ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5930141 | RH-4
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◣ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

ARID3B
WASHC2A
PDGFB
HEXA
ERCC1
LAMP1
AP5Z1
KCNMA1
TNC
SPATA25
NEURL2
CTSA
WASHC2C
TNNC2
SNX21
STRA6
ARID5B
MACC1
SEC22B
MEOX1
IGLL5
CCDC200
FRG2C
GET4
SLC1A7
SUMF1
KAT5
CLCN7
ANGPTL4
ZNF668
CORO7
COMMD9
MTRNR2L1
WBP1L
CELA3B
TGIF1
MYEOV
SYNPO
CLN3
APOBR
C1QTNF1
TMCC3
RMND1
ARMT1
MSS51
PYCR1
RRAGC
PVALEF
AATK
ENTPD4
GADD45A
ARHGAP25
TRMO
SEMA3D
MTHFR
CLCN6
MTRNR2L2
MSH3
DHFR
VSTM2L
BCL3
MYOG
SLC8A3
FHL2
TMEM120B
VPS33A
TCF7L2
AMDHD2
ZNF507
NAGPA
APOC1
LIMK1
THEMIS2
MTRNR2L8
DOK7
USP2
TMEM91
SLC35A5
ATG3
HAGH
FAHD1
TMCC2
TCAF2
FSCN1
ETV4
PDE4DIP
BAIAP2
PCBP4
TMEM239
C20orf141
PRKAG3
UPP1
SPNS1
SULF1
BAHCC1
SYNPO2L
TBL1X
SMAD7
EZR
MEF2D
BAX
PRUNE2
FRG2
HNRNPH2
GLA
EVPL
NPAS4
ASF1B
MUC3A
ATF3
FGF6
ACTC1
ATP6V0D1
AGRP
CLIP1
CEP162
TBC1D1
CRYGN
IFNAR2
SYNJ2
TINAGL1
KLHL41
UBE2Q1
LRRC47
MYBPC2
TRIL
B3GALT5
DTNA
KLHL30
MXRA7
MARCHF9
CDK4
ABCC3
PER1
SPAAR
HRCT1
TNNT1
CCN2
NUDT14
CYB5R1
SH2D3C
CHST12
TMEM167B
SH3PXD2A
GPSM1
INO80C
SPRY4
NFIB
FREM1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
COL16A1
ACOT9
CD82
ITPK1
EPHA2
FOXB2
NES
PLXNB2
DUX4
MCOLN1
ABLIM1
MYLK2
AFAP1
IZUMO2
INKA2
TBC1D5
CDCA7L
COL23A1
CHD3
NAA38
NR4A1
CYP27C1
ITSN2
SOBP
CNN3
NNMT
PALLD
NR2E3
RDH5
ITGA7
BLOC1S1
CREB5
OPRD1
IGFBP6
NNAT
BLCAP
SOAT2
SLC12A3
UXS1
HHIPL2
ABHD2
ADAMTS1
HES1
RARA
DGLUCY
MFSD1
IQSEC1
NGFR
HOXC13
TNRC6B
MYOD1
SPRED2
RYR1
SERTAD2
HNRNPD
EYA1
TGM2
ARID5A
ATP13A5
LFNG
VPS11
HPS5
GTF2H1
ETS1
TEX46
KDM1A
EXOC7
L1CAM
MINDY2
PALD1
RANGAP1
ENTPD2
TRIM62
GUCA2A
LBH
RFTN1
FAM110A
AMOTL2
INTS12
GSTCD
SMYD1
TRIM55
ZNF609
SKP2
LMBRD2
POLR2M
CCNI
KMT2E
HERC5
TXLNB
SBK2
SCN3B
SMARCD2
ID3
CITED2
PDZRN3
YBX3
TBC1D9
LMCD1
MYCL
SPATC1L
KAZN
ATP6V1C1
SNAI2
TMEM40
LSMEM1
MAST4
TNNI1
SMAD3
OSGEP
APEX1
DUSP5
CDH11
DUSP1
ZAR1L
BRCA2
GRN
KDM3A
NTSR1
WASHC5
NSMCE2
HMX3
TBC1D19
COMMD4
SETD5
CELA3A
DAPK1
HMCN2
ZBTB18
ALDOA
ST3GAL2
MNAT1
PPP1R3D
FAM217B
TNNT2
EPHB2
STBD1
INTS10
KCNF1
PRMT1
FRMD4A
DUSP6
RIN2
NCAM1
ST3GAL5
ITGB3BP
EFCAB7
NUTM2G
SLC2A10
UBE2H
UNKL
ARID1A
TJAP1
ADAM12
SLC4A2
CDK5
MYBPH
TP53AIP1
ATP6V1H
