ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX026267 | Caco-2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◣ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◢ SRX748420: HCT 116

◢ SRX748425: HCT 116

◢ SRX748426: HCT 116

◢ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX150698: Hep G2

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX702028: hESC HUES64

◢ ERX159250: LoVo

◢ ERX159251: LoVo

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

PHF12
CSTF1
AURKA
SLCO2B1
MIA2
SLC7A7
PAOX
BTNL8
SELENOP
HNF1A
PKP4
RPS7
KIF21A
VIL1
PCYT2
PLEKHG6
ADAP1
RPS3A
ACY3
SHISA5
CACNB2
STARD4
APOC3
AHCY
WDR36
TATDN3
NSL1
ACOX2
IGSF23
ACOT7
ADGRG7
MVP
SEH1L
SLC51B
ZNF567
DENND2B
F7
PANK1
MRPL44
STX16
CDK5RAP1
LBX2
RBKS
BABAM2
LOC100129484
ORC2
HAAO
JMJD1C
SDHAF1
EIF6
PINK1
CREB3L3
VAMP5
AMACR
POLDIP3
DIP2C-AS1
KNL1
VTN
NEK2
ZNF214
NLRP14
TANK
C11orf49
EHBP1
GSDMB
SCAF11
ANKRD40CL
F10
WDR74
BRCA1
TCEA2
ABLIM1
ACY1
PLEC
TACO1
CWC25
CLPB
TMBIM1
MYADM
LGALS2
MGST2
MCRIP1
RAB17
ZNF827
BORCS7
APOB
PARD3B
SH3D19
MMADHC
CYP17A1
PHF14
SUCLA2
SLC45A4
TNFAIP1
IFT20
APOA1
NDUFS1
EEF1B2
HGD
LSM14A
SELENOI
ADGRF3
COX16
LRRC29
PLXNB2
KMT2D
PRAP1
EIF1AD
BANF1
SSTR1
AP2S1
ZNF529
TMEM181
GNAL
BLOC1S5
NUDT13
DHRS3
RBM42
PABPN1
RAB37
MRPL16
CCDC90B
PPIP5K2
CDC14B
CCDC107
MYL12B
TECR
DNAJB1
IYD
U2SURP
MRPL48
MGAT1
CPHXL
KMT5A
SMG5
SIAE
SPATA2
STK24
CAMSAP3
CNOT2
NDUFS7
TMEM115
TRIP4
MAPKAPK5
RBBP5
NPAS4
IQANK1
FAM83H
PEPD
SMAGP
STARD7
CCR6
ST3GAL6
CISD1
ANK3
IFTAP
GSTK1
SKIV2L
NELFE
TJP3
AJUBA
ZNF564
RGL1
ARPC5
AHSG
EHHADH
TMPRSS4
DDX23
ESRRA
SMG8
MBNL2
CLIC1
TBCCD1
CCDC146
IFNGR1
DECR2
NDUFS3
KBTBD4
CTSB
VPS54
AQP11
DNASE1
IST1
PAK4
SPATS2L
APOA2
TMEM254
METTL7B
SMARCD2
BOD1
ZNF165
TMEM92
RBM33
TUT1
GTF3C3
PRR5
B4GALT4
WDR24
OPA3
PTK2B
CRNKL1
CFAP61
NR1D1
TNFRSF10B
NUF2
ZNF219
PRKCSH
CCDC151
NPC1L1
NR0B2
DDC
RBM39
NOSTRIN
FAM149B1
ECD
NCEH1
BANP
INTS4
DYNC1I2
ZMAT1
ZNF487
TDP2
ACOT13
RHOBTB2
SLC23A3
TCIRG1
H4C3
FRA10AC1
DSTYK
PPIL2
SEC16B
MMP15
AAR2
BMF
BCL9L
GPR137
SCP2
SLC10A5
GRTP1
FASTKD1
APOM
USP30
C1orf174
LRP2
BCL7B
NDUFA6
ZNF747
RPL34
UBA5
PDXP
SURF4
GNG4
TAOK3
C1orf210
SEC23A
SCNM1
LYSMD1
MRPL11
CHMP4B
PRRG2
NOSIP
CSTF2T
ZNF205
SOS1
TOMM40
ACSL1
TFEC
DOK4
SMIM11B
SMIM11A
TMEM86B
KBTBD6
WNK1
HNMT
SOCS5
AATK
N4BP2L1
ZNF576
IRGQ
AGMAT
C17orf75
UPB1
MAP3K11
NEURL2
