ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX026267 | Caco-2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◣ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◢ SRX748420: HCT 116

◢ SRX748425: HCT 116

◢ SRX748426: HCT 116

◢ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX150698: Hep G2

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX702028: hESC HUES64

◢ ERX159250: LoVo

◢ ERX159251: LoVo

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

PHF12
CSTF1
AURKA
MIA2
SLCO2B1
SLC7A7
BTNL8
HNF1A
SELENOP
PKP4
RPS7
PCYT2
KIF21A
PLEKHG6
VIL1
CACNB2
ADAP1
RPS3A
SHISA5
APOC3
ACY3
STARD4
ACOX2
WDR36
IGSF23
AHCY
ACOT7
TATDN3
NSL1
ADGRG7
ZNF567
SLC51B
F7
DENND2B
SEH1L
MVP
PANK1
CDK5RAP1
LBX2
RBKS
BABAM2
MRPL44
STX16
LOC100129484
AMACR
ORC2
JMJD1C
VAMP5
SDHAF1
POLDIP3
PINK1
HAAO
KNL1
EHBP1
HIKESHI
CREB3L3
ZNF214
NLRP14
VTN
C11orf49
DIP2C-AS1
GSDMB
TMBIM1
SCAF11
F10
APOB
BRCA1
ACY1
CLPB
TCEA2
NEK2
TANK
MGST2
APOA1
ANKRD40CL
TMEM181
PLEC
PARD3B
SUCLA2
TACO1
CYP17A1
CWC25
MYADM
ABLIM1
BORCS7
LGALS2
RAB17
LSM14A
HGD
TMEM208
LRRC29
MMADHC
PHF14
SH3D19
SLC45A4
BLOC1S5
TNFAIP1
IFT20
MCRIP1
ZNF827
PRAP1
NDUFS1
EEF1B2
SELENOI
ADGRF3
NUDT13
EIF1AD
BANF1
SSTR1
COX16
RAB37
PLXNB2
CCDC107
KMT2D
ZNF529
AP2S1
MRPL16
RBM42
SIAE
PPIP5K2
GIN1
CCDC90B
POLD4
CDC14B
U2SURP
TECR
DNAJB1
MYL12B
AP1AR
NPAS4
SMG5
GNAL
SLC22A23
CAMSAP3
MRPL48
DHRS3
NDUFS7
SMAGP
PABPN1
KMT5A
TRIP4
CISD1
CPHXL
CNOT2
AHSG
TJP3
STK24
AJUBA
RBBP5
TMEM115
PEPD
CCR6
ESRRA
MAPKAPK5
MGAT1
ST3GAL6
SMG8
IFTAP
TMEM254
ZNF564
SKIV2L
NELFE
SPATA2
SMARCD2
MBNL2
TMPRSS4
RGL1
ARPC5
TBCCD1
NDUFS3
KBTBD4
TUT1
TNFRSF10B
CTSB
CLIC1
CCDC146
IFNGR1
STARD7
IQANK1
FAM83H
DECR2
DNASE1
DDX23
NUF2
ANK3
GSTK1
IST1
SPATS2L
DDC
EHHADH
APOA2
BOD1
DSTYK
RBM33
B4GALT4
SCP2
PRR5
VPS54
AQP11
TYSND1
PTK2B
PAK4
NPC1L1
ZNF219
NR0B2
NR1D1
GPR137
FAM149B1
ECD
METTL7B
DOK4
NOSTRIN
CHMP4B
NCEH1
ZNF165
BANP
ZNF487
TMEM92
WDR24
SLC23A3
GTF3C3
FRA10AC1
TDP2
ACOT13
FASTKD1
H4C3
CRNKL1
CFAP61
PPIL2
SEC16B
BMF
C1orf174
MMP15
OPA3
GRTP1
TMEM242
BCL7B
USP30
APOM
TFEC
AP3S2
SURF4
PRKCSH
CCDC151
BCL9L
MAP3K11
RPL34
LRP2
INTS4
DYNC1I2
GNG4
ZMAT1
TAOK3
RHOBTB2
TCIRG1
CD99
AAR2
PRRG2
NOSIP
CSTF2T
PDXP
GAMT
SLC10A5
SEC23A
MARK2
KBTBD6
YJU2
NPRL2
CYB561D2
TFPT
PRPF31
ZNF747
WNK1
N4BP2L1
AATK
NDUFA6
SOCS5
HNMT
TMEM71
PHF20L1
SUPV3L1
UBA5
CLNS1A
