ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX702027 | hESC derived mesendodermal cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◢ SRX748420: HCT 116

◢ SRX748425: HCT 116

◢ SRX748426: HCT 116

◢ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX150698: Hep G2

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◣ SRX702027: hESC derived mesendodermal cells

◢ SRX702028: hESC HUES64

◢ ERX159250: LoVo

◢ ERX159251: LoVo

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

PKP4
HAAO
ATXN7
LBX2
RBKS
BABAM2
STARD7
FNIP1
PINK1
RPS3A
VIL1
ABCD3
PERP
MGAT1
ZFAND2B
SHISA5
TNS3
RAB32
AGMAT
SMG5
TATDN3
NSL1
C1GALT1
MGST2
KCNIP4
SKIV2L
NELFE
MRPL20
NEK2
TMEM177
ORC2
UGDH
PDE11A
CSRNP1
MMADHC
SRSF11
LRRC40
COPS4
NUDT16
CDKN2AIP
DNMT3A
TIMMDC1
LOC100129484
CCDC71
CREBRF
ARHGEF16
HNRNPDL
ENOPH1
SLC35D1
VTA1
NMBR
BTBD19
CMPK1
PRPF40A
ARL6IP6
MFN2
SH3D19
TMEM178A
HSPE1-MOB4
HSPE1
HSPD1
RABL3
GTF2E1
PSMA5
MANEA
HSD17B11
NR0B2
CCDC93
KLF7
CLDN19
WDFY3
HMGCS1
MTARC1
UBR4
N4BP2
ATXN1
PPP1R12B
GMNN
PHACTR4
TTC31
CCDC142
VANGL1
FAM110C
DHRS3
TMCO1
ZFR
C1orf174
TFDP2
MMACHC
GSTM4
RWDD3
GALE
ZBTB8OS
RBBP4
RAB17
ZFP36L2
METTL8
DCAF17
EIF4EBP3
FYB2
BTN3A2
TP53I3
SHPRH
RGL1
ARPC5
ALCAM
ACY1
PJA2
RNF220
HADHB
HADHA
LRIG2
ACOX2
PPIP5K2
FASTKD1
MIA3
C2orf88
IGF2BP2
FAM200B
LAMTOR5
GOLPH3
UBA6
TSN
PHF1
POMC
FOXD3
PRR3
GNL1
GFM1
XPR1
TMEM17
OTULIN
CMC1
CLIC1
SYNCRIP
UMPS
SELENOP
UFL1
APOB
PHF7
BAP1
FTCDNL1
CRYBG1
ZNF687
FIGN
NFXL1
HUS1
LARP1
VGLL3
MSH5
ACSL1
DCAF6
RBMXL1
KYAT3
TWF2
CFAP91
ARL5A
LGR6
DCHS2
TMEM63A
RREB1
FAM78B
EHHADH
SMIM12
MXRA8
FAAP20
VAV3
RPP40
SIAH2
GNAT2
AMPD2
LAPTM4A
KHDRBS1
NDUFS6
DLG1
CLSPN
TRDN
FBN2
ST3GAL6
SLC25A24
PDE7B
PEF1
B4GALT4
EHBP1
CEP43
TOMM70
LNP1
MME
GIPC2
SMLR1
B3GNT2
IFIH1
GCA
DKK2
KANK4
C1orf53
SOS1
SH3BGRL2
NAB1
VAMP5
CHST13
WIPF1
BSDC1
SESN1
CEP57L1
PDGFRA
ZNF124
TMEM150A
XYLB
ZNF827
VARS2
MEX3A
LMNA
MAST4
C3orf52
ANTXR2
IL6
ALDH5A1
EIF4G1
GGCX
TIA1
TMEM144
SNX7
SEL1L3
IPP
C1orf115
OCIAD2
AGPS
TMBIM1
NDUFS1
EEF1B2
TRIP12
FBXO36
TCOF1
SLC40A1
MTHFD1L
RIPK1
TTC39A
AP5Z1
ATAT1
INTS7
DTL
AGTRAP
TAF9
RAD17
AK6
DPPA4
TAF11
ANKS1A
AGPAT1
RNF5
IL18R1
UCP1
TBCCD1
SELENOI
ADGRF3
CMTM8
KIAA0754
HLA-A
NIPAL1
CNGA1
OTUD4
RBM8A
ANXA9
ETFDH
C4orf46
NID1
PEX3
ADAT2
ETNPPL
USP37
CNOT9
SOCS5
PDZK1
FAM71B
SLC30A1
SOD2
STX18
EFHD1
NGF
TIGD4
