ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX748426 | HCT 116
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◢ SRX748420: HCT 116

◢ SRX748425: HCT 116

◣ SRX748426: HCT 116

◢ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX150698: Hep G2

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX702028: hESC HUES64

◢ ERX159250: LoVo

◢ ERX159251: LoVo

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

KNL1
SKIV2L
NELFE
NDUFS1
EEF1B2
MTRNR2L8
MTRNR2L2
MIA2
NEK2
PHF12
WDR36
RGPD2
RGPD1
ZSWIM3
ACOT8
SFRP5
CSTF1
AURKA
SNRPA
C19orf54
PPIP5K2
GIN1
SLC41A2
SH3D21
NR1I3
POLDIP3
RPS3A
PRR3
GNL1
LBX2
ATP5MC3
KDM3A
RPL34
PRKCSH
CCDC151
SMG8
C11orf49
ARNT
TTC31
SASH1
UBE2R2
ABLIM1
RPL41
UROS
BCCIP
NLRX1
TAOK3
MVP
CCNI
RPL27
RBBP5
RABGGTB
PJA2
SCARB1
PRKCI
SH3D19
SNRPF
PSMA5
NR2F2
S100A16
SELENOI
ADGRF3
PRDM10
CD86
ZNF696
KCNMB4
IDH1
TJP3
PHACTR4
BORCS7
RTBDN
MMACHC
CCDC163
CCDC90B
IQCN
PHF14
RAB17
CHCHD2
ACY1
CD2BP2
RNF121
LOC100133315
TRIP12
FBXO36
PEX11G
TMEM71
PHF20L1
CSNK1A1
EIF4A2
ATXN7L1
RAD51AP1
C12orf4
U2SURP
USP37
CNOT9
ZC3H12D
LUC7L2
FMC1-LUC7L2
FMC1
SAXO2
EFL1
CCDC107
SLC25A5
PWP1
COX16
ARPIN-AP3S2
ARPIN
ABHD2
SHISA5
CREB3L3
VPS54
MLF2
SCNM1
LYSMD1
NDUFAB1
GPANK1
CSNK2B
SAMD1
FBXW5
C8G
ALG14
CPHXL
MAP4K5
ATL1
RCAN1
KPNA7
ALDH3A2
LSM5
RPS26
RAD50
SCP2
VPS26B
NCAPD3
FCHO2
IGSF23
KRTAP5-7
KATNB1
MGST2
NPTN
ZBTB8OS
RBBP4
GPR108
METTL7B
CYP17A1
HINT2
PAK4
RDH5
PPP1R9B
TMCO1
DKK1
EIF3F
EIF1AD
BANF1
ZNF165
RNF114
HRCT1
SWSAP1
SH2D5
RAB11A
TYSND1
RPS6KA1
ADPRHL1
PPP1R37
FDXACB1
C11orf1
TDP2
ACOT13
TTI2
POLD4
GNAL
SEPSECS
INO80B
H4C3
CLASP1
WDR74
GAB1
NR1D1
STAT6
GPR137
WDPCP
MDH1
UFSP1
PDXP
MED20
BYSL
SELENOP
PKP4
HNF1A
HAAO
VIL1
SCAF11
RBKS
BABAM2
SLC7A7
PINK1
MAP3K11
ORC2
KIF21A
SLCO2B1
PCYT2
PANK1
NEURL2
CTSA
PABPN1
IST1
TATDN3
NSL1
ZNF567
DEAF1
MMADHC
ACOX2
CDC14B
HADHB
HADHA
NRL
DCAF11
GPR35
ABCC6
SEC23A
AHCY
AP1AR
F10
AQP11
RAB37
EPS8L3
ACY3
DENND2B
