ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX748434 | HCT 116
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◢ SRX748420: HCT 116

◢ SRX748425: HCT 116

◢ SRX748426: HCT 116

◢ SRX748433: HCT 116

◣ SRX748434: HCT 116

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX150698: Hep G2

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX702028: hESC HUES64

◢ ERX159250: LoVo

◢ ERX159251: LoVo

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

MIA2
SKIV2L
NELFE
CCDC107
PHF12
MTRNR2L8
NR1I3
DEAF1
NEK2
ATXN7L1
NDUFS1
EEF1B2
CLCF1
C11orf86
CSTF1
AURKA
MAP3K11
CYP17A1
HRCT1
MTRNR2L2
SLC41A2
FCHO2
SFRP5
S100A16
KPNA7
CREB3L3
SCARB1
TDP2
ACOT13
INTS4
CCDC90B
RAB17
ROCK2
ACY1
SYT12
GNAL
CDC14B
TJP3
PEX11G
ZNF764
C19orf12
RBKS
BABAM2
USP37
CNOT9
ABLIM1
DHRS3
BAAT
ZC3H12D
SH3D21
PIM3
TNFRSF10B
SLC38A10
SHTN1
RAD50
CD86
GUCA2A
ARNT
KMT5A
UBE2R2
PPP1R12B
TINAGL1
SH3D19
ALDH2
MAP4K5
ATL1
SECTM1
TOGARAM1
KLHL28
NGRN
GAB1
CEP152
ZNF219
ZNF696
PRMT2
ERCC6L
KRTAP5-7
RPS3A
RASSF5
KNL1
IST1
MPND
MTMR4
GOLGA4
LHB
SEC23A
DENND5B
LBX2
PRDM10
SESTD1
SLC39A6
ELP2
NQO2
MLLT10
TTC31
CCDC142
MVP
METTL7B
SH2D5
C10orf90
PABPN1
SDC1
ALDH3A2
MCRIP1
PPP1R27
OCIAD2
PCYT1A
SH3BP5L
ZNF564
SPINT2
RGPD2
RGPD1
SELENOP
CREBRF
VGLL4
MGST2
SF1
MIA3
PRAP1
BIRC2
SLC19A3
IGSF23
PDE11A
IQCN
VTN
ARPIN-AP3S2
ARPIN
CHCHD2
MAFG
PIKFYVE
SCAF11
DENND1B
BORCS7
SLC7A5
PRR7
MLF2
SHISA5
MIDN
MIIP
DCLK1
SRSF11
LRRC40
MTRNR2L9
PRR3
GNL1
MMACHC
NUDCD1
BAZ1B
PYY
NAGS
DHRS7B
RAB34
RBIS
PLEKHJ1
SHPK
CTNS
GPR137
C19orf33
CLASP1
FAM185A
CD2BP2
MBNL2
GFM1
CCDC186
TIRAP
EPS8L3
APOA1
MOV10L1
POLRMT
RFFL
HERC5
IL32
MXD3
VWA7
NR1D1
TTI2
EMP1
COPS4
PTS
CRPPA
C11orf24
MTFR2
PPM1D
SH3BGRL2
DKK4
MFAP4
TMEM71
PHF20L1
CPHXL
PDXP
MSLN
FHDC1
SMYD5
IDH1
TRIM14
TBC1D23
PPP1R9B
SOD2
SLC25A28
PANK1
SMARCD2
RCAN1
NOSTRIN
PACSIN2
PGLYRP2
CDK11B
CDK11A
ISL2
PEPD
DKK1
RABGGTB
PERP
C1orf174
INTS9
HMBOX1
UGDH
PYGL
BLCAP
COQ5
RPL41
GPT
TBP
PSMB1
POMGNT1
PPP1R15B
SLCO2B1
RPL34
BTBD19
TCTEX1D4
CSNK1A1
GABARAPL1
ZNF512B
MSH5
ACSL5
HNMT
PPIP5K2
CIDEC
CLRN3
ERICH4
PITPNM1
HMOX1
HPS5
GTF2H1
ETV4
LRP1
SOS1
CMPK1
APOBEC1
MRPS30
CDC25A
HSPE1-MOB4
HSPE1
HSPD1
AGPAT1
RNF5
YAP1
TTI1
RPRD1B
PHACTR4
CLK2
KLC4
BLOC1S5
MRPL2
SELENOI
ADGRF3
UFL1
CNOT2
U2SURP
ACSL1
NIBAN2
LINS1
ASB7
PARP4
NCSTN
COPA
RPS15
STN1
CLNS1A
HDHD5
