ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX748425 | HCT 116
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◢ SRX748420: HCT 116

◣ SRX748425: HCT 116

◢ SRX748426: HCT 116

◢ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX150698: Hep G2

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX702028: hESC HUES64

◢ ERX159250: LoVo

◢ ERX159251: LoVo

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

MIA2
MTRNR2L8
NDUFS1
EEF1B2
PHF12
PPIP5K2
GIN1
RBKS
BABAM2
SKIV2L
NELFE
NEK2
CSTF1
AURKA
C11orf49
SCAF11
CCDC90B
CCDC107
SFRP5
ATXN7L1
POLDIP3
MTRNR2L2
WDR36
CEP152
RTBDN
NR1I3
RABGGTB
KNL1
CD2BP2
ZNF764
ZSWIM3
ACOT8
CDC14B
U2SURP
SNRPA
C19orf54
RPS3A
IST1
RGPD2
RGPD1
POLRMT
IDH1
GFI1B
TSC1
CD86
PRR3
GNL1
SH3D19
EIF1AD
BANF1
RPL27
RAB17
RPS7
SNRPF
EPS15
PIKFYVE
SASH1
CLCF1
FBXW5
C8G
METTL7B
PPP1R37
HRCT1
ZNF383
RPL41
DEAF1
SYT7
MRPS28
ACY1
MAP3K11
OCIAD2
ABLIM1
TBCCD1
TNFRSF10B
GOLGA4
UROS
BCCIP
TAOK3
FCHO2
SAMD1
LARP1
COQ5
DSTYK
SHISA5
C1orf174
OGT
ATP5MC3
LBX2
PRKCSH
CCDC151
STAT3
HNRNPH1
C11orf86
FAM98B
GOLGA8B
ARPIN-AP3S2
ARPIN
RBM27
ZNF219
ZNF564
RAD50
BORCS7
USP37
CNOT9
GLG1
SH3D21
RBIS
PDAP1
BUD31
PAFAH2
SNRPB
DENND5B
MAN2C1
MRPS30
NEURL2
CTSA
KMT5A
PRAP1
TJP3
GUCA2A
INTS12
GSTCD
CREB3L3
KCNMB4
ALG10B
SEC23A
GFM1
ZKSCAN2
PIM3
ADPRHL1
RPL12
LRSAM1
KRTAP5-7
NUDCD1
LSM5
RAB34
ARNT
TMEM181
PSMA5
BAZ1B
EIF4A2
RAB11A
CLASP1
CCNI
SH3BP5L
MKRN3
CENPN
SMARCD2
RCAN1
EPS8L3
TDP2
ACOT13
ATXN2
KDM5A
CCDC77
HEXIM1
TATDN3
NSL1
GDF15
KPNA7
PPP1R13L
RAD51AP1
C12orf4
EPB41L4B
TTI1
RPRD1B
USP16
PAQR4
BIRC2
SYNGR4
PYY
NAGS
TRIP12
FBXO36
LHB
ATF7-NPFF
ATF7
SELENOP
CCDC59
RPL34
LAMTOR5
NFXL1
NUP62
IL4I1
ATF5
PJA2
TRIM15
RPGRIP1L
FTO
RPS29
HERC5
LGALS1
CALM2
SMG7
H4C3
SRSF11
LRRC40
RPS6KA1
MVP
GAB1
AAR2
H4C11
INTS4
PHF14
RBBP5
GALK2
COPS2
ZBTB48
IQCN
KATNBL1
WDR90
BCL6
EPS8
NUCKS1
GPANK1
CSNK2B
SLC41A2
GPR108
BANP
SAXO2
EFL1
DDA1
LAPTM4A
ZNF335
IGSF23
PRRG2
NOSIP
POLG
SLCO2B1
NQO2
UBE2R2
TINAGL1
HYAL2
ETV4
NCSTN
COPA
FBRS
KATNB1
NFATC4
KIF16B
MTFR2
KDM3A
NR2F1
PABPN1
ZNF165
VPS54
ATF4
ZC3H12D
PDE4C
COPB1
NUP107
PTPRG
DEDD2
SELENOI
ADGRF3
GBF1
MAP4K5
ATL1
GCHFR
GPR137
PDE11A
PSD
OPA3
PPP1R12B
TIMMDC1
GBA
PARP2
CALML4
PIPOX
SYT12
SHF
PRDM10
TRUB2
COQ4
TBP
PSMB1
PPP1R9B
MITD1
MMADHC
C12orf57
STK35
H4C12
VTA1
NMBR
TTI2
POT1
