ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX748433 | HCT 116
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◢ SRX748420: HCT 116

◢ SRX748425: HCT 116

◢ SRX748426: HCT 116

◣ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX150698: Hep G2

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX702028: hESC HUES64

◢ ERX159250: LoVo

◢ ERX159251: LoVo

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

MIA2
SKIV2L
NELFE
CCDC107
DEAF1
EPS8L2
NR1I3
HRCT1
ATXN7L1
PHF12
CYP17A1
MTRNR2L8
AP1AR
NDUFS1
EEF1B2
CSTF1
AURKA
SFRP5
MAP3K11
C11orf86
ROCK2
ALDH2
RAB17
SCARB1
CLCF1
ACY1
NEK2
PPP1R12B
S100A16
CREB3L3
RAD50
VGLL4
ZC3H12D
IST1
CSNK1A1
GNAL
SLC41A2
SHTN1
LBX2
MTRNR2L2
SH3D19
NGRN
CD86
CCDC90B
C19orf12
PEX11G
C1orf174
SH3D21
ZNF764
SCAF11
RTL10
GNB1L
MPND
USP37
CNOT9
RBKS
BABAM2
GAB1
MIIP
TJP3
TTC31
TNFRSF10B
INTS4
PRMT2
SELENOP
GUCA2A
PIM3
KNL1
TDP2
ACOT13
PGLYRP2
TINAGL1
DCLK1
CCDC142
SEC23A
KRTAP5-7
APOA1
ARNT
ERCC6L
PTS
CLRN3
MAP4K5
ATL1
UBE2R2
BTBD19
TCTEX1D4
INTS9
HMBOX1
POLD4
PEPD
PRKCSH
CCDC151
C10orf90
CDC14B
RFFL
KPNA7
SECTM1
PRR3
GNL1
NOSTRIN
MIA3
CEP152
MIDN
IDH1
PPIP5K2
GIN1
BRCA1
SF1
LGALS1
DKK1
AWAT1
DHRS3
PCYT1A
RGPD2
RGPD1
SLC19A3
GPR137
MSH5
PPP1R37
TMCO1
RBIS
MMACHC
CCDC163
HERC5
SLC7A5
TOGARAM1
KLHL28
ZNF696
SMARCD2
MVP
TMEM82
PABPN1
EIF4E
ABLIM1
SFT2D3
DENND1B
RPS3A
SH3BGRL2
MLLT10
SLC39A6
ARPIN-AP3S2
ARPIN
SYT12
KMT5A
COPS4
LRP1
RCAN1
MSLN
POLRMT
ACOX2
METTL7B
TYSND1
IQCN
PDXP
SLC38A10
SHPK
CTNS
PCGF5
OCIAD2
DKK4
CD2BP2
MCRIP1
PPP1R27
FCHO2
CALML4
BIRC2
YAP1
CPHXL
SAXO1
RRAGA
FASTKD1
MAP2K3
PLEKHJ1
NQO2
HINT2
TTI2
MBNL2
JUND
C11orf24
WDR81
LOC100129484
DENND5B
SLF1
KIAA0825
PRDM10
SH2D5
PANK1
ACSL5
CIDEC
PIKFYVE
PHACTR4
DHRS7B
UBA6
VTN
SDC1
GOLGA4
PACSIN2
BEST3
CLASP1
TAGLN2
STX18
C19orf33
RAB34
MLF2
PYGL
ABHD2
PITPNM1
SNRPF
PPID
SEC16B
PRXL2A
PJA2
SEH1L
TMOD1
COQ5
SLC25A24
IL32
OCIAD1
SHISA5
MFAP4
MXD3
FBXW5
C8G
GNPDA1
TAOK3
MRPS28
LHB
BLCAP
TMEM120A
CREBRF
PPIH
SESTD1
SOS1
PYY
NAGS
PRAP1
CHCHD2
PRDX6
CRPPA
SEMA3B
PRR7
TBP
PSMB1
RPL27
SH3BP5L
CCDC186
DAPP1
NLRP3
BEGAIN
IQSEC2
SHF
PAQR4
BORCS7
SPINT2
MTMR4
IBTK
FAM185A
ADM
SLC25A28
FLVCR2
GUCA2B
SRSF4
ALDH3A2
STK11IP
PPM1D
COMT
SMYD5
EPS8L3
PGAP3
ERBB2
STN1
C9orf85
ABHD17B
ALDH3B1
NAT2
RABGGTB
SELENOI
ADGRF3
SLC26A6
PMS2
AIMP2
TBC1D22A
NUP107
TIRAP
DENND2B
RPL41
