ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX702025 | hESC derived mesendodermal cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◢ SRX748420: HCT 116

◢ SRX748425: HCT 116

◢ SRX748426: HCT 116

◢ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX150698: Hep G2

◣ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX702028: hESC HUES64

◢ ERX159250: LoVo

◢ ERX159251: LoVo

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

MIA2
PHF12
CSTF1
AURKA
SELENOP
RAB17
PKP4
LBX2
MTRNR2L8
MVP
HNF1A
SKIV2L
NELFE
ATXN7L1
HAAO
VIL1
SCAF11
KNL1
NEK2
SHISA5
RBKS
BABAM2
ACY1
SLC7A7
MTRNR2L2
PDXP
CCDC107
PINK1
MAP3K11
ORC2
KIF21A
SLCO2B1
PCYT2
CCDC90B
PANK1
NEURL2
CTSA
PABPN1
METTL7B
IST1
NR1I3
TATDN3
NSL1
ZNF567
NDUFS1
EEF1B2
DEAF1
MMADHC
RGPD2
RGPD1
ACOX2
CDC14B
CREB3L3
HADHB
HADHA
NRL
DCAF11
GPR35
ABCC6
SEC23A
AHCY
AP1AR
MGST2
F10
AQP11
RAB37
EPS8L3
ACY3
DENND2B
SH3D19
PLEKHG6
AGMAT
SLC19A3
SUCLA2
ABLIM1
IDH1
SMG5
HNMT
IGSF23
AJUBA
IQANK1
FAM83H
NQO2
ZNF232
PPIL2
VAMP5
DENND5B
NDUFA6
ZNF219
DHRS3
TDP2
ACOT13
CYP17A1
PPIP5K2
GIN1
AHSG
PRKCSH
CCDC151
SRSF11
LRRC40
PUS10
PEX13
COPS4
NR0B2
MMACHC
CCDC163
GDI2
GAB1
FCHO2
SDCBP2
RABGGTB
PSMA5
TRIM15
APOB
XYLB
RPS3A
TMEM177
APOA1
ZC3H12D
TTC31
ANKS4B
BORCS7
SLC45A4
POLD4
TK1
SCARB1
BLOC1S5
FYB2
LARP1
TCIRG1
KRTAP5-7
KLC4
GSDMD
LOC100129484
MAN2C1
ZNF764
TMBIM1
IL32
PERP
MCRIP1
HGD
CPPED1
S100A16
ZNF827
CYB5R3
FASTKD1
CCDC142
ADAP1
IFNGR1
MBNL2
SOS1
NID1
PRAP1
ALKBH7
HSPE1-MOB4
HSPE1
HSPD1
DOK4
F7
SMAGP
GNAL
UBR4
PEPD
TJP3
NR1D1
PDE11A
APOC3
TNFRSF10B
GNG4
PAK4
MRPL2
H4C3
CD2BP2
C1orf174
RAD50
WNK4
ZNF214
NLRP14
ABCD3
HRCT1
MGAT1
CFB
CDKN2AIP
OPA3
PHACTR4
C9orf64
DNMT3A
TRIM14
CA5A
PCGF5
QPRT
C1GALT1
CLASP1
ATP7B
ALG11
SEPTIN9
UCKL1
ATXN7
ZNF184
IQCN
SH3BGRL2
BIRC2
WDR36
C3
ZNF564
INHBE
MST1
NEU4
MMP15
TAOK3
CDIP1
DIP2C-AS1
SEC16B
SMYD5
ANXA9
PAAF1
COA4
BCL9L
STX16
GPR137
MIA3
NUDCD1
UBA6
HSD17B11
TUBG1
RETREG3
CACNB2
MTIF2
SARDH
TM4SF5
STK24
BLCAP
SLC2A14
CSNK1A1
POLDIP3
CIDEC
RBIS
PEX11G
MYADM
BRCA1
TMCO1
AMACR
MTMR4
KMT5A
SLC28A1
SPPL2A
CBS
PLXNB1
MYL12B
VTN
TECR
DNAJB1
CBY3
TRAF4
AKAP1
PRR3
GNL1
ZNF512B
SHF
VTA1
NMBR
CRK
GIPC2
CCR6
CPHXL
STARD7
SPATA2
DNAJC22
JMJD1C
TBCCD1
SPATS2L
MAP4K5
ATL1
CAMSAP3
RAB32
HMGCS1
CLIC1
ZSWIM3
ACOT8
TANK
ANKRD40CL
SLC35A3
SFRP5
ISOC1
MSH5
RPS7
UBA5
CSRNP1