CTSA
NSUN5
AKAP1
PAFAH2
SUPV3L1
MRPL20
TMEM71
PHF20L1
PLA2G12B
COPS7B
ZFYVE1
UBA6
PPRC1
YJU2
MMACHC
CLDN4
SRC
HADHB
HADHA
PUS10
PEX13
ANXA9
OTULIN
APBB1
GAMT
MARK2
CPPED1
TMCO1
GPR35
KLC4
CLNS1A
NPRL2
CYB561D2
ISY1-RAB43
ISY1
TFPT
PRPF31
DFFA
TRMT2A
RANBP1
TMEM242
ALPI
RAB32
CREBRF
KATNB1
TMEM144
NDUFA2
IK
ANAPC5
TMEM109
WDR46
PFDN6
KRR1
MYO1A
ABCC6
TRIM15
KRT8
JRK
GPANK1
CSNK2B
NIPAL1
CNGA1
HSD17B11
TM9SF4
INHBE
PPP1R12B
PPP1R3D
FAM217B
UNK
ZNF223
COPS4
PAAF1
COA4
PEMT
FYB2
PRDM10
ARNT
DRG2
COMT
KIAA1217
SLC25A16
BMS1
HSPE1-MOB4
HSPE1
HSPD1
SLC39A5
RPS19
DENND5B
FDX1
RPL12
LRSAM1
MAP4K5
ATL1
RNPEP
SEPSECS
ZNF225
MED23
RALGPS1
CDC34
IFRD2
COMMD3-BMI1
COMMD3
HMGCS1
EMP1
GBA
HNF1B
CACNA1G
AS3MT
MEP1A
TECPR1
TMTC3
CEP290
DDA1
GFER
MAIP1
KCNK10
GOLT1A
GRWD1
HK1
ASAH1
SLC22A18
BSDC1
FAM98B
SELENOH
TIMM22
NR2F2
RFXANK
BORCS8-MEF2B
BORCS8
GDI2
CIDEC
METTL25
CCDC59
MRPL21
IGHMBP2
IGFL4
TRAF4
TOMM70
LNP1
WDPCP
MDH1
MRPL30
MITD1
ZNF232
SPHK2
RPL18
PRR3
GNL1
AGT
GALM
H4C12
MRPS16
GATB
ZFYVE27
CCDC57
TBC1D16
MTRF1
MTRNR2L8
DNMT3A
PEX11G
EPHX2
DHX35
EIF3F
PIAS1
SUGCT
MPLKIP
GSDMD
ATXN7L1
MTIF2
CDIP1
ATP5MC3
RDH5
PALM2AKAP2
ABCC9
NUP107
FGFR4
COX7C
RABGGTB
C4BPB
NFXL1
TSNAXIP1
RANBP10
EDEM2
ZNF461
TASOR2
SLC35B1
PDZK1
GSTO1
NCOA4
CFAP97D1
NID1
CEP43
SHANK2
BUB1B
AXL
TMEM101
CXCL2
CDC25A
ZNF155
AP1M1
RGN
ATXN7
ALAS1
IQGAP3
MAN2C1
KATNBL1
BRPF3
RAB11A
TAF11
SCAF1
BBS1
GFM1
RASSF9
ERCC6L2
RRP15
DLC1
NFKBIZ
HSPH1
SLC2A14
MT1F
RPL29
BIRC2
NUFIP1
GPALPP1
MRPL40
HIRA
WDR81
CTU1
RPTOR
NUP214
SOD2
PJA2
METTL8
DCAF17
ACAT2
PEX3
ADAT2
ZNF770
DNAJC11
LARP1B
ERF
FOXJ3
CDHR5
MRPS18C
HELQ
BTRC
TIMM23
NEDD8-MDP1
NEDD8
GMPR2
LUC7L2
FMC1-LUC7L2
ZSWIM1
FMC1
RTEL1
MTRNR2L2
EPS8L3
XYLB
PIKFYVE
HPS5
GTF2H1
UTP14C
ABCF2-H2BE1
ABCF2
C19orf53
MRPS15
NR2C1
NODAL
FAM136A
NOP16
HIGD2A
NDUFC2-KCTD14
NDUFC2
SP2
INTS12
GSTCD
VIPAS39
AHSA1
FUBP3
ELP3
ZNF764
ALG10B
BAIAP2L2
INO80B
SOAT2
ABCC2
HDHD3
NDUFAF5
ESF1
PRCC
SNRPF
GRM4
SYT7
KDM5A
CCDC77
TMEM139
CD99
NME1
RSPRY1
TCOF1
FUT2
TRIM46
KRTCAP2
PDE11A
CLRN3
RBM8A
RAD51AP1
C12orf4
HSP90B1
RPS3
TCAIM
TTI1
RPRD1B
GMPPA
POLR3F
DZANK1
ZNF302
ADD3
RCAN1
GBF1
FAM168A
CRK
F2
SLC17A5
ALG10
ZNF862
FBXL19
COASY
SLC25A53
ANKS4B
TSKU
SP5
DENR
SMLR1
MRPS31
MRPS34
EME2
C15orf39
SCT
GAB2
PRPF40A
RPS6KB2
AMBRA1
EMSY
UNKL
PGPEP1
COQ5
MTMR9
CSRNP1
CRADD
HNF4A
RPS26
ASXL1
USP48