C1orf210
PLA2G12B
NIPAL1
CNGA1
APBB1
INHBE
PPP1R12B
ALPI
ZNF205
TMCO1
ACSL1
C17orf75
SRC
AGMAT
ANXA9
CLDN4
SCNM1
LYSMD1
ISY1-RAB43
ISY1
GPR35
DFFA
SOS1
TMEM86B
TOMM40
ZNF223
ZNF576
IRGQ
NSUN5
UPB1
NEURL2
CTSA
HSPE1-MOB4
HSPE1
HSPD1
AKAP1
MRPL20
IFRD2
ZFYVE1
ANAPC5
PPRC1
COPS7B
PAFAH2
TRIM15
UBA6
SEPSECS
UNK
KRT8
PUS10
PEX13
OTULIN
HEPACAM
MMACHC
CCDC163
BMS1
HADHB
HADHA
COPS4
PPP1R3D
FAM217B
KLC4
CPPED1
DDA1
NDUFA2
IK
TRMT2A
RANBP1
TMEM144
KATNB1
SLC39A5
COMT
CREBRF
KIAA1217
RPS19
RAB32
KRR1
TMEM109
DENND5B
SPHK2
RPL18
ABCC6
MAP4K5
ATL1
MYO1A
RPL12
LRSAM1
WDR46
PFDN6
JRK
FDX1
HNF1B
COMMD3-BMI1
COMMD3
GPANK1
CSNK2B
CACNA1G
RDH5
TMTC3
CEP290
CXCL2
KCNK10
GBA
GOLT1A
PEMT
TIMM22
RABGGTB
ATXN7
HSD17B11
GFER
TM9SF4
BRPF3
FYB2
PAAF1
COA4
NOP16
HIGD2A
CCDC59
SELENOH
HK1
NR2F2
FAM98B
DRG2
PRDM10
WDPCP
MDH1
PJA2
H4C12
SLC25A16
NFKBIZ
GDI2
GSDMD
ARNT
ZFYVE27
MRPS16
SUGCT
MPLKIP
DNMT3A
ATP5MC3
RNPEP
CDC34
PRR3
GNL1
RALGPS1
HMGCS1
EPHX2
EMP1
ZNF225
MED23
SLC22A18
GRM4
TMEM101
RTEL1
ABCC9
ATXN7L1
C4BPB
NUP107
ZNF461
ASAH1
TECPR1
GSTO1
MEP1A
AS3MT
GRWD1
IGFL4
CIDEC
ALAS1
EDEM2
IQGAP3
MRPL21
IGHMBP2
BSDC1
TOMM70
LNP1
SHANK2
KATNBL1
AXL
AP1M1
ZNF232
PEX11G
TRAF4
NUFIP1
GPALPP1
NODAL
TBC1D16
MITD1
RPL29
GATB
RFXANK
BORCS8
MRPS18C
HELQ
MTRF1
AGT
GFM1
PEX3
ADAT2
GALM
ZSWIM1
EIF3F
PIAS1
NOP14
GRK4
EPS8L3
SLC2A14
MRPL40
HIRA
CCDC57
BIRC2
CDIP1
FAM185A
FGFR4
UTP14C
COX7C
XYLB
MTIF2
PALM2AKAP2
PIKFYVE
FOXJ3
PARG
PRPF40A
RPS26
SEC22B
SLC35B1
ZNF764
CEP43
NFXL1
BUB1B
NCOA4
CFAP97D1
NDUFC2-KCTD14
NDUFC2
ABCC2
HDHD3
ZNF155
RGN
NR2C1
PDZK1
TSNAXIP1
RANBP10
NDUFAF5
ESF1
CDC25A
HSP90B1
MAN2C1
SOAT2
CLRN3
RAB11A
INO80B
PRCC
SCAF1
SLC25A53
BBS1
TCAIM
NID1
CCDC71
DLC1
GMPPA
RASSF9
RSPRY1
MT1F
ZNF770
TAF11
HSPH1
SMG7
ZNF862
CTU1
SOD2
RCAN1
TTI1
RPRD1B
COQ5
ACAT2
LUC7L2
FMC1-LUC7L2
FBXL19
FMC1
MTMR9
ERCC6L2
NUP214
METTL8
DCAF17
PWP1
RBP2
RRP15
SMLR1
NEDD8-MDP1
NEDD8
GMPR2
C19orf53
RPS6KB2
LARP1B
ERF
CRADD
WDR81
CDHR5
RPTOR
NDUFAF1
FUBP3
MTRNR2L2
HPS5
GTF2H1
GAB2
SP5
DNAJC11
AMBRA1
EMSY
BTRC
LRIG2
EPS15
INTS12
GSTCD
ABCF2
MRPS15
AMN
FAM136A
ALG10B
VIPAS39
USP48
AHSA1
RNF128
RAB11FIP1
ELP3
CENPS-CORT
CENPS
SP2
MAP1LC3B2
SYT7
SNRPF
TEFM
FUT2
BAIAP2L2
KIF3B
TOR1AIP1
SSNA1
ANAPC2
TRIM46
KRTCAP2
STX18
HNF4A
SLC17A5
TOB2
PDE11A
TCOF1
KDM5A
CCDC77
DMAP1
RPS3
TMEM139
NME1-NME2
NME1
RAD51AP1
C12orf4
ZSWIM3
ACOT8