UBR4
TIMMDC1
SLF1
KIAA0825
TMEM254
SEMA3B
WDR81
AWAT1
ACOX2
ALKBH7
MICAL1
ABCC2
CHMP4B
KIF16B
TAGLN2
PPP2R5B
PJA2
VPS54
FDXACB1
C11orf1
SRSF4
NFXL1
TMEM17
BRCA1
RPGRIP1L
FTO
RAB30
G6PC2
ATP5MC3
HINT2
SFT2D3
ARHGAP45
PRXL2A
BEGAIN
PPIH
ARPP19
ASAH1
ACIN1
C14orf119
TRIM6-TRIM34
TRIM6
CRK
SMARCE1
DAPP1
PRKCSH
CCDC151
RPL27
SCARA5
TBX1
PHF5A
ACO2
TRIM15
KATNB1
PTGR2
ARHGAP10
STX18
SLC31A1
FKBP15
USP16
CCNI
ABHD2
KIF21A
PELO
ITGA1
ZNF184
STK40
SNRPF
RNF125
SUCO
SLC26A6
TOMM70
LNP1
PAQR4
CEP128
PRDX6
LRRC6
MTIF2
POT1
PDSS2
IBTK
SMIM14
PRR5
DCLRE1C
NEURL2
CTSA
LSM14A
EPS8
HNRNPH1
SAXO2
EFL1
PSMA5
UGGT2
MRPS28
OGFOD2
RFT1
LARP1
PWP1
GOLGA8B
RNF114
DCTPP1
LAPTM4A
SLC26A1
CISD3
TMOD1
CYB5R3
FLVCR2
RBM8A
TRPC4AP
RFX2
RAB37
KRT8
PTP4A1
CLPX
ARHGAP12
MMP20
POLDIP3
SAXO1
RRAGA
PPID
TCP1
MRPL18
ISCA1
GM2A
NRL
DCAF11
MYL12B
STAT6
CAPS2
OGA
TRAF4
SP2
NQO1
SLC50A1
POLR2H
MAP2K3
KATNBL1
FBXW5
C8G
PPP1R37
TOMM40
NUP107
BOLA1
CDC14A
RNF169
KIFC3
SLC28A1
TAOK3
CFLAR
ZBTB20
CCDC93
ZNF747
UQCRC2
FZD5
CCNL1
RNF212B
CLDN4
NIP7
COG8
UBN2
PUS10
PEX13
H4C12
NR2F1
SECISBP2
RBM7
C11orf71
WDR74
SNRPA
C19orf54
GPANK1
CSNK2B
ESCO2
USP36
ATAD1
ZSWIM8
FAM169A
USP3
BCL2L15
NOP9
DHRS1
CAPN2
C11orf52
ZNF181
VMP1
PTRH2
LAMA3
SMU1
TTC39C
SHF
ANKRD40CL
ZSWIM3
ACOT8
ZNF230
CD68
SEC24C
PRAG1
RB1CC1
MAP1LC3C
HSCB
CHEK2
TUBG1
RETREG3
FDX1
CCNH
GTF3C2
BHLHA15
TBC1D31
DAP
OSBPL7
PRKCI
S100A2
IFNGR1
TMCO1
CCDC71
PRPF40A
TMEM9
HSD17B14
ZFYVE16
CMC1
PTPRG
MIGA1
CLUAP1
EMC4
HEPH
H4C11
PPME1
C2CD3
KCTD7
CDH3
NUFIP1
GPALPP1
LGALS1
MGAT4B
SGPP1
FASTKD1
RTKN
PDGFB
ANKRD13A
HADHB
HADHA
MT1F
DQX1
SLC25A24
VPS26B
NCAPD3
MANF
ZNF860
OSBPL10
BCL9L
ALDH3B1
CNOT6
TEN1
ACOX1
CEP85
ADAR
STK11IP
HPCAL1
OSR2
THADA
SLC2A14
EIF4EBP3
SUOX
RTP3
SCP2
RBM33
APOA2
METTL8
DCAF17
SLC25A45
EIF4E
QTRT2
CCDC191
RTN4
TATDN3
NSL1
GGCX
ZNF384
HTRA2
VIRMA
EHD2
TMEM181
HBP1
ETS2
ST3GAL6
TPT1
RPS6KA1
ASF1B
CYCS
FAM136A
FBXO44
FBXO2
WBP1L
SERPINA1
FBXL19
C9orf85
ABHD17B
MXRA7
TIAL1
SMIM13
PHF14
ARSB
IQSEC2
THOC2
SLC35A3
OTULIN
EFNA2
SKA2
PRR11
UBE2D3
PPP1R3D
FAM217B
GBF1
ST7
LAMTOR4
ECH1
UFSP1
MRPS21
BCAP29
DCTN2
CBY3
OCIAD1
TMEM14C
MMADHC
PTK2B
TRIM35
FAM161B
COQ6
EPN2
POLR1D
LNX2
SMAGP
HDHD3
TTC14
SLC35A2
CCNG1
GUCA2B
CXCL9
VAMP5
VCPIP1
C8orf44-SGK3
PKP2
NME1
TMEM82
KIF20A
BRD8
RGMB
SCOC
CD46
DLST
BRIP1
ASB9
NDRG1
CTH
PRPF8
SMC3
