ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX017705 | CD4+ T cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◣ SRX017705: CD4+ T cells

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

SLC22A16
BMPR1B
TMEM216
TMSB4Y
SH3KBP1
PLA2G4A
CNOT6
SPDYE7P
CDC42
HIPK3
MTRNR2L1
SYCP2L
MIB1
CYP27A1
RAPGEF4
HCK
MCC
C22orf31
CELA2A
ATG4D
C1orf198
CCDC112
TPM3
NAAA
ZNF438
SLC25A23
CRB3
NPAS1
LTC4S
TMPRSS11A
PIK3R4
NLRP2B
CEP126
SKIDA1
THAP7
LIMS2
ADAMTS5
NGB
UBASH3A
TMPRSS3
TSGA10
C2orf15
APBB2
SETBP1
PMF1-BGLAP
PMF1
SPEG
IFNA1
SGCB
ISG15
AGRN
CDC42EP1
TAPT1
ENOX1
ZNF784
TBC1D21
ARSA
CCNT1
SLC6A11
TMPRSS11F
HPGDS
GSTO2
PDXP
KLK5
ABR
VPS4A
SCAF4
OPALIN
NKX2-5
SLC25A30
FAM178B
ARHGEF3
TAX1BP1
TRAPPC12
NEUROD2
MCCC1
NFAT5
ACTL6B
CXorf38
MICB
BRINP1
TMEM230
INKA2
MAP1LC3A
SOX2
SNX8
NMB
GPM6A
ZNF770
SLC6A16
SAMD14
NGF
TUSC3
EEF1AKMT2
AMBRA1
ABCG8
ABCG5
CREBZF
PSMB2
SORBS2
AQP11
DAGLB
CARHSP1
SZT2
MED8
DNAJC22
PPFIBP2
NSUN5
PF4
C19orf18
SMIM21
C5orf34
CDC34
PLVAP
KLB
INSR
CD1A
TRIM5
TRIM22
TMEM9
SYNE1
ANKRD30A
ZNF221
ZMYM6
GSTA2
PPP2R5A
RGS6
OR6B2
NDUFA10
CD36
VGLL3
SLC25A19
ZNF80
ZHX3
ZASP
SAP25
OR51I2
OR11H2
OPHN1
MAGEA2B
MAGEA2
GTF2H4
DRP2
C1orf127
LYRM4
FARS2
GSG1
ZNF620
SMIM13
OR10J1
NPM2
CPN2
CHN2
TNRC6A
AKT3
MAK16
DENND5B
SERPINB5
SCOC
CCL26
ARHGAP27
ACVR1C
OGFOD2
HORMAD1
SCML1
LAPTM4B
PPP1R14A
SPINT2
PHYHIPL
ATAD3B
SAT1
SNX7
KLK8
PTCH1
TLCD1
NEK8
GALNT7
SLC25A27
RORA
CYP39A1
SCN2B
UNC45B
SNRNP25
POLR3K
IGFBP6
TMCO2
STAU1
NCR3LG1
ZNF367
UCP2
HOXC13
JAG1
ZNF808
ZNF157
TMC5
TM6SF1
PAM
IFNL1
FBLL1
CYP4F2
COL26A1
ACOT1
ANKRD46
ZNF773
RITA1
ISM2
DDX54
CDKL2
SYN3
LRWD1
ALKBH4
SLC39A14
PAX2
LDLRAD4
TCP11L1
DSTYK
CNNM4
ARFGAP2
UMPS
KRT25
HLA-F
DRC1
HHIPL2
TCF12
ODF2
GK
CCDC153
SQSTM1
GUCA1C
FANCI
DRAM1
IGSF10
CDK15
MFAP5
RGL1
UPK3BL2
ANK2
STYXL1
RBM7
C11orf71
SP8
SDR39U1
LENG8
SRSF6
NAT10
UGT2B4
LMTK3
CCM2
EOMES
BMS1
PSMD12
PITRM1
OR52K2
RNF152
ATP2A3
PRDM8
ABAT
GRPEL2
TEX11
ST8SIA5
SMS
SDR42E2
RIOX2
RBMX2
PLP2
PDCD1LG2
MIIP
MAPK8IP2
HPX
GSTM2
CBSL
CBS
CBLL2
CARD14
UNKL
SLC39A5
PNMA8B
DDX58
ZSWIM4
ZNF417
LONP1
CATSPERD
NUP85
NDST2
GDPD1
PSMD4
UBE2K
TBC1D22A
H4C13
H3C11
TRIP12
MSX1
MKRN2OS
SPDYE13
AK4
ZCCHC12
SPDYE9
SPDYE8
SPDYE21
SPDYE15
SPDYE11
SPATA31D3
SHCBP1L
SACS
PDE1B
PDCL2