ARHGAP12
GPT
PPP2R5B
CNOT6
IGSF23
ZNF225
SF3B5
POLDIP3
RAB37
SMAGP
PHF5A
ACO2
CAPN2
POT1
ARSB
ARPP19
MAFG
RNF212B
KLK6
CMPK1
APOBEC1
SLC25A5
ERICH4
PPP1R9B
TMEM254
SNRPA
C19orf54
POLR2H
MRPS30
BCL9L
PWP1
VPS54
SLC36A1
SRSF5
MXRA7
HMOX1
SRSF11
LRRC40
KDM3A
MRPS7
GGA3
ATXN2
NFXL1
TOMM70
LNP1
PTGR2
HNRNPH1
ZNF565
ZNF146
ETV4
CDC25A
LINS1
ASB7
EMP1
ATP5MF-PTCD1
ATP5MF
CEP128
SLC2A14
PDE11A
U2SURP
ZMAT1
ZNF564
KIF16B
ZNF512B
BAZ1B
RASSF5
TRIM15
RAB30
MED20
BYSL
BPHL
GPR108
NOP9
DHRS1
FHDC1
RTN4
TBX1
KRT8
AP3S2
TRIM14
SLC26A1
G6PC2
NR1D1
VMP1
PTRH2
CEP135
ETFA
FZD5
DLX2
KIFC3
SP2
PSMA5
PHF14
ARHGAP45
RDH5
LSM5
INVS
ERP44
MIGA1
MTHFD1L
OGA
EHD2
AGPAT1
RNF5
USP16
GOLGA8B
CYB5R3
HDHD5
TOMM40
SHFL
GSDMD
AMACR
CLNS1A
SESN1
CEP57L1
VTA1
NMBR
BAAT
SAXO2
EFL1
NCSTN
COPA
NQO1
MMADHC
NUDCD1
NMT1
DCAKD
RFT1
PINK1
VAMP5
SERPINA1
NRL
DCAF11
MGST2
DCLRE1C
MTFR2
ASAH1
RNF121
LOC100133315
RBM8A
ISCA1
RNPEP
GPCPD1
PERP
NAP1L4
ZNF708
ASF1B
LRIG2
GPANK1
CSNK2B
BHLHA15
ADGRA3
FDXACB1
C11orf1
RTKN
CISD3
OGFOD2
MAN2C1
NPTN
TTI1
RPRD1B
HDHD3
MAP1LC3B2
PDE4C
SLC50A1
ADPRHL1
AURKB
KCNMA1
CLPP
ACY3
TPT1
PPP1R15B
APOA2
ELK4
SLC35A2
TMEM94
XBP1
PACS1
LEKR1
NIBAN2
ALKBH7
ST3GAL6
GPR107
TACC2
C3orf52
KIF21A
IL13RA1
ADAR
ZNF230
RPLP2
CLPX
BLOC1S5
QTRT2
CCDC191
RPL34
ZNF286A
LRRC6
SREBF2
CLDN4
CEP85
ZBTB43
OLFM2
GMPPA
PDSS2
OTULIN
RPGRIP1L
FTO
TTC14
STK19
DXO
ANKRD40CL
GGCX
PTPRG
TCAF1
TMEM71
PHF20L1
PGM1
MRPL24
HSD17B11
RRAS
FDX1
CDK11A
OPA3
SASH1
RMND1
ARMT1
AMT
RPS6KA1
ARHGAP10
CCR7
SOD2
CYCS
ALG14
SLC5A11
KRTAP5-10
PRKCI
LRP10
RPS27A
CLHC1
ASXL1
PPFIA3
C19orf73
H4C3
GFM1
HBP1
NADK
NDRG1
IFNGR1
CCNI
TCP1
MRPL18
AGTRAP
VPS26B
NCAPD3
TUFT1
SLC16A5
HPS5
GTF2H1
SDHD
ZNF827
ZNF747
LAPTM4A
RPS15
ABCC2
RASL10B
CXCL9
RNF125
CTH
HNMT
GDF15
TRAF4
C11orf52
CRADD
CD68
PPIL2
FYB2
NAT1
HSD3B1
ZNF184
SLC25A45
DNAJC14
ACADVL
NUP62
IL4I1
ATF5
RB1CC1
BCL2L15
LLPH
FAM136A
TXNRD1
WDR36
NFE2L2
SLC28A1
RBM33
NR2F1
MCC
KATNB1
PPME1
C2CD3
ISG20
LAMA3
GMNN
ESCO2
LOC100289561
TMCC3
EPHX2
ISL2
MOV10L1
ACIN1
C14orf119
RBMXL1
KYAT3
PPP1R3D
FAM217B
SENP3
ZDHHC9
POLR1H
SCOC
CDH3
WDR43
RSPH14
RBM7
C11orf71
SMARCE1
BTNL3
TIGD4
ARFIP1
ARHGEF2
TTC12
ACSL1
TBC1D23
BET1
NAA80
HYAL3
TRIM6-TRIM34
TRIM6
TMEM102
LOC101928841
HEPH
LDAH
AP1M1
LMNB1
MCM3
UBR4
CDC14A
CFAP299
ANKRD13A
TRPC4AP
MSANTD3
LARP1
TBCCD1
ZSWIM8
SMIM29
PDGFB