RBP5
FEM1A
GBF1
RRN3
DENR
FAM168A
CLSTN3
POLR3F
DZANK1
ZNF302
DPP3
ZNF512B
ADD3
F2
UNKL
DHX33
CRK
SLC19A2
ALG10
NOL12
CYP19A1
TSKU
COASY
MRPS34
EME2
C15orf39
KMT5B
CSRNP1
POLR2H
SENP1
PFKM
MRPL24
ZNF408
ARHGAP1
MRPL3
SCT
ANKS4B
SHF
NSA2
GFM2
C1orf109
ASXL1
MRPS31
IGFL2
PGPEP1
RNF121
LOC100133315
ARHGDIB
TMEM184A
ARPIN-AP3S2
ARPIN
TP53I3
LEAP2
INTS5
UBQLN4
LAMTOR2
ZNF28
CALCOCO1
KAT7
STK31
EXD2
MYL3
ZNF532
CSNK1A1
PRR13
ACAP3
ALG14
APOBEC1
SSBP1
TMEM41A
CFB
QPRT
BLCAP
SECISBP2
A1CF
TM9SF2
PES1
MIA3
ZFR
JAML
YAP1
ZBTB45
ZNF224
GALK2
COPS2
DCP1A
MRPL39
ADM
ARHGEF12
ALKBH7
CDK11A
TRUB1
C2orf49
FABP1
WDR90
BET1
PCYT1B
SCML4
ZNF444
DUSP15
NR1H2
ZBTB40
ATF7IP
CCDC141
DENND1A
HYAL2
PHF7
BAP1
ATP5F1D
POLR1H
SLC31A1
FKBP15
UBE4A
SIRT4
VILL
VPS28
PKIG
MOK
HDAC7
COMMD2
CCND1
BNIP1
SAP18
C1GALT1
ISOC1
FNIP1
SNRPA
HAX1
ZFP91
LPXN
IQSEC3
M6PR
KLRG1
NPPB
ZFAND2B
RPGRIP1L
FTO
ZNF181
RBM8A
WASHC2A
PROSER1
NHLRC3
BAZ1B
PHB2
USPL1
HMGB1
PNLIPRP1
SNX27
MAF
POLRMT
YEATS4
POM121
TXNDC9
EIF5B
WDR11
GID8
DIDO1
CLDND1
TK1
PERP
TOGARAM1
KLHL28
SORT1
GMNN
PATZ1
LPIN3
SPRY4
SMPD3
TRUB2
COQ4
GRB7
CYCS
CFLAR
TRIM14
CHCHD2
POT1
CYREN
CCDC93
ECI1
BOLA1
CLYBL
TREML1
HSD17B4
NFIA
ADH6
TMPRSS13
TCAF1
CDK12
SLC33A1
INTS1
MYO1E
PAQR4
RBSN
SLC35A3
TLCD2
DDX41
TIMM9
KIAA0586
UMPS
RPL27
SCO2
ATXN1L
SLC26A1
ZFYVE19
DNAJC17
RIC8B
TTC31
CCDC142
WNK4
TPT1
LARS1
SF3A3
KANSL3
CES1
FBLN1
KCTD7
GARS1
MTA1
KLHL20
MLST8
RBM7
C11orf71
CCP110
AGTRAP
VPS50
HEPACAM2
PHB
SLC25A6
ABT1
DNAJC15
ZBED4
LMO7
TAS1R1
NOL9
GFI1B
TMCO2
DCAF6
ZC3H10
NFE2
SYT8
PSMA5
VTA1
NMBR
RSPH14
ANKRD40
TSSC4
ZNF485
CUBN
SETX
ZNF140
EPN3
ACSL5
ZNF230
SLC35A2
ZSCAN25
NDUFA9
AKAP3
TBL3
METRNL
FAAP20
GGNBP2
AQP10
CD2BP2
UCKL1
TMEM150A
BTBD19
STYXL1
FOXP1
DEDD2
P2RY6
LEKR1
PHF1
SMYD5
ENTPD8
GDF15
CRPPA
ZNF235
SLC25A28
TMEM199
POLDIP2
TOP3B
SNAI1
CPSF1
ABRAXAS2
DCT
ACO1
KIF16B
HBP1
MAP3K7
PHF5A
ACO2
SNRPB2
GAB1
EPS8
MST1
ASB9
MRPL55
AHCYL2
NAGPA
ZC3H12D
RAB30
NR1H3
SEMA4G
PDZD3
DPP4
LAPTM4A
GGCX
CCR1
ARMH3
CLDN23
ATG101
PGBD4
EMC7
CRYGC
TTI2
WDR74
ZSCAN22
ZNF419
IDH1
SNX17
EIF2B4
ANKRD13A
GLTPD2
C19orf54
STAT3
LIN37
CFAP20
ASPA
RPS11
GC
GEMIN6
PSEN1
FCHO2
LIN54
ZBTB8OS
RBBP4
GDPGP1
CIB1
UROS
BCCIP
TMEM43
CHCHD4
ZGPAT
ARFRP1
FAM200A
PPP6R1
GSK3A
BOD1L1
FAM111B
ATXN1
NQO2
SESN1
CEP57L1
NFE2L2
NPTXR
ELOC
CEP170B
ZNF226
MRPS22
KPNB1
SLC22A11
MTRNR2L8
NR1I3