ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX026268 | Caco-2
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◣ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◢ SRX748420: HCT 116

◢ SRX748425: HCT 116

◢ SRX748426: HCT 116

◢ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX150698: Hep G2

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX702028: hESC HUES64

◢ ERX159250: LoVo

◢ ERX159251: LoVo

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

PAOX
PHF12
SLC7A7
CSTF1
AURKA
PLEKHG6
MIA2
PDXP
MVP
SELENOP
PRAP1
PKP4
HNF1A
KRTAP5-7
SLCO2B1
VIL1
SCAF11
PANK1
RPS7
POLD4
C11orf24
ACY3
CYP17A1
LBX2
CLPB
RNPEP
EIF6
PCYT2
APOC3
SCNM1
LYSMD1
ZNF567
CACNB2
IYD
MMADHC
GPR35
CCDC90B
RAB37
NUDT13
TCIRG1
DENND2B
ADAP1
F10
UNK
SHISA5
STARD4
CDK5RAP1
ANKRD40CL
NR1I3
SLC45A4
ABLIM1
AP2S1
AQP11
F7
NEK2
KIF21A
TMEM115
IL32
SMAGP
ZNF225
PEPD
LGALS2
MMACHC
CIDEC
RBKS
BABAM2
TMPRSS4
DIP2C-AS1
LRRC29
NOSTRIN
ACOT7
CDC14B
SDHAF1
ACOX2
CREB3L3
TATDN3
NSL1
FCHO2
ACSS2
FDX1
NR0B2
BTNL8
PABPN1
SOS1
MYADM
TMBIM1
KLC4
MRPL2
CWC25
IDH1
EPS8L3
APOB
ZNF529
WDR36
EMP1
PINK1
HNMT
HAAO
BANP
TCEA2
TFPT
PRPF31
CTU1
MEP1A
PHB
HGD
AHSG
TSNAXIP1
RANBP10
TECR
DNAJB1
GNG4
NDUFS3
KBTBD4
ATXN7L1
ACY1
GSDMB
RAB17
BRCA1
FASTKD1
ANK3
NEURL2
CTSA
VAMP5
PEX11G
SLC19A3
AJUBA
WNK4
H4C3
ZNF165
ALPI
DNAJC22
ST3GAL6
STX16
NDUFA6
SEC16B
METTL7B
BCL9L
RSPRY1
JMJD1C
MRPL44
SOCS5
TRAF4
SMG8
DYNC1I2
C19orf53
TMEM140
ZNF112
CYB5R3
WDR46
PFDN6
ORC2
DHRS11
WNK1
KNL1
IFRD2
OTULIN
BLCAP
AKR1C4
ZNF223
SEH1L
MCRIP1
SSTR1
IFNGR1
UMPS
MAP3K11
SH3BGRL2
GUCY2C
ZFYVE27
AHCY
APOBEC1
HEPACAM
PLXNB2
BOD1
MRPL24
INVS
ERP44
ANKS4B
MRPL20
KBTBD6
DHRS3
CCDC146
MBNL2
ECI1
CLDN4
MYO1A
HSD17B11
CCR1
ZNF226
INHBE
DDX23
BORCS7
SLC22A9
BOLA1
STK31
COX7C
AGMAT
TRIP4
ZNF512B
MUC13
MED15
NR1D1
RDH5
ZNF230
EIF3F
DECR2
OPA3
DOK4
TACO1
PAAF1
COA4
AMACR
SUCLA2
TMEM254
AXL
DSTYK
IST1
DNASE1
PUS10
PEX13
TDP2
ACOT13
TTC31
CCDC142
DFFA
SMG5
TMTC3
CEP290
PPRC1
TBCCD1
XYLB
SEC23A
MOGAT3
SH3D19
COX16
RBBP5
FAM149B1
ECD
SLC51B
IFTAP
AHCYL2
AIFM2
RPL34
BMS1
SPRY4
WDR74
ZNF155
TMEM181
MGST2
TMEM139
CHMP4B
ESRRA
TFEC
PPIP5K2
GFM1
TNS3
TNFRSF10B
FAM168A
GPR137
EDEM2
PRKCSH
CCDC151
DDC
TM9SF4
ARHGDIB
TM4SF5
MTMR4
NDUFC2-KCTD14
NDUFC2
MTIF2
MLF2
TMEM101
SIAE
VTN
SMPD3
POLDIP3
NUP107
WHAMM
COPS4
SLC28A1
RAB32
SNX17
EIF2B4
CCDC107
GOLGA6L2
SNAP47
JMJD4