DNAJB11
SULT1A4
SULT1A3
MT1F
ABCD4
SLC39A4
CTNNA1
KCNJ11
SLC35A3
ECSIT
UFD1
CDC45
RABGAP1L
MGAT1
ZBTB8OS
RBBP4
SUOX
UFSP1
PMVK
WBP1L
DRG2
CRNKL1
CFAP61
ATAT1
GABARAPL1
PRAG1
CRK
HIKESHI
SLC2A8
CLDN19
CCNG1
MTIF2
RPS19
HNRNPD
TIAL1
CAPS2
MICAL1
TREH
CCNL1
TTC39C
AQP3
EPN2
JMJD1C
ZNF181
NME1-NME2
NME1
TEN1
ACOX1
STARD5
GFER
HPCAL1
ATP5MC3
KATNBL1
MAP1LC3C
ZNF219
HSPE1-MOB4
HSPE1
HSPD1
ZNF687
RNF114
SLC39A7
RXRB
LAMTOR5
RBM25
RBSN
ALCAM
GPKOW
RTN4RL2
MIEF1
PARP4
PEX16
EMC4
VWA7
PEX6
TMEM256
SHBG
SAT2
BAZ2A
C15orf39
C2orf78
FZR1
PUS10
PEX13
TRIP12
FBXO36
NT5DC1
ATP8B3
CLDN2
AXL
HDAC7
GULP1
SERF2
TANK
BRIP1
POC1A
ZNF639
FAM169A
PC
FAM162A
CCDC58
STAMBPL1
PEX2
SCARA5
CYBA
MYL12B
SEC24C
OSBPL7
TGFBRAP1
SPATA12
IFT88
HMCN1
BCL7B
GOT1
PRR5
TYMSOS
TYMS
DDX41
SS18L2
DAP
EDN3
TMC4
DNTTIP2
SORD
DEPDC7
CCNT1
C12orf57
UBA5
UFL1
SPRED2
SLC26A11
SGSH
ZNF41
SNRPB
MGAT4B
ZC3H18
FDPS
DUSP3
LBHD1
C11orf91
YOD1
SF3B6
FAM228B
NIP7
COG8
TBC1D31
PGS1
XPNPEP3
ST13
NHLRC2
DCLRE1A
TIMMDC1
PIPOX
ZNF548
UGGT2
ATF4
ACADM
NSMCE3
MAT2B
PFDN4
NPC1
PEBP1
SMAD7
PHLPP1
TIPRL
CCDC71L
CBY3
TACO1
FBXL19
GSK3A
IMMT
EFNA2
RIN1
TMEM53
ARMH1
PSMD10
ATG4A
PNKD
DCTN2
NCEH1
SEPTIN9
HTRA2
STK40
ETS2
ZNF346
MTRNR2L9
BOD1
CYB5B
MTRF1L
UMPS
NUFIP1
GPALPP1
GANAB
GLT8D1
UBE4A
DNPEP
SKA2
PRR11
RRNAD1
ISG20L2
NDUFA6
SCNM1
LYSMD1
AIFM2
ZNF343
DQX1
DAGLB
NELFB
GM2A
PRCP
DDIAS
MRPL42
CCDC71
EPS15
MAOB
NAGPA
MRPS22
RPF2
ABHD16A
GLRX
SLCO2B1
TECR
DNAJB1
PRELID2
BCR
RFPL2
PTP4A1
EMSY
PKMYT1
SUCO
ING1
INHBE
EIF4EBP3
LYPD1
PYROXD1
TSNAXIP1
RANBP10
HMGA2
ASB9
RBM42
BOLA1
STAT6
MYDGF
PAK4
POMGNT1
YEATS4
ABCF3
PTK2B
TRIM35
PRICKLE1
AK3
TMEM9
ARHGDIB
RFX2
GTF3C2
ZBTB7C
TTC6
FOXA1
DAXX
PKD1L2
NOP16
HIGD2A
PLSCR1
UBN2
HSD17B8
MUS81
ATAD1
SCP2
BSDC1
TMEM218
DMXL1
FAM221B
CPA4
NOTCH2NLC
MSANTD4
BZW2
AP3B1
ELMOD2
FOSL2
UCN2
SECISBP2
RTBDN
ZFAND5
EIF2AK3
POGLUT3
PGPEP1
H4C8
MS4A10
MANF
CEACAM20
IL4R
FOS
INTS7
DTL
ARL4A
SAMD1
STT3A
UPF3B
TUBB3
PMEL
GXYLT2
CDK2
BRI3
USP42
RFC3
TAF6L
KIAA1109
TUBAL3
PCNX4
FCRLB
PKP4
CKMT1A
MRPS23
ECH1
GCDH
SOCS2
LARS1
HAUS4
PDCD6
SBF2
LINC02210-CRHR1
ZSWIM3
ACOT8
LSM14A
AATK
LIME1
ULK4
UQCRC2
CDX2
VEPH1
ERCC1
METTL8
DCAF17
DECR2
GCHFR
TNPO3
PACRGL
ASTE1
EIF1AD
BANF1
ARL5A
WDR12
CARF
C2orf49
USP40
RGMB
PPP1R14B
MOSPD1
HDDC3
B4GALT4
MON1A
SHC1
CKS1B
ETFDH
C4orf46
DUSP6
TEAD4
AMPD3
TMEM181
CWC22
PIK3CB