ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX748433 | HCT 116
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◢ SRX748420: HCT 116

◢ SRX748425: HCT 116

◢ SRX748426: HCT 116

◣ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX150698: Hep G2

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX702028: hESC HUES64

◢ ERX159250: LoVo

◢ ERX159251: LoVo

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

MIA2
SKIV2L
NELFE
CCDC107
DEAF1
EPS8L2
NR1I3
HRCT1
ATXN7L1
PHF12
CYP17A1
NDUFS1
EEF1B2
SFRP5
MAP3K11
CSTF1
AURKA
C11orf86
MTRNR2L8
SCARB1
RAB17
ROCK2
CLCF1
ALDH2
NEK2
ACY1
PPP1R12B
S100A16
RAD50
VGLL4
IST1
CSNK1A1
GNAL
CREB3L3
ZC3H12D
SHTN1
MTRNR2L2
SLC41A2
SH3D19
LBX2
NGRN
C19orf12
CD86
CCDC90B
PEX11G
SH3D21
ZNF764
SCAF11
C1orf174
RTL10
GNB1L
USP37
CNOT9
INTS4
MPND
GAB1
RBKS
BABAM2
TJP3
TTC31
TNFRSF10B
PIM3
MIIP
SELENOP
PGLYRP2
PRMT2
KNL1
GUCA2A
KRTAP5-7
ERCC6L
TINAGL1
DCLK1
TDP2
ACOT13
CCDC142
SEC23A
APOA1
ARNT
CLRN3
MAP4K5
ATL1
PTS
INTS9
HMBOX1
BTBD19
TCTEX1D4
RFFL
PEPD
KPNA7
PRKCSH
CCDC151
C10orf90
CDC14B
UBE2R2
CEP152
PRR3
GNL1
SECTM1
NOSTRIN
MIDN
IDH1
PPIP5K2
MIA3
SF1
BRCA1
AWAT1
DKK1
LGALS1
PCYT1A
MMACHC
GPR137
MSH5
RGPD2
RGPD1
DHRS3
MVP
PPP1R37
SLC19A3
TMCO1
TOGARAM1
KLHL28
SMARCD2
ZNF696
HERC5
SLC7A5
EIF4E
PABPN1
SLC39A6
ELP2
TMEM82
RPS3A
RBIS
DENND1B
LRP1
POLRMT
ACOX2
KMT5A
ARPIN-AP3S2
ARPIN
SH3BGRL2
SYT12
METTL7B
ABLIM1
SLC38A10
SHPK
CTNS
MSLN
COPS4
RCAN1
DKK4
SFT2D3
PDXP
IQCN
MLLT10
CALML4
MCRIP1
PPP1R27
MAP2K3
FCHO2
NQO2
CPHXL
HINT2
YAP1
JUND
BIRC2
OCIAD2
C11orf24
SH2D5
SAXO1
RRAGA
PLEKHJ1
LOC100129484
SLF1
KIAA0825
DENND5B
TTI2
FASTKD1
PANK1
MBNL2
WDR81
CD2BP2
PRDM10
CIDEC
UBA6
ACSL5
PHACTR4
VTN
PIKFYVE
DHRS7B
SDC1
CLASP1
PACSIN2
ABHD2
PYGL
PITPNM1
SNRPF
PPID
PRXL2A
COQ5
RAB34
SLC25A24
GOLGA4
STX18
MFAP4
MLF2
SHISA5
PJA2
SEC16B
MRPS28
TAGLN2
LHB
TMOD1
IL32
MXD3
SOS1
OCIAD1
C19orf33
CREBRF
GNPDA1
SESTD1
PYY
NAGS
TMEM120A
TAOK3
FBXW5
C8G
PRDX6
SEH1L
CRPPA
TBP
PSMB1
PRR7
BLCAP
PPIH
CCDC186
SH3BP5L
IQSEC2
CHCHD2
BEGAIN
PAQR4
IBTK
SHF
ADM
FAM185A
SEMA3B
PRAP1
SLC25A28
RPL27
SRSF4
FLVCR2
SPINT2
DAPP1
MTMR4
NLRP3
BORCS7
PPM1D
SMYD5
STK11IP
EPS8L3
STN1
PGAP3
ERBB2
C9orf85
ABHD17B
ALDH3A2
TBC1D22A
COMT
NUP107
ALDH3B1
CNOT6
ARHGAP12
TIRAP
RPL41
GUCA2B
GPT
NAT2
RABGGTB
SF3B5
RAB37
SMAGP
SLC26A6
ARSB
CMPK1
POT1
MAFG
CCDC200
DENND2B
APOBEC1