RPF2
NR1D1
NME1-NME2
NME1
ALDH2
S100A16
IL32
ITFG2
FBXO33
PKP4
HNF1A
HAAO
VIL1
SLC7A7
PDXP
PINK1
ORC2
KIF21A
PCYT2
PANK1
ZNF567
ACOX2
HADHB
HADHA
NRL
DCAF11
GPR35
ABCC6
AHCY
AP1AR
MGST2
F10
AQP11
RAB37
ACY3
DENND2B
PLEKHG6
AGMAT
SLC19A3
SUCLA2
SMG5
HNMT
AJUBA
IQANK1
FAM83H
ZNF232
PPIL2
VAMP5
NDUFA6
DHRS3
CYP17A1
AHSG
PUS10
PEX13
COPS4
NR0B2
MMACHC
CCDC163
GDI2
SDCBP2
APOB
XYLB
TMEM177
APOA1
TTC31
ANKS4B
SLC45A4
POLD4
TK1
SCARB1
BLOC1S5
FYB2
TCIRG1
KLC4
GSDMD
LOC100129484
TMBIM1
PERP
MCRIP1
HGD
CPPED1
ZNF827
CYB5R3
FASTKD1
CCDC142
ADAP1
IFNGR1
MBNL2
SOS1
NID1
ALKBH7
HSPE1-MOB4
HSPE1
HSPD1
DOK4
F7
SMAGP
GNAL
UBR4
PEPD
APOC3
GNG4
PAK4
MRPL2
WNK4
ZNF214
NLRP14
ABCD3
MGAT1
CFB
CDKN2AIP
PHACTR4
C9orf64
DNMT3A
TRIM14
CA5A
PCGF5
QPRT
C1GALT1
ATP7B
ALG11
SEPTIN9
UCKL1
ATXN7
ZNF184
SH3BGRL2
C3
INHBE
MST1
NEU4
MMP15
CDIP1
DIP2C-AS1
SEC16B
SMYD5
ANXA9
PAAF1
COA4
BCL9L
STX16
MIA3
UBA6
HSD17B11
TUBG1
RETREG3
CACNB2
MTIF2
SARDH
TM4SF5
STK24
BLCAP
SLC2A14
CSNK1A1
CIDEC
PEX11G
MYADM
BRCA1
TMCO1
AMACR
MTMR4
SLC28A1
SPPL2A
CBS
PLXNB1
MYL12B
VTN
TECR
DNAJB1
CBY3
TRAF4
AKAP1
ZNF512B
CRK
GIPC2
CCR6
CPHXL
STARD7
SPATA2
DNAJC22
JMJD1C
SPATS2L
CAMSAP3
RAB32
HMGCS1
CLIC1
TANK
ANKRD40CL
SLC35A3
ISOC1
MSH5
UBA5
CSRNP1
ETFA
AGT
TMEM140
MPND
ANK3
C11orf24
INTS9
HMBOX1
MOGAT3
KIFC3
ENTPD8
LCAT
ASGR2
KRT8
MYO1A
CD99
VEGFA
DDC
SCP2
SOD2
ZFYVE27
SMLR1
POLR2H
ALDH3A2
SEH1L
OTULIN
TACO1
ADD3
ZNF747
TMEM150A
TOGARAM1
KLHL28
GAMT
PGLYRP2
LSM14A
CYP4F3
MRPL20
MOV10L1
GPT
SLC35D1
SLC39A5
GPHA2
DRG2
PRXL2A
FNIP1
MAF1
UGDH
SLC22A23
PGPEP1
TUBG2
C1orf210
GALM
TMEM254
GALK1
CCDC93
NIPSNAP1
SOAT2
CLDN4
EHHADH
ST3GAL6
CCDC146
PTK2B
CRYGC
PALM2AKAP2
C4BPB
ZNF444
CHST13
GSTK1
COMT
ERF
TPT1
FUT5
TCAF1
RFPL2
NPTN
TJAP1
GRTP1
NRSN2
MARK2
ACSL5
STARD4
PRR13
UMPS
PDLIM2
CMPK1
RCL1
POLR3A
RBP5
ZNF696
LIN54
WFDC3
DNTTIP1
GRB7
RNPEP
PGAP3
ERBB2
DDX19B
C2
SOCS5
PKLR
CREBRF
RAP1GAP
ZNF57
METTL8
DCAF17
SENP1
PFKM
STAT5B
TMEM139
MAF
RPS15
EPHX2
MLF2
NGEF
SDHAF1
TMEM256
SDC1
BRIP1
MFN2
NUFIP1
GPALPP1
CEP43
LSM2
MTRNR2L9
THNSL1
HPS5
GTF2H1
PCGF2
CRNKL1
CFAP61
ZBTB8OS
TRMT2A
RBBP4
RANBP1
SCNM1
LYSMD1
CCDC71
ROCK2
CLRN3
PRR5
DYRK2
RSPH14
ASB9
ANKRD26
RIN3
F2
PALM3
CYCS
CES1
MYO1E
RNF149
GLTPD2
MYH7
ASAH1
TP53I3
SLC36A1
FUT10
KCNAB2
GFER
ACAP3
RBM33
NOSTRIN
SLC10A5
CDK5RAP1
DECR2
SLC22A3