CDIP1
WDR24
IGSF23
BLOC1S5
TNFAIP1
IFT20
TOMM22
DMXL1
SLC39A5
TRIM14
PAFAH2
PRCC
IFIT3
SMLR1
ZSCAN22
RPS6KB2
CLIC1
RPGRIP1L
FTO
ALG10
ABCC2
AAR2
ZFYVE1
CNOT2
FBXL19
CLRN3
PPP1R12C
IQANK1
FAM83H
SOAT2
CTSB
MRPL21
IGHMBP2
CRTC2
GSTO1
WASHC2A
USP48
NR1H2
CBLC
CYP4F3
ZBTB45
MAF
C1orf210
NUF2
TK1
AFMID
RALGPS1
CISD1
TMEM177
GDF15
PCK1
SNRPB2
TMEM92
SLC22A18
ZNF17
MFRP
C1QTNF5
PDZK1
ZNF205
EHBP1
SSBP1
GNAL
ALG10B
RTEL1
PERP
C4BPB
SMYD5
CCDC93
SPATA2
NODAL
POM121
NPRL2
CYB561D2
BIRC2
SKIV2L
NELFE
SELENOI
ADGRF3
ZNF232
ZNF384
ZNF219
AGT
DUSP15
AATK
ELOC
INTS4
LSM14A
HBP1
MMP15
RBM33
MRPS16
ZNF235
IQSEC3
TUT1
FYB2
NUFIP1
GPALPP1
DUSP18
TBC1D23
ZNF564
UNC5B
INTS9
HMBOX1
QPRT
STK24
RPL12
LRSAM1
MIA3
ATXN2
FEM1A
FRA10AC1
SDHD
PHF14
N4BP2
B4GALT4
GAB1
KMT5A
GALM
SUPV3L1
ZNF461
DNMT3A
NID1
CRK
TAOK3
DUS2
DDX28
TOR1AIP1
TRIM40
TMEM256
ALAS1
ABCC6
PLA2G12B
NPAS4
ZNF487
PPP1R12B
SURF4
ZNF320
CRNKL1
CFAP61
BMF
CMC1
IDH3B
PALM2AKAP2
HSP90B1
CPHXL
C11orf49
SLC17A5
PRR5
ZFP91
LPXN
CHKA
ZSWIM3
ACOT8
MYO7B
HNF4A
HRCT1
COMT
BUB1B
ZNF628
TCOF1
SLC30A4
CSTF2T
CRBN
HADHB
HADHA
GID8
DIDO1
VIPAS39
AHSA1
BPHL
MRPL40
HIRA
NOP16
HIGD2A
UPB1
PPIL2
MRPL48
ZNF354A
SAR1B
TJP3
SCP2
LIN37
ZNF419
ZNF211
SYMPK
FOXA3
KAT7
NDUFA2
IK
CYP27A1
RHOBTB2
VPS25
HPS5
GTF2H1
AMN
DEAF1
ZNF444
KDM4D
CWC15
SLC10A5
ZNF343
LIF
CBS
RFPL2
CES1
PRRG2
NOSIP
RPS3A
AKAP1
ENGASE
MAPKAPK5
TMEM71
PHF20L1
ZNF749
LARS1
HSD17B14
GSDMD
MLEC
ZNF140
HSPH1
LEKR1
ZNF354B
CLNS1A
TOMM40
ANKRD26
HDHD3
KRR1
SLC23A3
BAIAP2L2
SOX30
C5orf52
VPS50
HEPACAM2
METRNL
NR5A2
SEPSECS
H4C8
FSTL3
APOA2
WDPCP
MDH1
EIF1AD
BANF1
TOMM70
LNP1
COPS7A
USP30
EIF2S2
DENND5B
SPHK2
RPL18
RAB1A
BCL7B
S100A16
CCNL1
IMP3
ANXA9
PARD3B
SLC25A16
NEDD8-MDP1
NEDD8
GMPR2
GSK3A
PRR13
MRPS31
SDCBP2
MARK2
FAAP20
WASHC2C
MS4A10
KRTAP5-4
SORT1
FUT2
TRIM15
PTK2B
TREH
SRC
SUFU
ACTR1A
UBA6
CCR6
DPPA4
KDM5A
CCDC77
ATXN7
TWF2
TMEM230
ZC3HC1
CDHR5
ALKBH7
NME1
IRF5
ZNF224
HSPE1-MOB4
HSPE1
HSPD1
GPR132
RAB11FIP3
NRBF2
RNF121
LOC100133315
RPIA
CD86
CNKSR3
EMSY
PHB2
GATB
TBL3
ALKBH8
MAN2C1
CRYGC
NSUN5
PI3
KBTBD7
VPS28
RAB30
PEMT
SARDH
CALML4
TEFM
MRPL11
DNM1L
RABAC1
COASY
SELENOH
SSNA1
ANAPC2
GRWD1
SPATS2L
CSRP1
CAND1
ATP11C
ZNF668
ZNF646
MARS1
ARHGAP9
MRPL16
INO80B
METTL8
DCAF17
ALDH3B1
ST3GAL2
CUBN
VCPIP1
C8orf44-SGK3
STAT3
ZC3H10
ATP5MC3
ZNF57
DCDC1
SULT1C2
GEMIN6
MICOS13
HSD11B1L
MYL12B
MIEF1