ARPP19
IGSF23
ERICH4
RNF212B
SNRPA
C19orf54
PMS2
AIMP2
POLR2H
SELENOI
ADGRF3
PWP1
PPP2R5B
MRPS30
HMOX1
POLDIP3
PHF5A
ACO2
SRSF11
LRRC40
SLC36A1
KDM3A
NFXL1
ATP5MF-PTCD1
ATP5MF
ZNF225
MXRA7
KLK6
MRPS7
GGA3
PTGR2
PPP1R9B
HNRNPH1
BCL9L
ZMAT1
SLC2A14
VPS54
TOMM70
LNP1
ZNF565
ZNF146
SLC25A5
CAPN2
ZNF564
KIF16B
PDE11A
TMEM254
SRSF5
TRIM14
ZNF512B
BPHL
RASSF5
FHDC1
TRIM15
BAZ1B
NOP9
DHRS1
CDC25A
CMC1
SLC26A1
ETV4
NR1D1
VMP1
PTRH2
LINS1
ASB7
EMP1
PSMA5
KRT8
RAB30
DLX2
SP2
RTN4
U2SURP
CEP128
CEP135
PHF14
ETFA
RDH5
GOLGA8B
GPR108
USP16
INVS
ERP44
OGA
GSDMD
TOMM40
HDHD5
TBX1
EHD2
ATXN2
SESN1
CEP57L1
NRL
DCAF11
G6PC2
MTHFD1L
AMACR
FZD5
CLNS1A
MMADHC
KIFC3
BAAT
SAXO2
EFL1
NCSTN
COPA
NUDCD1
NMT1
DCAKD
ARHGAP45
AGPAT1
RNF5
MIGA1
MGST2
CYB5R3
MED20
BYSL
MTFR2
SHFL
ASAH1
DCLRE1C
ASF1B
PERP
VTA1
NMBR
RNPEP
GPCPD1
ISCA1
NQO1
ZNF708
PINK1
NPTN
GPANK1
NAP1L4
CSNK2B
ADGRA3
RTKN
CISD3
FDXACB1
C11orf1
MAN2C1
SERPINA1
RNF121
LOC100133315
RBM8A
VAMP5
TTI1
RPRD1B
TMEM94
TPT1
BHLHA15
SLC35A2
LRIG2
APOA2
ADPRHL1
ACY3
NIBAN2
ST3GAL6
PACS1
ZNF230
C3orf52
RFT1
WDR74
OGFOD2
AURKB
MAP1LC3B2
ADAR
CLPP
IL13RA1
CLPX
SLC50A1
HDHD3
RPL34
PPP1R15B
ZNF286A
XBP1
KCNMA1
BLOC1S5
ALKBH7
LEKR1
LRRC6
QTRT2
CCDC191
RPGRIP1L
FTO
TACC2
RPLP2
OLFM2
GMPPA
PDSS2
GPR107
ZBTB43
PTPRG
TTC14
SASH1
GGCX
PDE4C
TCAF1
HSD17B11
TMEM71
PHF20L1
RMND1
ARMT1
PGM1
ANKRD40CL
CYCS
LRP10
KIF21A
ALG14
MRPL24
CCR7
PI4K2B
ELK4
SLC5A11
STK19
DXO
RPS27A
CLHC1
OPA3
NADK
PPFIA3
C19orf73
SOD2
OTULIN
GFM1
IFNGR1
CLDN4
RPS15
CEP85
HPS5
GTF2H1
TCP1
MRPL18
ZNF747
ABCC2
AMT
RRAS
CCNI
VPS26B
NCAPD3
FDX1
PRKCI
SDHD
CTH
DLST
WDR36
RPS6KA1
KRTAP5-10
RASL10B
HNMT
TRAF4
ASXL1
ARHGAP10
CD68
PPIL2
FYB2
NDRG1
RB1CC1
H4C3
DNAJC14
AGTRAP
LLPH
BCL2L15
HBP1
CDK11B
CDK11A
ISL2
PPME1
C2CD3
HSD3B1
SLC28A1
ISG20
RNF125
TUFT1
TMCC3
ZNF827
LAPTM4A
LAMA3
SLC16A5
MCC
MSANTD3
GDF15
CRADD
GMNN
CXCL9
PPP1R3D
FAM217B
RBM33
SLC25A45
SENP3
SCOC
ZDHHC9
C11orf52
NAT1
CDH3
TXNRD1
ZNF184
DLG4
ACADVL
RBM7
C11orf71
ARHGEF2
FAM136A
LDAH
NUP62
IL4I1
ATF5
NAA80
HYAL3
BTNL3
NBPF15
KATNB1
NFE2L2
TBC1D23
TTC12
RBMXL1
KYAT3
BET1
MCM3
NR2F1
TMEM102
LOC100289561
EPHX2
PDGFB
TRIM6-TRIM34
TRIM6
MOV10L1
ZSWIM8
ESCO2
ACIN1
C14orf119
KCNJ11
LARP1
TBCCD1
MT1F
DNAJB11
ABCD4
POLR1H
DCTPP1
CRK
DRG2
PSMB3
SMARCE1
WDR43
UFSP1
PMVK
RSPH14
PRAG1
TIGD4
ARFIP1
UXT
CLDN19
ACSL1
AP1M1
HNRNPD