TP53I3
PRR13
EPS15
MAP1LC3B2
RNF128
KIF3B
INTS5
SHF
ZSWIM3
ACOT8
AMN
KAT7
UBQLN4
LAMTOR2
NOP14
GRK4
C1orf109
QPRT
LRIG2
FAM185A
SNAP47
JMJD4
TEFM
GALK2
COPS2
EXD2
STK31
TOR1AIP1
MYL3
TMEM41A
RNF121
LOC100133315
CENPS-CORT
CENPS
TOB2
A1CF
DMAP1
RAB11FIP1
CSNK1A1
BLCAP
CCDC71
SSBP1
ADM
ARHGEF12
DPP3
STX18
ZFR
ZNF224
SSNA1
ANAPC2
PES1
MIA3
RBP5
RBP2
SMG7
CLSTN3
SLC19A2
KMT5B
ATP5F1D
SCML4
ZNF444
PWP1
RPGRIP1L
FTO
SNRPD3
GUCD1
ZNF512B
ZBTB45
AGPS
RRN3
DENND1A
VPS28
FEM1A
SENP1
PFKM
CYP19A1
SNRPA
SLC31A1
FKBP15
MRPL24
ZNF408
ARHGAP1
SIRT4
TMEM184A
VILL
DHX33
WDR90
PKIG
HAX1
GFM2
IGFL2
ISOC1
POLR2H
LEAP2
IQSEC3
MRPL3
CBS
IPO4
ZNF181
ARHGDIB
ZNF112
ZFP91
LPXN
SEC22B
M6PR
KLRG1
FNIP1
ARPIN-AP3S2
ARPIN
YAP1
SLC7A9
CFB
POLRMT
USPL1
HMGB1
LMBRD1
PROSER1
NHLRC3
ACAP3
ALG14
ZNF354A
CCAR2
NPPB
MAF
ZFAND2B
FABP1
APOBEC1
BOLA1
ZNF28
DCP1A
TM9SF2
GID8
DIDO1
CLDND1
GMNN
PATZ1
TTLL9
SECISBP2
SPRY4
ADH6
MRPL39
ZNF532
SORT1
CFLAR
NR1H2
C2orf49
TK1
AFMID
GRB7
DUSP15
TRUB1
CCDC93
CHCHD2
CLYBL
CCND1
SLC33A1
RBSN
ATF7IP
TLCD2
INTS1
CDK12
TCAF1
HYAL2
PHF7
BAP1
UBE4A
HDAC7
PCYT1B
TTC31
CCDC142
PSMB3
PPP1R13L
DDX41
SLC35A3
ZFYVE19
DNAJC17
C1GALT1
UMPS
SLC26A1
POLR1H
WASHC2A
KANSL3
MNAT1
MOK
WDR11
GARS1
CMPK1
TPT1
BAZ1B
TMCO2
RBM7
C11orf71
BNIP1
RIC8B
SAP18
CMC1
YEATS4
POM121
LPIN3
SF3A3
PHB
KCTD7
TXNDC9
EIF5B
TRUB2
COQ4
MTA1
SART1
ALKBH7
CYCS
ABT1
VCPIP1
C8orf44-SGK3
MANEA
KLHL20
PERP
TRIM14
TOGARAM1
KLHL28
DNAJC15
POT1
ZBED4
SMPD3
TIMM23B
PARG
SYT8
TAS1R1
NOL9
RSPH14
INVS
ERP44
SETX
EPN3
ZNF230
USP16
SUPT7L
SLC4A1AP
ALOXE3
CCDC141
TMPRSS13
RPL27
DHRS11
CYREN
NDUFA9
AKAP3
ZNF485
METRNL
TMEM150A
MYO1E
TREML1
STYXL1
MDH2
SCO2
PHF1
LARS1
MXI1
WNK4
FBLN1
PAQR4
ZNF235
EDRF1
SMYD5
CRPPA
TMEM199
POLDIP2
CES1
SHFL
SLC25A28
TOP3B
ATXN1L
DCT
HINT2
KDM3A
ACO1
NAGPA
CCP110
ABRAXAS2
GAB1
SNRPB2
IDH3B
VPS50
HEPACAM2
ANKRD40
GAS2
MAP3K7
EPS8
AGTRAP
UTP3
RAB30
GFI1B
TRMT61B
MRPL19
NFE2
VTA1
NMBR
ACSL5
NR1H3
GGNBP2
SEMA4G
TSSC4
DPP4
LAPTM4A
CDK11B
CDK11A
SLC35A2
ATG101
PGBD4
EMC7
TTI2
FAAP20
ZSCAN25
GDF15
CRYGC
BTBD19
SNX17
EIF2B4
PNPO
STAT3
SNAI1
GLTPD2
LEKR1
PSEN1
RPS11
GC
LIN54
ZBTB8OS
RBBP4
KIF16B
HBP1
LIN37
PDSS2
AQR
FAM200A
BOD1L1
ASB9
PROS1
GEMIN6
ATXN1
MRPL55
ZC3H12D
IL32
ARMH3
AHCYL2
WDR70
NQO2
NFE2L2
NCOA2
ELOC
CCR1
TMEM63A
IDH1
ZNF419
ENTPD8
GSK3A
UROS
BCCIP
CPSF1
GDPGP1
CIB1
ZNF226
MRPS25
CLASP1