NR5A1
NLRX1
LIN28A
HSD3B1
GAL3ST2
FAM25G
FAM25C
EIF2AK2
DACT2
CDHR1
CDH23
ANXA8
AMTN
MAPK9
MTRNR2L10
RTL8C
MTRNR2L8
RGPD2
RGPD1
SUPT20HL2
USP36
ARID3B
HEXA
WASHC2A
MTRNR2L2
MSH3
DHFR
ERCC1
LAMP1
DUX4
WASHC2C
AP5Z1
MUC3A
PDGFB
CCDC200
FRG2C
ENTPD4
PRICKLE1
RAE1
SLC4A2
CDK5
SUSD4
MYCL
SHLD2
GLUD1
TM2D2
ADAM9
RALGDS
STAU2
SPATA25
NEURL2
CTSA
UBE3C
MEF2C
TNC
KCNMA1
PASD1
SUMO3
SH3GL1
CHAF1A
GET4
ANKS6
MAGEB10
HM13
DAZAP1
MIER1
SLK
ADGRB3
CLCN7
FGGY
ALG6
MAMDC2
TNNC2
SNX21
MEOX1
SUMO2
SCAMP5
TRIM48
COL23A1
PTBP1
ADAM23
ST7
OTUD7A
KAT5
ARHGAP32
ARID5B
COMMD9
SMARCA4
FRG2
MACC1
FLYWCH1
BLOC1S4
NPEPPS
STRA6
ACVR1B
TBL1X
SLC45A4
SBK1
AP2A2
NSD1
PARD6B
IGLL5
TFDP1
TMCC3
SKIL
GRHL1
PRKCA
SFXN1
RABGAP1L
CORO7
CLSTN1
NR5A2
NSF
EFNA3
SAP30
ANGPTL4
CBX7
FBXL3
ZNF668
SEC22B
MINDY2
CHD7
SMYD1
FASN
UBE2E2
CACNA2D2
SPTAN1
MRPL45
GRIN2D
PLEKHF2
IRF2BP2
SUMF1
NDUFA4
SLC1A7
KDM7A
WBP1L
CELA3B
ZBTB7B
ACTN4
PPP5D1
CALM3
DTNB
PHF21A
CFAP206
CUTC
COX15
NOXO1
GFER
C17orf58
PRKCE
MSS51
KDR
FCHSD2
NFASC
PATZ1
C1QTNF1
MKLN1
IKZF2
AUTS2
PHIP
DIP2A
PTP4A3
IGF1R
PCIF1
LASP1
WDR74
APP
SYNPO
UBXN2A
TEX46
KDM1A
TMEM40
USF2
UPF1
ATXN7L3
CHIC2
TGIF1
OAZ1
ADCY9
CLN3
APOBR
PTPRG
LYPLAL1
TRIL
ATP6V0D1
AGRP
PPARGC1A
LCOR
ETV4
SEPTIN9
BSG
SCGB3A1
LYPLA1
CABIN1
MELK
ZBTB14
ZNF217
IFT140
CRAMP1
CCDC88A
TMEM266
SLC25A11
RNF167
PALLD
MYEOV
PVALEF
AATK
ARHGAP25
SLC35A5
SCYL3
B3GALT5
ATG3
PYCR1
TRMO
PEAK1
HMG20A
USP28
GADD45A
GAB2
EIF4H
MRFAP1
GNB1
PKNOX1
ZBTB18
RYK
TMCC2
THEMIS2
CTBP1
STAT5B
LIFR
PTBP3
MLLT10
FBXL5
NUDT3
TMEM91
CD82
B4GALT2
MDM2
SMURF1
CBX6
C3orf70
FEZ1
NEK6
MAST2
LIMA1
ATOH7
ARPC2
SPRTN
EXOC8
DNPEP
TMEM239
SNX16
C20orf141
PWP2
LOC102724159
ANKZF1
NF2
NFIB
SLC8A3
RABEP1
SUPT7L
SLC4A1AP
RMND1
ARMT1
SNX19
SLC6A6
FBXL22
APBB1
AMMECR1
KLHL41
AVEN
RBKS
BABAM2
BTBD3
NAGPA
EXOC6
HHAT
AMOTL1
ARSG
TENT2
PRMT3
MRGBP
LFNG
RRAGC
ACACA
THAP1
LAMA3
TCTA
RHOA
OPRL1
LKAAEAR1
RALGPS2
CDCA7L
P4HB
SNX12
MYOG
TMEM120B
FHL2
SPNS1
PMM1
UBAP2L
GPSM1
C1orf43
ASF1B
YEATS2
PXN
FZR1
UBXN4
SGPL1
ZC3H7A
SULF1
DOK7
DENND2B
PTPRF
WWP1
VGLL4
SIAH1
TAOK1
ARRDC3
THAP12
GVQW3
AFAP1
NCOA5
UBE2E3
MAZ
ZNF787
MTRNR2L9
LGALS8
GBA
BAX
HAGH
FAHD1
ATP6V0B
ZNF507
PAPSS1
CALML5
PHC2
DUSP6
BCL3
PCBP4
NSD2
MTHFR
CLCN6
UBE2Q1
PSMA1
UXS1
AMDHD2
CHST12
NEURL1