LOC101928841
UBR4
SLC35A3
SMIM29
LMNB1
HEPH
CDC14A
ANKRD13A
CCNL1
TRPC4AP
CAPS2
MICAL1
TREH
ATAT1
SULT1A4
SULT1A3
CFAP299
NME1
ZNF181
TEN1
ACOX1
MGAT1
ZBTB8OS
RBBP4
HPCAL1
ECSIT
CRNKL1
CFAP61
SUOX
ZNF687
RABGAP1L
MAP1LC3C
ZNF219
HSPE1-MOB4
HSPE1
HSPD1
MTRNR2L9
ATP5MC3
UFD1
CDC45
CCNG1
GPKOW
SLC39A7
RXRB
GABARAPL1
SLC2A8
RPS19
EMC4
AQP3
MTIF2
PARP4
VWA7
PEX6
JMJD1C
RBM25
BAZ2A
C15orf39
RTN4RL2
TMEM256
SHBG
SAT2
CLDN2
PUS10
PEX13
MIEF1
TTC39C
NT5DC1
EPN2
ATP8B3
BRIP1
TIAL1
GULP1
TANK
GFER
TRIP12
FBXO36
WBP1L
AXL
FAM169A
POC1A
STARD5
SLC39A4
FAM162A
CCDC58
TMC4
PEX2
RNF114
GOT1
CTNNA1
STAMBPL1
KATNBL1
ALCAM
TGFBRAP1
RBSN
EDN3
HMCN1
LAMTOR5
DDX41
OSBPL7
ZC3H18
SLC26A11
C2orf78
FZR1
FDPS
PEX16
SS18L2
DAP
C12orf57
DNTTIP2
DEPDC7
UBA5
SPATA12
LBHD1
IFT88
UFL1
SNRPB
AIFM2
NIP7
COG8
HDAC7
PEBP1
CCNT1
DUSP3
NSMCE3
MAT2B
ZNF548
TYMSOS
TYMS
BCL7B
PC
ZNF41
XPNPEP3
ST13
SF3B6
FAM228B
NPC1
TIMMDC1
SEC24C
SCARA5
CYBA
ZNF639
TIPRL
PFDN4
FBXL19
PHLPP1
PRR5
RIN1
CYB5B
MGAT4B
UGGT2
PNKD
STK40
SPRED2
ETS2
NDUFA6
UMPS
GANAB
NCEH1
RRNAD1
ISG20L2
PRCP
DDIAS
MRPL42
YOD1
SERF2
C11orf91
DAGLB
ATF4
ABHD16A
GLRX
EPS15
MAOB
DQX1
DNPEP
GM2A
ACADM
NHLRC2
DCLRE1A
PIPOX
YEATS4
PKMYT1
TBC1D31
MRPS22
SMAD7
CBY3
TACO1
MYL12B
NUFIP1
GPALPP1
EIF4EBP3
PTP4A1
PRELID2
LETMD1
SUCO
LYPD1
SEPTIN9
EMSY
EFNA2
DCTN2
ING1
TMEM53
ARMH1
PYROXD1
STAT6
ZNF346
CCDC71L
HTRA2
IMMT
HMGA2
ASB9
BOD1
RFX2
ABCF3
POMGNT1
TMEM9
MTRF1L
SKA2
PRR11
PSMD10
PKD1L2
ATG4A
PAK4
PTK2B
AK3
TRIM35
UBE4A
GSK3A
GTF3C2
RPF2
DAXX
PRICKLE1
SCNM1
LYSMD1
CCDC71
BSDC1
GLT8D1
NOP16
HIGD2A
ARHGDIB
MUS81
TTC6
FOXA1
CPA4
SLCO2B1
PLSCR1
NELFB
SCP2
SECISBP2
TMEM218
TRIB1
AP3B1
FOSL2
UCN2
FAM221B
INHBE
MSANTD4
BCR
TECR
DNAJB1
BOLA1
RTBDN
MS4A10
BZW2
TAF6L
EIF2AK3
GCDH
UPF3B
IL4R
FOS
H4C8
USP42
ARL4A
RFC3
MANF
CEACAM20
ELMOD2
TUBB3
PMEL
KIAA1109
CDK2
BRI3
RFPL2
ZNF343
MRPL11
RBM42
CKMT1A
MRPS23
STT3A
FCRLB
PKP4
LYN
MYDGF
PDCD6
HSD17B8
TUBAL3
TSNAXIP1
RANBP10
UQCRC2
LINC02210-CRHR1
AATK
LIME1
METAP1D
UBN2
ZBTB7C
USP40
PACRGL
CDX2
HDDC3
EIF1AD
BANF1
GCHFR
WDR12
CARF
ECH1
SAMD1
ATAD1
ZSWIM3
ACOT8
METTL8
DCAF17
B4GALT4
DMXL1
TNPO3
PPP1R14B
PGPEP1
SHC1
CKS1B
ETFDH
C4orf46
DUSP6
POGLUT3
MOSPD1
ARL5A
MON1A
INTS7
DTL
ZFAND5
ZNF704
PCNX4
KLHL4
GXYLT2
C20orf141
TMEM181
IL11RA
OPA1
PIK3CB
AMPD3
TUBG1
RETREG3
C11orf49
VCPIP1
C8orf44-SGK3
LARS1
SELENOK
ERCC1
POLR3A