HIKESHI
RNF19A
MLLT10
PLXNB2
PPP1R3D
FAM217B
AMN
TMEM71
PHF20L1
LEAP2
ACACB
HINT2
PCK1
SSTR1
FTCDNL1
CYP8B1
POLR1H
BTBD19
IL7
ZFAND2B
SEPSECS
TMEM202
SERPINA1
VPS28
GAB2
DCLRE1C
NR2F2
FEM1A
HPR
SLC22A18
LINS1
ASB7
RDH5
SLC31A1
FKBP15
MIEF1
SURF4
SAXO1
RRAGA
ACO1
AIFM2
NGRN
FDX1
PWP1
BTNL8
CWC25
TFR2
PEF1
C2orf88
AIG1
APOM
TF
PYGL
SMIM11B
SMIM11A
MRPL40
HIRA
LGALS2
TREH
FABP1
ASGR1
N4BP2L1
HBP1
ZSWIM8
CNOT2
LRIG2
FAM185A
APOC2
ZNF343
BPHL
AXL
SLC26A1
LOC110384692
C4B
C4B_2
C4A
CHCHD2
ABCC2
RHBDD1
IRS1
STX18
GRM4
MAP2K3
C19orf12
UHRF1BP1L
ITPK1
ESRRA
TNS3
ORM2
GSTM4
DLC1
PKP2
PYROXD1
AK3
NFATC3
SUOX
UFL1
TWF2
F12
HOXA3
EIF4EBP3
DONSON
BAAT
USP10
PTPA
CRAT
ALG14
SERPINF1
ARL5A
RNF31
PSME2
POMGNT1
DNAJC15
ARHGEF16
TPRN
ACSS2
ORM1
SSUH2
RFX7
ZBED4
MDM2
CYP19A1
RAB30
RFFL
EFNA1
SLC22A9
SLC2A4RG
SORT1
DOK7
STN1
C18orf21
TECPR1
SRSF4
LRP1
CLPB
FGFR4
RBM42
CYB5A
ARMC5
NRBF2
APOBEC1
PHF7
BAP1
AATK
TRIM35
CDK11A
ABAT
ZNF230
SYN3
CYP27A1
IQGAP2
ADGRG7
ZNF529
ETV5
LTV1
DGKD
HEPH
TFDP2
NFE2L2
SLC22A7
CFLAR
WDFY3
NODAL
APOA2
SLC38A10
LIME1
C3orf86
DHRS7B
SCO2
ZFR
LMO7
HP
RASA4B
PTBP1
MRPL24
PTS
B4GALT4
RWDD3
ASPDH
YEATS4
SULT1A4
SULT1A3
PDZK1
FZD5
VCPIP1
C8orf44-SGK3
C11orf91
VANGL1
CCDC68
NSUN5
IL11RA
CHD1
RBMS1
ECI1
ZHX3
TMPRSS4
EMP1
OSBP2
IGF2BP2
ZNF225
FBLN1
BSDC1
SLC30A1
ZNF548
GGCX
ZNF101
SLC51B
SERPIND1
BOLA1
C11orf52
AGPAT1
PROZ
JAML
CX3CL1
SMG8
TOMM70
SERPINC1
LNP1
ENGASE
GSTO1
COX16
MNAT1
MRPS24
RREB1
SECTM1
MEP1A
ATAT1
PLA2G12B
MRPL44
GANAB
ZNF384
SLC19A2
DAO
CLNS1A
NPM2
ACAT2
TLDC2
CLUAP1
CHMP4B
NOP9
DHRS1
ARSB
RMND1
ARMT1
SLC2A8
PLEKHJ1
RSPRY1
MSLN
TYMSOS
TYMS
UTP14C
UGGT2
TSKU
CDK14
SLC25A16
SLC16A3
CLDN19
BDH1
ID1
ACOT7
AMT
PACSIN2
INVS
ERP44
ATXN1
DUSP15
MAOB
GMPPA
RNF5
SLC25A45
CRPPA
AASS
ZBTB4
SH2D5
SEMA3B
POLR2A
ATP5MF-PTCD1
ATP5MF
FAM136A
STK11IP
TYSND1
HDHD3
VARS2
ACOT2
PARP4
PROS1
TCEA2
SP5
CBWD5
SHPK
CTNS
FITM2
PRPF40A
CRLS1
MIIP
RBP4
MUC13
CBWD3
PNPO
KYNU
TOMM40
AP3S2
EPHX1
CMTM8
KIAA2013
PHF5A
ACO2
PCYT1A
GMNN
TMEM19
SNX7
NAP1L4
MAGI1
MASP2
SUSD2
NEDD8-MDP1
NEDD8
GMPR2
DLGAP4
TIA1
MT1F
NAB1
NR1H3
DUSP18
TMEM208
LRRC29
BPIFB2
SLC40A1
IL1RN
CRADD
TMEM115
NUP210
GOLPH3
TMCO2
NUDT16
GLT8D1
TMEM101
RALGPS1
CDC34
LEKR1
IFIT3
MYO7B
EHBP1
CCR1
RHOBTB2
RAB42
DLX2
HNF4A
ZNF223
TSNAXIP1
SF1
RANBP10
NUDT13
TMTC3
CNKSR3
CEP290