VPS33A
RUFY1
PER1
HP1BP3
TBC1D5
MCOLN1
TSPAN7
SINHCAF
TNRC6B
TCAF2
SYNCRIP
LGALSL
MTMR3
FRMPD1
MRFAP1L1
UPP1
TCF7L2
SEMA3D
LIMK1
GPAT4
DLL3
SRCIN1
FZD3
FBXO16
IFNLR1
C12orf66
BCL2L1
GNA13
CPEB2
LARP1
CLIP1
HSP90AA1
ATF3
TADA2A
SPEN
RBM14-RBM4
RBM14
C15orf61
THUMPD2
PRKAG2
PTK2
UBTF
PDE4DIP
MPP6
MAPK8IP1
LUC7L2
FMC1-LUC7L2
FMC1
POLR2J3
APOC1
VSTM2L
OSTF1
NMRK1
ABCA5
LOC114841035
FKBP2
SSBP4
IFI44L
RXRA
PDIK1L
C10orf95
TNNT1
KLF16
PDS5B
USP2
MAP3K2
ITPK1
ARHGAP28
NBPF6
MCM9
FREM1
ROCK2
CYB5R1
RGS3
HES1
ZAR1L
TNFSF15
LTBP4
BRCA2
DCK
GRAMD4
GNB4
DGKZ
MYL5
MAP4K3
ATP5ME
FOXB2
TRMT2A
RANBP1
CDON
HNRNPU
PPP4R2
BRD4
LRRC20
BAIAP2
THOP1
SGTA
EPHA2
TP53BP2
SPRED2
REST
DENND1A
ASPH
DHX15
FAM81A
GRM3
PRUNE2
NELFCD
SYNPO2L
HNRNPH2
GLA
DLGAP4
PAIP2
MYBPC2
TCHH
HIF1A
ATXN2L
CDRT4
CTNNA2
CDKL5
ATXN7L2
TMCC1
DTNA
ATP6V1G1
MAP4K1
EIF3K
BMI1
PRR7
PDE3B
SPCS3
EZR
FSCN1
CNOT8
BAHCC1
TNK2
MARCHF9
CDK4
METTL9
STBD1
SPAAR
HRCT1
PRKAG3
LARP4B
YTHDF2
SGK3
RUVBL1
EEFSEC
SPAST
SFR1
CXCL8
RAD9A
VOPP1
MAPT
TARBP1
LRIG3
ACTC1
IQSEC1
PPP6R2
LRRC47
SMARCB1
NNAT
FGF6
BLCAP
BCAT1
CEP162
LPIN2
OPN3
CHML
C9orf40
APOA1
RRP1
ZZZ3
MUSK
ABHD2
DAPK1
CHEK1
MADD
NPAS4
MIDEAS
SUZ12
MYO1D
POLE4
ITSN2
SRSF4
DGLUCY
ARHGEF12
RGMB
RAB6A
WDR45B
JMJD1C
KIF1C
KANSL3
INCA1
FER1L5
NEO1
CRYGN
NFRKB
CSNK2A3
INO80C
SLC12A3
PCID2
CUL4A
CCN2
FAM168B
EXOC7
BRD3
MXRA7
LCORL
SYNJ2
RDH5
ITGA7
BLOC1S1
TMEM167B
ATP2B1
ZNF236
MTCL1
ITGB3BP
EFCAB7
EBAG9
ADARB1
PXT1
KCTD20
GTF2I
CAPZA2
ABCC10
XRCC5
SLX4
PTAR1
PPM1A
NDUFV2
LTBP1
ARID5A
EFNA4
RBPJ
NES
LMNB1
SPATS2
DIPK2A
QRICH1
KSR1
CHD1
HDGF
ANKRD29
RARG
MEF2D
IFNAR2
GFRA1
ANKRD26
LHFPL1
SH3PXD2A
RARA
MFSD1
CRTC1
COMMD3-BMI1
COMMD3
NKIRAS1
EVPL
PPP2R3B
TNNI1
SSH1
IKBIP
APAF1
CREB5
HERC5
ZNF718
ZNF595
SRSF11
SF3B1
LRRC40
KLHL8
KLHL32
NAPEPLD
ACOT9
GSTP1
CYP27C1
SOBP
LSMEM1
ASXL2
MYOD1
ZDHHC5
HIGD1C
KDM2A
PACS2
BRF1
THEM4
MPP5
CLDN5
SCAMP4
RIN2
HNRNPD
ADAT3
KLHL30
DRAM2
CEPT1
STX16
PEX10
MATR3
SLURP1
RNF170
HOOK3
RNF187
NNMT
PRKAB2
CHD1L
BCL2L13
SPG21
SLC19A3
POLA2
OPRD1
GPATCH8
PLXNB2
ANP32E
ST8SIA1
RYR1
RFTN1
NBPF4
PPP1R15B
HNRNPA2B1
COL16A1
CBX3
ABCC3
FKBP1A
SNORC
PDZRN3
SBK2
PTPN12
CNN3
CHD3
CBLN1
PPP1R3D
FAM217B
SPRY4
ABLIM1
STRN4
NEDD4
FKRP
EPC2
SLN
DHRS13
CD47
ZSWIM5
MXI1
ZNF318
SRI
NOTCH2NLC