ETFA
AGT
TMEM140
MPND
ANK3
C11orf24
INTS9
HMBOX1
MOGAT3
KIFC3
ENTPD8
LCAT
ASGR2
KRT8
ATXN2
MYO1A
ARNT
CD99
VEGFA
DDC
SCP2
SOD2
ZFYVE27
SMLR1
RCAN1
INTS4
POLR2H
ALDH3A2
RPL34
SEH1L
OTULIN
TACO1
ADD3
ZNF747
TMEM150A
USP37
CNOT9
GDF15
TOGARAM1
KLHL28
GAMT
PGLYRP2
LSM14A
CYP4F3
MRPL20
MOV10L1
GPT
SLC35D1
LAPTM4A
SLC39A5
GPHA2
DRG2
PRXL2A
FNIP1
MAF1
UGDH
SLC22A23
TMEM181
PGPEP1
TUBG2
C1orf210
PPP1R12B
GALM
TMEM254
SELENOI
ADGRF3
GALK1
CCDC93
NIPSNAP1
SOAT2
PHF14
PJA2
CLDN4
EHHADH
ST3GAL6
CCDC146
PTK2B
CRYGC
PALM2AKAP2
KPNA7
C4BPB
ZNF444
SH3D21
CHST13
GSTK1
COMT
ERF
TPT1
FUT5
TCAF1
CD86
RFPL2
NPTN
TJAP1
GRTP1
NRSN2
LAMTOR5
MARK2
ACSL5
ATP5MC3
U2SURP
PIKFYVE
STARD4
PRR13
UMPS
PRDM10
PDLIM2
CMPK1
RCL1
TTI1
RPRD1B
POLR3A
RBP5
ZNF696
LIN54
WFDC3
DNTTIP1
GRB7
RNPEP
PGAP3
ERBB2
DDX19B
C2
SOCS5
PKLR
CREBRF
RAP1GAP
ZNF57
METTL8
DCAF17
SMARCD2
GUCA2A
C11orf49
SENP1
PFKM
STAT5B
ARPIN-AP3S2
ARPIN
TMEM139
MAF
RPS15
EPHX2
SNRPF
MLF2
UBE2R2
NGEF
SDHAF1
TMEM256
SDC1
BRIP1
MFN2
NUFIP1
GPALPP1
CEP43
LSM2
C11orf86
GFM1
MTRNR2L9
THNSL1
SLC41A2
HPS5
GTF2H1
PCGF2
POLRMT
CRNKL1
CFAP61
TBP
PSMB1
ZBTB8OS
TRMT2A
RBBP4
RANBP1
TINAGL1
SCNM1
LYSMD1
CCDC71
ROCK2
CLRN3
SNRPA
PRR5
DYRK2
RSPH14
NUP107
ASB9
ANKRD26
RIN3
F2
PALM3
CYCS
CES1
MYO1E
RNF149
GLTPD2
MYH7
ASAH1
TP53I3
SLC36A1
FUT10
KCNAB2
GFER
ACAP3
RBM33
NOSTRIN
SLC10A5
CDK5RAP1
DECR2
SLC22A3
HIKESHI
RNF19A
MLLT10
PLXNB2
PPP1R3D
FAM217B
AMN
TMEM71
PHF20L1
LEAP2
ACACB
HINT2
CLCF1
CEP152
PCK1
SSTR1
FTCDNL1
GCHFR
CYP8B1
POLR1H
BTBD19
IL7
ZFAND2B
SEPSECS
TMEM202
SERPINA1
VPS28
GAB2
DCLRE1C
NR2F2
FEM1A
HPR
CALML4
SLC22A18
LINS1
ASB7
RPL27
TIMMDC1
RDH5
SLC31A1
FKBP15
MIEF1
SURF4
SAXO1
RRAGA
ACO1
COQ5
AIFM2
NGRN
FDX1
PWP1
BTNL8
CWC25
TFR2
PEF1
C2orf88
KIF16B
AIG1
APOM
TF
PYGL
SMIM11B
SMIM11A
MRPL40
HIRA
LGALS2
TREH
FABP1
ASGR1
N4BP2L1
HBP1
ZSWIM8
FBXW5
CNOT2
C8G
LRIG2
FAM185A
SASH1
APOC2
ZNF343
BPHL
AXL
SLC26A1
EIF1AD
BANF1
LOC110384692
C4B
C4B_2
C4A
CHCHD2
ABCC2
RHBDD1
IRS1
ZNF165
WDR90
TTI2
STX18
RPGRIP1L
GRM4
FTO
HYAL2
MAP2K3
C19orf12
UHRF1BP1L
ITPK1
ESRRA
TNS3
GOLGA4
ORM2
GSTM4
DLC1
PKP2
PYROXD1
AK3
NFATC3
SUOX
UFL1
ETV4
TWF2
F12
HOXA3
EIF4EBP3
DONSON
BAAT
USP10
GPR108
RBBP5
PTPA
CRAT
POT1
ALG14
SERPINF1
ARL5A
RNF31
PSME2
POMGNT1
MTFR2
DNAJC15
ARHGEF16
TPRN
ACSS2
ORM1
SSUH2
RFX7
ZBED4
PAFAH2
MDM2
OCIAD2
CYP19A1
RAB30
RFFL