ZNF460
ZNF576
IRGQ
PACS1
ZNF827
HSD17B11
ISG20
PDE4C
LRP10
CALML4
AMT
LEKR1
NUP62
IL4I1
ATF5
NAGPA
AQP3
AHCYL1
MCC
INHBE
ADPRHL1
POLD3
UPP1
ATF4
ALG14
MRPL24
RFC3
TLNRD1
VIM
TMEM143
SYNGR4
TMTC3
CEP290
SF3B5
POC1A
PEX6
TIMM10
ZBTB43
VTA1
NMBR
COMT
MED20
BYSL
SERP1
EIF2A
CRNKL1
CFAP61
IL13RA1
RGL1
ARPC5
RBM27
URB1
NDST1
ARL4A
MSL2
SBF2
KRT80
SPRR3
CANX
PGAP3
ERBB2
RMND1
ARMT1
HSD17B8
KLK6
HAUS4
PPP1R13L
DOP1A
DNAJC14
HSPA5
PKP3
PGM1
TMEM256
MAOB
TIGD4
ARFIP1
CEACAM20
SLC16A5
MUS81
RAB11B
CDA
BLOC1S2
GALM
C11orf91
KRTAP5-10
FAM83E
CRADD
SNRPB
ZNF286A
PSMB3
PCM1
CCNT1
EIF2AK3
LRIG2
C11orf65
LLPH
CCR7
SGMS2
NPTN
GPR108
C16orf70
BPHL
C2orf49
BSDC1
GALE
ZNF75D
ZNF449
NADK
RSPH14
NMT1
DCAKD
DNAJB5
VIL1
UFD1
CDC45
ZNF823
MGAT5B
LDAH
RNF121
LOC100133315
CYBA
ANKRD13B
PSMB4
NUCKS1
NDUFB6
EED
ZNF639
PEF1
MRPL12
OPA3
TXNL4B
DHX38
HLA-A
LOC100289561
LIN37
PAOX
PKP4
HNF1A
HAAO
ORC2
PINK1
SLC7A7
PCYT2
ZNF567
GPR35
AGMAT
ACY3
SMG5
PLEKHG6
ABCC6
AHCY
DENND2B
AJUBA
F10
AHSG
NR0B2
PPIL2
AQP11
APOB
SUCLA2
SDCBP2
TMEM177
XYLB
LOC100129484
CBS
ANKS4B
SLC45A4
GDI2
TCIRG1
TK1
AFMID
NDUFA6
EIF6
IQANK1
FAM83H
TMBIM1
ADAP1
HGD
FYB2
MAN2C1
NID1
ZNF232
GSDMD
MGAT1
CPPED1
APOC3
GNG4
WNK4
CFB
C9orf64
CDKN2AIP
H4C3
F7
C1GALT1
ATP7B
ALG11
SEPTIN9
NEU4
DNMT3A
ABCD3
C3
QPRT
UBA6
TM4SF5
PAK4
STX16
WDR36
ANXA9
SEC16B
ATXN7
DOK4
SARDH
MST1
RAB32
DIP2C-AS1
MYADM
PLXNB1
MMP15
HMGCS1
AKAP1
GIPC2
AMACR
STARD7
SPATS2L
CCR6
SPATA2
ISOC1
DNAJC22
JMJD1C
SPPL2A
TBCCD1
PAAF1
COA4
UBA5
TANK
CLIC1
CACNB2
RPS7
AGT
PCGF5
TMEM140
FNIP1
MOGAT3
ZNF214
NLRP14
LCAT
MYO1A
ASGR2
VEGFA
SMLR1
ATXN2
TMEM150A
DDC
IYD
SEH1L
ENTPD8
TACO1
CSRNP1
STK24
PLXNB2
ETFA
CYP4F3
SLC35D1
DRG2
SLC39A5
C1orf210
GDF15
ZFYVE27
PGPEP1
MRPL20
ANK3
CDIP1
NIPSNAP1
GALK1
GPHA2
GAMT
EHHADH
CAMSAP3
CHST13
C4BPB
TUBG2
GRB7
CRYGC
SOAT2
ZNF444
FUT5
CCDC146
NRSN2
TJAP1
UMPS
RFPL2
STARD4
LAMTOR5
DDX19B
RCL1
SOCS5
LIN54
PKLR
WFDC3
DNTTIP1
RNPEP
C2
TMEM139
GSTK1
MAF1
NGEF
POLR3A
RAP1GAP
TCAF1
TECR
DNAJB1
ADD3
PDLIM2
MAF
C11orf49
CEP43
ZNF57
LSM2
CDK5RAP1
MFN2
THNSL1
SCNM1
LYSMD1
PCGF2
ZBTB8OS
RBBP4
RBP5
GLTPD2
MARK2
F2
FTCDNL1
TNS3
TP53I3
PALM3
RNF149
KCNAB2
FUT10
GFER
MYH7
CES1
ACAP3
SLC10A5
ZFAND2B
AMN
STAT5B
SDHAF1
APOM
SLC22A3
VPS28
GRTP1
LEAP2
CYP8B1
DYRK2
TMEM202
TRMT2A
RANBP1
FEM1A
PCK1
RDH5
SLC36A1
IL7
SEPSECS
AK3
RNF19A
HPR
C2orf88