IL32
TRAF4
DERL3
CXXC5
KDSR
S100A2
MYH7
ZNF32
MRPL44
SYNGAP1
CUTA
TCEAL7
DYSF
LACTBL1
TMEM205
RAB3D
CCDC159
SSX2IP
ATP6V1G1
LMF1
ABAT
GLIS2
VGLL4
TCF4
SNRPB2
PIP4P1
WNT10A
FAM240C
MSMO1
SUPT7L
SLC4A1AP
SLC19A3
LTBP1
GLIPR1L1
CAPS2
KANSL3
FER1L5
ABCC10
FUT10
GPX4
MYL4
SLC6A9
GPER1
ANKRD29
IL26
SSTR5
BCL9L
USPL1
HMGB1
MAPRE2
FGF8
C2orf49
ARHGAP24
CFLAR
VASH2
KLHL12
PHLDB2
GXYLT2
CCDC33
RALGDS
TRIM16L
ISLR
SPG21
RERE
TXNIP
IFNLR1
RGS3
GFRA1
LIMCH1
SPATS2L
ARHGEF2
MTF2
PEX3
ADAT2
RBM28
EFNA3
PTP4A3
MARCHF8
SNAI1
RAD9A
GTF2B
SLN
PROSER1
NHLRC3
INMT
KANSL1
EPHA3
PSMD3
CDRT4
SSBP1
NAV2
MAPK10
STYXL2
GPA33
C10orf67
MTRNR2L9
WDR74
RPUSD4
FAM118B
PSEN2
VPS50
HEPACAM2
SECTM1
TOGARAM2
SIX1
SH3GLB2
NDUFA4
C8orf58
METTL7B
SELENOH
MSC
JUNB
SLC25A34
PELO
ITGA1
C2CD2
ATP5IF1
ICE2
PTPRD
CCNG2
ELOVL6
COLEC12
EFNA1
ZNF292
CLDN5
MRPS23
RPP40
OSBPL7
ANKRD12
TTC12
GLS
ARMCX5-GPRASP2
ARMCX5
LRP5
PLAU
TBC1D30
GNS
FLNB
SUGCT
MPLKIP
LURAP1L
MGP
CHMP2B
MUSTN1
ITIH4
TPP1
NFIA
ZNF775
SEPTIN9
ILF3
SHB
RNASEK
HMGCS1
DES
C17orf49
RBPJ
CALM2
IRF2BPL
CRACR2A
TACR3
RDH8
COL5A3
LAMA3
HES6
MTRF1L
RAI14
LTBP4
PPP6R1
FOSB
MC2R
DDX20
TCAP
PNMT
SLC22A8
ECH1
PTGIS
ALLC
LOXL4
MDM2
E2F6
PAFAH2
NAGLU
TBPL1
RHOF
RCBTB1
PMEPA1
SH3BP4
PLEKHD1
ZBTB40
TBKBP1
STMN1
BMF
BIN1
GKN1
BORCS7
MYLK4
CRBN
RASSF4
IRF9
SNX16
THOC1
OCLN
IPP
ACHE
BHLHE40
NOXO1
GFER
NUTM2F
CDC42EP3
AZIN1
TSR3
GNPTG
FAM120B
DLL1
C5orf51
GAA
AMPD3
PTK6
SYTL3
CLMN
SSBP2
LSP1
CGGBP1
C3orf38
COMMD2
UTP18
RBSN
MBTD1
IRF7
LOXL1
SRSF7
ELOVL3
CLTCL1
ATP8A1
ARFGEF2
RASGRP3
MAMSTR
WWOX
CDK5RAP1
SYNE3
LSM12
G6PC3
WSCD1
PKM
AASDH
ZNF217
ZNF92
UVRAG
RGS9BP
MLXIPL
ANKRD27
ZBTB7B
BCAT1
CORO2A
FZD1
ADNP
VGLL3
HIF3A
NUP107
CXorf65
SMOC1
CTHRC1
METTL9
OTUD7B
ANKRD1
COPS4
ACKR3
TOR1AIP2
TOR1AIP1
TSC1
PELATON
PDLIM7
GFI1B
DRD2
SREBF1
RPS7
VTA1
NMBR
NOTCH2
ZP3
SLC24A1
STING1
PHF23
DVL2
SH2B1
SHPK
CTNS
CHRNA1
TMEM210
LRRC26
MAP3K7CL
LPCAT1
PSIP1
GTF2A1
NFE2L2
C20orf204
MTFR2
LRP5L
TTC9
DGKB
APP
KDM4C
TANK
LZTS2
CAPN2
ARSG
GRAMD4
MIDEAS
HPCAL1
USP15
SAV1
CSNK2A3
YARS1
S100PBP
TBX2
NBPF26
NBPF19
NBPF14
SYT7
RPL27
TTC26
NACA
SYNRG
RTN2
RBMXL1
MFAP4
KYAT3
HSPB7
CLCNKA
MADD
ATP2A3
RAB11B
HMOX1
AKR1B15
SLC1A5
PUM3
RARB
OLFML2A
TSPAN33
TRIM72
PYDC1
ELAC2
NDUFV2
DPYD
