If a database is inadequate in terms of its description, unclear with respect to the terms of use, or is not downloadable, it may not be fully used, cited or rightly acknowledged by the (research) communities. This is even true for databases with high-quality datasets.
The Life Science Database Archive maintains and stores the datasets generated by life scientists in Japan in a long-term and stable state as national public goods. The Archive makes it easier for many people to search datasets by metadata (description of datasets) in a unified format, and to access and download the datasets with clear terms of use (see here for detailed descriptions).
In addition, the Archive provides datasets in forms friendly to different types of users in public and private institutions, and thereby supports further contribution of each research to life science.
| Database name⇅ | Maintenance site⇅ | Principal creator⇅ | Database classification⇅ | Organism⇅ | Summary⇅ | License⇅ |
|---|---|---|---|---|---|---|
| - | Kakeru Yokoi | Microarray | Bombyx mori |
The reference transcriptomic data from new reference genome data and RNAseq data of multiple tissues in Bombyx mori P50T strain. |
CC BY-SA Detail |
|
| Database Center for Life Scienceopen_in_new | Yuki Naito | Nucleotide sequence | - |
It is the dataset for search in GGGenome, a tool for fast and sensitive search for genomic and transcript sequence. |
CC BY Detail |
|
| National Bioscience Database Center open_in_new | Yuka Tateisi | dictionary | - |
We have made a user dictionary of morphological analysis engine MeCab headwords and synonyms of JST Thesaurus (2015 edition) . |
CC BY Detail |
|
| Database Center for Life Scienceopen_in_new | Hidemasa Bono | Microarray data | - |
AOE is an index of public gene expression database. |
CC BY Detail |
|
| RIKEN Center for Integrative Medical Sciencesopen_in_new | Yoshihide Hayashizaki | Expression | human, mouse, dog, rat, rhesus monkey, chicken |
The database on activities of transcripts and transcription factors in various cell species of human and mouse. |
CC BY Detail |
|
| Database name⇅ | Maintenance site⇅ | Principal creator⇅ | Database classification⇅ | Organism⇅ | Summary⇅ | License⇅ |