TMEM144
COMMD3-BMI1
COMMD3
TSSC4
NCKAP5
RNASEH2C
UBA5
NUDCD1
ZNF181
TMEM86B
DUS3L
RARS1
GDI2
MGAT1
APOM
RBM39
NOC4L
DDX51
RPLP2
SEC22B
SSUH2
MTMR9
ARNT
GMPPA
BOD1L1
OSCAR
NDUFA3
C12orf43
TLDC2
KCNK10
STYXL1
MDH2
PSMB6
AQP10
NDUFS1
EEF1B2
IQCN
RBM42
MT1F
TMEM150A
RAP1GAP
OPA1
CCDC174
WIPF1
PWP1
LRIG2
SYNJ2BP-COX16
SYNJ2BP
SNRPA
C11orf86
ZNF221
ISY1-RAB43
ISY1
SLC35A3
C15orf39
POLK
CERT1
KATNB1
SCAND1
MRPL30
MITD1
A1CF
EIF3D
PJA2
GFER
INTS12
GSTCD
NR2F2
IPO4
H4C12
ABCF2-H2BE1
ABCF2
BTRC
LMTK3
NAT10
PACSIN2
DNAJC11
RBP2
PYROXD1
MAP1LC3B2
ZNF485
WFDC3
DNTTIP1
C17orf75
ADD3
SHANK2
OAS1
RBSN
CTNNBL1
AGPAT3
TXNDC9
EIF5B
TANK
ADGRG7
NR1H3
ACP2
ZNF37A
RPL6
TPR
ODR4
ACAP3
TTC12
MRPS34
EME2
TMEM184A
KMT5B
ZNF214
NLRP14
HINT2
DLC1
DCAF6
HSD17B4
JRK
SOD2
MAP4K5
ATL1
KRT8
SENP1
PFKM
NUP153
TOMM7
AP2B1
TTI1
RPRD1B
UBQLN4
LAMTOR2
HOXA3
SMIM11B
SMIM11A
RBM6
DHRS12
TMEM199
POLDIP2
TRMT2A
RANBP1
TRUB1
OBI1
STAU1
ZNF420
PHF7
BAP1
ZFYVE19
DNAJC17
CIAO2A
DPM3
U2SURP
SF3B6
FAM228B
ZNF2
HMGCS1
PNPO
GDPGP1
CIB1
GTF2H4
TRAK1
ZNF764
KMT2D
SEMA4G
F2
SLC25A45
NIPAL1
CNGA1
CCL15
PRRG4
TASOR2
EDN3
CRADD
RAVER1
SUPT7L
SLC4A1AP
PALM3
UTP14C
PATZ1
ZNF805
SLC34A3
ZMAT2
LOC100129484
ZC3H12D
TOGARAM1
KLHL28
CAMSAP3
PLEC
GFM2
MRPL53
PRDM10
TP53I3
ABCC9
TMEM11
ACSL5
CHCHD2
EXD2
LYZL6
PKLR
GSTK1
CD99
HTRA2
MRPL3
ZKSCAN4
ACP6
APBB1
PGPEP1
MAIP1
NOL7
RPS6KA1
RPS13
ZNF23
RPL29
KLHL20
SHROOM1
SRSF4
CST5
LRRC59
TIMM13
CIAO3
ARPIN-AP3S2
ARPIN
TMCO1
RCAN1
TMEM245
PAK4
GUCA2A
ARSF
NDUFAF5
ESF1
HNF1B
ZNF26
CWF19L2
WDR87
SIPA1L3
CALR3
C19orf44
C16orf91
PLEKHG1
ASAH1
TOB2
ZNF234
ZNF56
POLR2H
SP2
ATP5F1D
TSC2
NTHL1
LTBP3
SLC2A8
TOP3B
ZNF417
NQO2
CFB
SCO2
GTF2H3
EIF2B1
TIMM23B
PARG
FRMPD1
CPPED1
GRTP1
AIG1
TMEM242
PNKD
ZSCAN25
HNRNPA1L2
JPH2
AAMP
SLC41A2
GAB2
ID1
CWC22
MRPL12
THAP11
RPS28
NDUFA7
PSMA5
MNAT1
CXCL2
POLR3F
DZANK1
PSMD11
DYRK2
DHX35
CDK12
GGNBP2
SLC4A2
ING4
CDK5
NRL
DCAF11
SLC30A1
ZNF337
ZNF551
AMOTL2
UFD1
CDC45
SNX7
TRIM31
MYL3
NCEH1
ZNF879
CYP2S1
UBR4
TAF11
SLC35B4
MST1
ASGR2
MPND
PTGR2
MAPK6
RPS26
PPP2R5B
TARS2
MRPS22
RBM8A
GALK2
COPS2
ZNF827
DCLRE1C
BAZ1B
DLAT
NDUFA9
AKAP3
NUCB1
ZUP1
CIC
SLC31A1
FKBP15
C11orf52
ZW10
NOS2
CEP43
UTP3
CCP110
NTAN1
SLC7A9
TIMM23
HK1
NUP54
ZNF473
VRK3
FYCO1
AGFG2
ZMAT1
BRPF3
TTC33
RACGAP1
PSENEN
ERAL1
FGFR4
MYO1E
RPS19
RHBDD1
IRS1
OSBP2
MFAP4
SOWAHD
USP8
TLCD2
SERPINB6
DUS4L-BCAP29