ARFIP1
MEGF10
GMCL1
TRABD2A
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
NAA50
ATP6V1A
CLASP1
RAP1GAP
ABRACL
SLC22A3
AOX1
ELF3
SLC25A4
GRIK2
SEPSECS
PDE1A
SEC16B
MAIP1
FOXJ3
RPL34
SDC1
MSL2
NFIA
FAT4
BLOC1S5
TMCO2
RPS6KA1
CFAP299
PLPPR4
RARS2
ORC3
DOP1A
BZW2
ANKMY2
COBL
SFXN5
LARP1B
MICAL1
AMT
RMDN2
CCDC181
PUS10
PEX13
PLSCR1
RAD54L
SLC35A3
CCDC50
UTS2B
TRIM15
COPB2
ACAT2
GOLGA4
NQO2
MTRR
FASTKD3
RPP14
HTD2
MIA2
PHF12
PAOX
CSTF1
AURKA
MVP
HNF1A
ATXN7L1
MTRNR2L8
KNL1
SCAF11
PDXP
MTRNR2L2
PANK1
MAP3K11
SLC7A7
NR1I3
PCYT2
RGPD2
RGPD1
CCDC90B
CCDC107
SLCO2B1
KIF21A
PABPN1
WDR74
DEAF1
NEURL2
CTSA
IST1
METTL7B
ZNF567
NRL
DCAF11
GPR35
CREB3L3
SEC23A
CDC14B
EPS8L3
SLC19A3
ACY3
IDH1
RAB37
ABLIM1
HNMT
PLEKHG6
ABCC6
IGSF23
AHCY
DENND2B
AJUBA
F10
GAB1
AHSG
CYP17A1
ZNF219
TDP2
ACOT13
PRKCSH
CCDC151
PPIL2
AQP11
FCHO2
DENND5B
RABGGTB
SUCLA2
SDCBP2
CBS
ZC3H12D
SCARB1
ANKS4B
SLC45A4
GDI2
TCIRG1
KLC4
TK1
AFMID
NDUFA6
KRTAP5-7
EIF6
IQANK1
FAM83H
S100A16
ADAP1
HGD
MAN2C1
IL32
CYB5R3
ZNF232
MCRIP1
GNAL
GSDMD
IFNGR1
APOA1
ZNF764
MBNL2
CPPED1
MRPL2
ALKBH7
BORCS7
APOC3
GNG4
RAD50
PEPD
HRCT1
WNK4
CFB
C9orf64
PRAP1
H4C3
TRIM14
F7
ATP7B
ALG11
SEPTIN9
OPA3
SMAGP
NR1D1
NEU4
ZNF184
TNFRSF10B
C3
INHBE
QPRT
CBY3
IQCN
TM4SF5
PAK4
STX16
WDR36
SMYD5
TJP3
CSNK1A1
MTIF2
DOK4
BLCAP
SARDH
MST1
DIP2C-AS1
BRCA1
ZNF564
MYADM
PEX11G
PLXNB1
MTMR4
MMP15
BCL9L
CD2BP2
TUBG1
RETREG3
AKAP1
SLC28A1
TRAF4
CIDEC
ZNF512B
AMACR
CRK
BIRC2
SPATS2L
CCR6
SHF
SPATA2
ISOC1
RBIS
DNAJC22
JMJD1C
SPPL2A
MTRNR2L9
TAOK3
POLDIP3
GPR137
PAAF1
COA4
UBA5
SLC2A14
TANK
NUDCD1
INTS9
HMBOX1
CACNB2
RPS7
AGT
PCGF5
TMEM140
KIFC3
MOGAT3
ZNF214
NLRP14
LCAT
MYO1A
ANKRD40CL
KMT5A
ASGR2
VEGFA
ATXN2
VTN
C11orf24
ARNT
ALDH3A2
SCP2
PHF14
POLR2H
MPND
DDC
IYD
SEH1L
ENTPD8
TACO1
SFRP5
MYL12B
MOV10L1
STK24
PLXNB2
ETFA
CYP4F3
INTS4
GPT
DRG2
CPHXL
MAP4K5
ATL1
SLC39A5
C1orf210
GDF15
GALM
ZFYVE27
PGLYRP2
PGPEP1
ANK3
CDIP1
NIPSNAP1
GALK1
KRT8
TOGARAM1
KLHL28
GPHA2
GAMT
ZSWIM3
ACOT8
CAMSAP3
C4BPB
TUBG2
CLDN4
GRB7
CRYGC
SH3D21
KPNA7
PRXL2A
SOAT2
ZNF444
COMT
FUT5
ZNF747
CD86
CCDC146
NRSN2
TJAP1
SMARCD2
RFPL2
STARD4
TMEM181
U2SURP
ATP5MC3
PIKFYVE
DDX19B
RCL1
ZNF696
LIN54
PKLR
WFDC3
DNTTIP1
ACSL5
RNPEP
GUCA2A
PGAP3
ERBB2
C2
ROCK2
TMEM139
GSTK1
MAF1
TMEM254
NGEF
POLR3A
TCAF1
TMEM256
TECR
DNAJB1
ADD3
NUFIP1
GPALPP1
PDLIM2
MAF
C11orf49
ZNF57
LSM2