RAD21
NRAS
MCAM
SPATA9
RHOBTB3
KYAT1
NBPF1
KLF12
IGFBP5
HRH1
DYRK1B
SVIL
WHAMM
FSD2
FBN3
SLF2
KIAA0754
UBC
DUSP10
ST7
USP30
MTBP
MRPL13
ANKRD40
NUF2
TNFRSF19
RAB5B
TEDDM1
IMPACT
TMEM100
NEBL
LRRC75A
NEXN
MDFI
IL21R
FRMD3
ENKUR
EIF5AL1
CPA1
COL9A2
BTG2
CCDC107
ALOX5AP
AAAS
IRF2BP2
ARL14EP
ANKK1
HS1BP3
WDR11
COX16
PFDN4
MRPS31
ZBTB26
RAMP1
THAP10
LRRC49
GSPT1
RPS12
PRR5-ARHGAP8
PRR5
NDST1
EN2
FGF16
LRRC17
TM9SF4
ZNF654
ZNF572
SOX8
PBX3
MRPL34
DRG2
DNAJC25-GNG10
DNAJC25
DEPTOR
DDA1
ABHD8
KAT6A
MYL12A
ACVR1
RTTN
KDM6B
CCDC88A
B4GALT2
ATP6V0B
KDM8
SLC38A8
POMZP3
SUN1
ATP2A1
TMEM233
NAV1
IKBKG
G6PD
DPH2
NKIRAS1
NR1D2
CMTM2
NME1
TEX36
COL20A1
HMGA2
TARS2
TESPA1
KIAA0895
BRF2
B3GNT8
ANLN
JMJD1C
IFFO1
MTERF1
TMEM190
WBP4
STAT3
IL11
GOSR2
ELF1
RGMB
ZNF335
PPP1R15A
NOP53
LMOD1
C1orf198
PRKAG2
MYO18A
ASB18
MSL2
CAV3
TRPM4
HRC
GPRC5A
ZCCHC4
SLC7A5
KLF7
HLF
MAST2
FAM107A
ABR
CHMP1B
TMEM242
SPACA6
SNRPB
RHOQ
RBM25
ATP6V1E2
STX16
HDAC9
SYTL2
NBL1
RHOJ
METTL15
KIF18A
MCM6
CSRP3
GBA
CCNO
PBK
SQSTM1
ARMC8
TEFM
AIFM1
CDK6
TNFRSF1B
PRRT1B
KLHL32
ELAPOR2
TRIM47
SLC33A1
NDUFAF4
RIMS4
GBX2
PLEKHM3
TOP3A
SMCR8
TSFM
FAM185A
ATR
VPS13B
WBP1
SETD3
INO80B
CCNK
NAPA
CBWD5
CBWD3
JAG1
MMADHC
RPL5
CBWD6
WDR75
IER3
FLOT1
CDON
SH2D7
SATB1
HSPB1
PLSCR1
DCLRE1B
AP4B1
TNFRSF12A
THOC6
RPN2
RBL1
MROH8
HCFC1R1
FGD3
DRD4
CLDN6
MTHFD2L
ARID2
SF3A3
STON1-GTF2A1L
MYRFL
METRNL
CASZ1
MTNR1A
TMEM238
ZSCAN30
ZCCHC3
TERF1
TBL1XR1
PIKFYVE
FIS1
CSK
CLDN15
BBC3
AXL
BCL2L1
THAP5
DNAJB9
MPHOSPH10
MCEE
RUSC2
PTF1A
PSMB7
MEMO1
MYL5
ATP5ME
PNKD
MTMR14
PCNX4
EPM2A
POLDIP3
SPATA13
BET1
ARHGEF6
PTK2
CCDC34
CPT1A
SYS1
TBC1D8
SCARB1
RFLNA
PPP5C
LAMTOR1
CLK1
NPEPL1
VMP1
PTRH2
DMAP1
DDX1
COMMD8
RUNX1
PLAAT5
PRDX6
TNFSF15
TRIOBP
SLC9A3R2
POLR1F
NSUN4
KCTD9
H2AZ1
DNAJB14
COL12A1
CDCA2
LRRC58
RFC1
LEFTY1
CDKN1A
FMO1
SEMA6A
IRAK1BP1
CUEDC1
RRAD
SULF2
SLC25A32
DCAF13
USP37
THRAP3
NLK
FOS
CNOT9
CBLL1
ARL8B
HELB
MTREX
DHX29
RBM39
KLHDC10
AIG1
MYL6B
MYL6
CRNKL1
CFAP61
EIF2B3
WDR36
SAMD11
RAB3IL1
LRTM1
INA
GTF2H2C_2
GTF2H2C
FLCN
PTDSS2
SGIP1
TRIB3
SLC1A4
RBM24
OBSL1
NRG1
INHA
BDKRB2
ANO9
ACSL3
SERINC2
PLS1
SDHD
RCAN1
OSBPL9
HIVEP2
NEURL1
HBS1L
PSME1
FITM1
USP47
SLC49A4
MRPS5
MFAP3L
ID1
HSPBAP1
EML2
CXCL3
CALD1
LRIG3
FAM200B
SCT