EFNA1
SLC22A9
SLC2A4RG
SORT1
DOK7
AAR2
STN1
C19orf54
C18orf21
TECPR1
SRSF4
LRP1
CLPB
BAZ1B
FGFR4
KATNB1
RBM42
KDM3A
CYB5A
ARMC5
PIPOX
NRBF2
APOBEC1
PHF7
BAP1
AATK
TRIM35
VPS54
CDK11A
ABAT
ZNF230
SYN3
CYP27A1
IQGAP2
ADGRG7
ZNF529
ETV5
LTV1
DGKD
HEPH
TFDP2
NFE2L2
SLC22A7
CFLAR
WDFY3
NODAL
APOA2
SLC38A10
LIME1
C3orf86
DHRS7B
SCO2
ZFR
LMO7
HP
RASA4B
PTBP1
PIM3
MRPL24
PTS
B4GALT4
SYNGR4
RWDD3
ASPDH
GBF1
YEATS4
SULT1A4
SULT1A3
PDZK1
RPL41
FZD5
VCPIP1
C8orf44-SGK3
C11orf91
VANGL1
CCDC68
NSUN5
IL11RA
CHD1
GFI1B
RBMS1
ECI1
ZHX3
TMPRSS4
EMP1
OSBP2
IGF2BP2
ZNF225
MRPS28
H4C12
FBLN1
BSDC1
SLC30A1
ZNF548
NFXL1
GGCX
ZNF101
SLC51B
SERPIND1
BOLA1
C11orf52
AGPAT1
EPS15
PROZ
JAML
CX3CL1
SMG8
TOMM70
SERPINC1
LNP1
ENGASE
LSM5
GSTO1
COX16
MNAT1
MRPS24
RREB1
SECTM1
MEP1A
BANP
ATAT1
PLA2G12B
MRPL44
EPS8
GANAB
ZNF384
SLC19A2
DAO
CLNS1A
NPM2
ACAT2
TLDC2
CLUAP1
CHMP4B
NOP9
DHRS1
ARSB
RMND1
ARMT1
SLC2A8
PLEKHJ1
RSPRY1
MSLN
TYMSOS
TYMS
ALDH2
MRPS30
UTP14C
UGGT2
PPP1R37
TSKU
FAM98B
CDK14
SLC25A16
SLC16A3
CLDN19
BDH1
ID1
ACOT7
AMT
PACSIN2
INVS
ERP44
ATXN1
DUSP15
MAOB
GMPPA
RNF5
SLC25A45
GPANK1
CRPPA
AASS
ZBTB4
SH2D5
SEMA3B
POLR2A
ADPRHL1
ATP5MF-PTCD1
ATP5MF
FAM136A
STK11IP
TYSND1
HDHD3
VARS2
ACOT2
PARP4
PROS1
TCEA2
SP5
CBWD5
NME1-NME2
NME1
SHPK
CTNS
FITM2
PRPF40A
HERC5
CRLS1
MIIP
RBP4
MUC13
CBWD3
PNPO
KYNU
PTPRG
TOMM40
AP3S2
RPL12
LRSAM1
EPHX1
CMTM8
CSNK2B
SAXO2
EFL1
KIAA2013
PHF5A
ACO2
PCYT1A
GMNN
TMEM19
SNX7
NAP1L4
MAGI1
SNRPB
MASP2
SUSD2
NEDD8-MDP1
NEDD8
GMPR2
DLGAP4
TIA1
MT1F
NAB1
NR1H3
DUSP18
TMEM208
LRRC29
BPIFB2
SLC40A1
IL1RN
CRADD
TMEM115
NUP210
GOLPH3
TMCO2
NUDT16
GLT8D1
TMEM101
RALGPS1
CDC34
LEKR1
IFIT3
CCDC59
USP16
MYO7B
EHBP1
CCR1
RHOBTB2
RAB42
DLX2
HNF4A
ZNF223
TSNAXIP1
SF1
RANBP10
NUDT13
TMTC3
CNKSR3
CEP290
PKIG
ZNF468
TNFAIP8L1
PTGR2
SHPRH
NR2F6
MTARC1
LTBP3
SH3BP2
IL13RA1
HLA-A
AP4S1
ALAS1
YAP1
RPS26
N4BP2
GDPGP1
CIB1
CENPS-CORT
CENPS
CCNI
SLC5A11
AGFG2
LZTS3
RPP40
NIPAL1
CNGA1
TRIP4
IQSEC3
FLVCR2
SECISBP2
IRF5
MAFG
G6PC
STAT3
GCKR
ALDH3B1
SENP3
ELK4
EPS8L2
NR2F1
ALDH5A1
TMEM144
EDEM2
SHTN1
H4C8
CCL20
SP2
NOP16
HIGD2A
SF3B2
MOK
TFPT
PRPF31
BHLHA15
CLSPN
AKR1C4
LOC112577592
IPO4
CCL15
ZNF234
E2F5
RNF121
LOC100133315
ZNF565
ZNF146
WDR81
UNK
HNRNPH1
MTRNR2L6
DCAF6
CAMK1
C1orf115
FBXO33
CDHR5
TMEM242
INTS12
HEATR5A
GSTCD
SYNGR2
SESTD1
FOXJ3
POM121
OCIAD1
GOLGA6L2