CDK5RAP1
ARPIN-AP3S2
ARPIN
PRDM10
THNSL1
C11orf86
NPTN
SLC41A2
SCNM1
LYSMD1
MLF2
HPS5
GTF2H1
UBE2R2
PTK2B
PCGF2
LSM14A
PRR5
TINAGL1
CLRN3
RBP5
GLTPD2
MARK2
HINT2
RCAN1
BRIP1
CRNKL1
CFAP61
NUP107
F2
TPT1
RSPH14
ASB9
CYCS
RPS15
PALM3
RNF149
KCNAB2
NOSTRIN
FUT10
GFER
PPP1R3D
FAM217B
MYH7
CES1
ACAP3
SLC10A5
TBP
PSMB1
SNRPF
AMN
TMEM71
PHF20L1
STAT5B
SDHAF1
APOM
VPS28
GRTP1
MLLT10
LEAP2
CYP8B1
DYRK2
TMEM202
TRMT2A
RANBP1
FEM1A
POLRMT
CEP152
PYGL
PCK1
RBM33
RDH5
SLC36A1
IL7
AK3
SERPINA1
RNF19A
TTI1
RPRD1B
ASAH1
SNRPA
HPR
TREH
NGRN
TFR2
CLCF1
RIN3
SENP1
PFKM
MIEF1
CWC25
SAXO1
RRAGA
RPL27
PALM2AKAP2
ACACB
KIF16B
FABP1
PWP1
ZSWIM8
SLC26A1
RPGRIP1L
FTO
TF
AIG1
PRR13
FBXW5
C8G
ASGR1
PAFAH2
BTNL8
ABCC2
POLR1H
HBP1
BPHL
ZNF343
CALML4
SASH1
C19orf12
ZNF165
RBBP5
BAAT
CHCHD2
LOC110384692
C4B
C4B_2
C4A
RHBDD1
IRS1
AIFM2
APOC2
SURF4
MAP2K3
SLC31A1
HYAL2
FKBP15
ANKRD26
COQ5
LGALS2
LINS1
ASB7
GRM4
ITPK1
FDX1
ORM2
ETV4
NFATC3
F12
POMGNT1
CD99
DECR2
AXL
MTFR2
SLC22A18
HOXA3
FAM185A
DNAJC15
KDM3A
EPHX2
SSTR1
SSUH2
TPRN
TTI2
AAR2
VCPIP1
EFNA1
C8orf44-SGK3
SLC2A4RG
STN1
SRSF4
ORM1
SORT1
RFFL
CLPB
NR2F2
DOK7
MRPL40
HIRA
ACSS2
CYP19A1
SLC22A9
EIF1AD
BANF1
RFX7
DCLRE1C
LTV1
DGKD
SLC22A7
CYB5A
ETV5
RAB30
PIPOX
APOBEC1
SYN3
ARMC5
GCHFR
AATK
CFLAR
BAZ1B
KATNB1
NFE2L2
SLC38A10
LIME1
CYP27A1
MNAT1
CHD1
NODAL
VPS54
HEPH
ERF
ADGRG7
DHRS7B
ALG14
SCO2
C3orf86
YEATS4
PTS
PTPA
CRAT
ASPDH
HP
CXCL17
MRPL24
NRBF2
USP10
RMND1
ARMT1
LRP1
APOA2
MRPL11
GAB2
TMPRSS4
GPR108
GFI1B
RBMS1
ZNF529
CHMP4B
CCDC68
EMP1
POT1
C11orf91
INVS
ERP44
FZD5
OSBP2
ESRRA
ACOT7
SMIM11B
SMIM11A
PIM3
SERPINF1
SERPINC1
ZNF548
SLC51B
PYROXD1
BOLA1
MRPS24
EPS15
ABAT
ENGASE
SERPIND1
N4BP2L1
COX16
MRPL44
PSMB3
CDK11B
CDK11A
ADPRHL1
CX3CL1
MEP1A
FGFR4
ARSB
LMO7
PROS1
ZNF384
DAO
EPS8
PKP2
UGGT2
GSTO1
TLDC2
SECTM1
SMG8
RBM42
ZNF230
POLD4
SULT1A4
SULT1A3
CLNS1A
NOP9
DHRS1
PLA2G12B
TECPR1
PLEKHJ1
C11orf52
SLC16A3
BANP
SUOX
CLUAP1
MRPS30
ZBED4
SLC25A16
IPO4
MSLN
H4C12
RNF31
PSME2
FAM136A
NSUN5
ACO1
WDR90
TSKU
ATP5MF-PTCD1
ATP5MF
UTP14C
TRIM35
STK11IP
SHPK
CTNS
PTBP1
PACSIN2
C19orf54
TCEA2
PPP1R37
SH2D5
FAM98B
CNOT2
BDH1
SLC25A45
AASS
DLC1
PARP4
MAOB
USP16
MRPS28
ZNF101
MAFG
GMPPA
GPANK1
CRADD
ACOT2
ZBTB4
POLR2A
MUC13
CRLS1
SEMA3B
PROZ
NME1
IL13RA1
SP5
RBP4
FITM2
PCYT1A
SLC19A2
MIIP
RPL12
LRSAM1
TMEM19
KYNU
ALDH2
TMEM101
NPM2
NEDD8-MDP1