBF4B
CDNF
WASHC5
NSMCE2
KRTAP5-3
CHRNG
RBMS3
PNPT1
MEF2D
EVPL
HNRNPD
OSGEP
APEX1
ALDOA
IL26
PLEKHD1
ARMC8
RIMS4
EFHC1
MPRIP
CCDC15
JMJD1C
VGLL3
MRPL44
EPS8
TBC1D30
GNS
TSR3
GNPTG
PPM1D
ZNF143
SLC22A8
FAM120B
DLL1
POMZP3
NUP205
RBBP5
ZNF519
SLC35E2A
ICA1L
VPS50
HEPACAM2
ANKRD40
COX16
GBX2
NKAP
SELENOT
THADA
LSMEM1
SGIP1
STK36
RNF25
STXBP5
PFDN4
MTMR14
TPM2
MYL12B
HOXA3
C2orf49
WDR5
ARHGAP28
OTUD7B
MYBPH
TMEM230
NCKAP5L
TAMM41
POLR3F
DZANK1
TP53RK
SLC13A3
ARHGAP24
KYAT1
FMO1
SGO1
WASL
ZNF212
SCAF11
HSD17B11
ERBB4
ARRB1
MATR3
PPCDC
ZNF775
PIPOX
KLHL7
INO80C
ZNF609
FREM2
ERCC6L2
ATP6V1E1
DCAF10
MEF2C
TRIM55
PUM3
NUF2
MMADHC
ZNF397
ABAT
ATP5F1E
SLC38A7
KAT6A
MTERF1
RHOJ
METTL15
KIF18A
SETDB1
ZNF644
NKIRAS1
WDPCP
TNFRSF19
ZSCAN30
RPL15
SHPRH
MDH1
COA7
FAM240C
SETD5
LSP1
NEXN
CAV3
CHMP1B
ELAPOR2
PLCD4
WARS2
FLT1
CRBN
NUP107
RPL27
SATB1
HSPB1
RTN4
MOB4
FAF1
KANSL1L
HSPG2
COMMD1
TRAF4
CITED2
CDC7
ADNP
SLC29A2
RAB5B
TRPM4
HRC
PCOTH
MIPEP
DAB2
KRT80
CFAP69
NBEA
ZNF830
XRN1
CCT6B
CHMP7
C8orf58
MC2R
MTFR2
TTC26
STON1-GTF2A1L
ALPL
FANCD2
CCAR2
ATP5MC1
ZNF343
ICE2
COMMD2
TRIM47
ATR
SLC38A2
TMF1
USP46
LMNA
LOC114841035
FKBP2
LTBP4
THOC1
UBXN2B
EPHA3
RAB11B
PPP1R14B
SMARCE1
TRMT5
SLC38A6
FDFT1
STX16
C3orf14
ZNF292
C5orf51
PSIP1
CCNC
ERICH4
DMAC2
EIF4A2
METTL25
KRR1
CCDC59
SEMA3A
NXT1
NDE1
MFN1
MARF1
ANKRD29
UBE2H
ARNT
RCHY1
PEX2
ZNF684
OGFRL1
CDC37L1
MEF2A
TMEM238
DDX20
IPP
TM9SF4
TMEM190
HFM1
KMT5C
TMCO1
LIMCH1
HBS1L
CALM2
ERMARD
LEMD3
MAPRE2
EPM2A
MICAL3
ZCWPW2
AZI2
UCKL1
ZNF112
DMTF1
KRIT1
ANKIB1
PREPL
ERLIN2
CAMKMT
TBPL1
HMCN2
LRRC74A
GPN1
CCDC121
ZMPSTE24
ANKRD50
SPAG8
RESF1
HINT2
ALG9
CXXC5
RPS12
GNG11
TNFRSF10D
HOMEZ
DMPK
HPS5
GTF2H1
TXLNB
KIAA0754
ALOX5AP
COL20A1
CNOT2
CEP120
PPFIBP1
CYCS
BECN1
MRPS23
SERPINI1
PDCD10
ZER1
LSG1
MIDEAS
CFLAR
LRP5L
RARB
RAB11A
NBPF1
SLC33A1
HBP1
SLC35A1
PUS10
PEX13
ATG4C
ZBTB6
SUGT1
PAMR1
NME1
ELOVL6
GMNN
UFM1
FRA10AC1
FAM98B
PDAP1
PACRGL
BUD31
STARD4
TOMM5
TMEM39A
POGLUT1
LARS2
SCN3B
PUSL1
ACAP3
ACHE
COPS4
HIPK1
SRPX2
DHX8
BMI1
COMMD3-BMI1
COMMD3
FZD1
MTRF1L
MYCBP2
ZCCHC3
CPED1
OPA1
VAMP4
IGF2BP3
APBB2
RUNX1
SLC24A1
ZCRB1
PPHLN1
RPL5
PRELID3A
COX10
PVALB
RFX3
HNRNPDL
ENOPH1
DDX5
CEP95
ALLC
NRAS
HSPE1-MOB4
HSPE1
HSPD1
ING3
PARP2
ZFAND5
PATL1
TAF13
MAGI3
CTNNAL1
DUSP6
DGLUCY
NDUFV2
GPATCH8
RPS6KA5
SECTM1
PLEKHM3
MYL6B
MYL6
OXNAD1
DPH3
NUP54
SHOC2
BBIP1
NDUFAF5
ESF1
PPIG
GLRX
ANKRD18B
STAG1
THAP5
DNAJB9
ACTR3
STARD3NL
NEMF
DDAH1
ZRANB2
CCN1
MTHFR
CLCN6
YTHDF2
RIN2
ANO6
HMGA2
GCLM
LDHB
DLAT
TRIM45
SMG8
SCNM1
LYSMD1
EMSY
TINAGL1
ATP2A3
IRF2BPL
SLC35D1
NUDCD1
ATP2A1
TOP3A
SMCR8
ADGRL2
CCDC169-SOHLH2
CCDC169
ZNF780A
PCNP
HACL1
BTD
SLC9B2
PTPN1
PHF5A
KDM5A
CDH15
CCDC77
ACO2
ETV4
DCDC1
MKRN2OS
OLFML2A
PLSCR1