PLEKHG6
AGMAT
SLC19A3
SUCLA2
SMG5
HNMT
AJUBA
IQANK1
FAM83H
NQO2
ZNF232
PPIL2
VAMP5
DENND5B
NDUFA6
ZNF219
DHRS3
AHSG
SRSF11
LRRC40
PUS10
PEX13
COPS4
NR0B2
GDI2
SDCBP2
TRIM15
APOB
XYLB
TMEM177
APOA1
ANKS4B
SLC45A4
TK1
BLOC1S5
FYB2
LARP1
TCIRG1
KLC4
GSDMD
LOC100129484
MAN2C1
ZNF764
TMBIM1
IL32
PERP
MCRIP1
HGD
CPPED1
ZNF827
CYB5R3
FASTKD1
CCDC142
ADAP1
IFNGR1
MBNL2
SOS1
NID1
PRAP1
ALKBH7
HSPE1-MOB4
HSPE1
HSPD1
DOK4
F7
SMAGP
UBR4
PEPD
PDE11A
APOC3
TNFRSF10B
GNG4
MRPL2
C1orf174
WNK4
ZNF214
NLRP14
ABCD3
MGAT1
CFB
CDKN2AIP
OPA3
C9orf64
DNMT3A
TRIM14
CA5A
PCGF5
QPRT
C1GALT1
ATP7B
ALG11
SEPTIN9
UCKL1
ATXN7
ZNF184
SH3BGRL2
BIRC2
C3
ZNF564
INHBE
MST1
NEU4
MMP15
CDIP1
DIP2C-AS1
SEC16B
SMYD5
ANXA9
PAAF1
COA4
BCL9L
STX16
MIA3
NUDCD1
UBA6
HSD17B11
TUBG1
RETREG3
CACNB2
MTIF2
SARDH
TM4SF5
STK24
BLCAP
SLC2A14
CIDEC
RBIS
MYADM
BRCA1
AMACR
MTMR4
KMT5A
SLC28A1
SPPL2A
CBS
PLXNB1
MYL12B
VTN
TECR
DNAJB1
CBY3
TRAF4
AKAP1
ZNF512B
SHF
VTA1
NMBR
CRK
GIPC2
CCR6
STARD7
SPATA2
DNAJC22
JMJD1C
TBCCD1
SPATS2L
CAMSAP3
RAB32
HMGCS1
CLIC1
TANK
ANKRD40CL
SLC35A3
ISOC1
MSH5
RPS7
UBA5
CSRNP1
ETFA
AGT
TMEM140
MPND
ANK3
C11orf24
INTS9
HMBOX1
MOGAT3
KIFC3
ENTPD8
LCAT
ASGR2
KRT8
ATXN2
MYO1A
CD99
VEGFA
DDC
SOD2
ZFYVE27
SMLR1
INTS4
POLR2H
SEH1L
OTULIN
TACO1
ADD3
ZNF747
TMEM150A
GDF15
TOGARAM1
KLHL28
GAMT
PGLYRP2
LSM14A
CYP4F3
MRPL20
MOV10L1
GPT
SLC35D1
LAPTM4A
SLC39A5
GPHA2
DRG2
PRXL2A
FNIP1
MAF1
UGDH
SLC22A23
TMEM181
PGPEP1
TUBG2
C1orf210
PPP1R12B
GALM
TMEM254
GALK1
CCDC93
NIPSNAP1
SOAT2
CLDN4
EHHADH
ST3GAL6
CCDC146
PTK2B
CRYGC
PALM2AKAP2
C4BPB
ZNF444
CHST13
GSTK1
COMT
ERF
TPT1
FUT5
TCAF1
RFPL2
TJAP1
GRTP1
NRSN2
LAMTOR5
MARK2
ACSL5
PIKFYVE
STARD4
PRR13
UMPS
PDLIM2
CMPK1
RCL1
TTI1
RPRD1B
POLR3A
RBP5
LIN54
WFDC3
DNTTIP1
GRB7
RNPEP
PGAP3
ERBB2
DDX19B
C2
SOCS5
PKLR
CREBRF
RAP1GAP
ZNF57
METTL8
DCAF17
SMARCD2
GUCA2A
SENP1
PFKM
STAT5B
TMEM139
MAF
RPS15
EPHX2
NGEF
SDHAF1
TMEM256
SDC1
BRIP1
MFN2
NUFIP1
GPALPP1
CEP43
LSM2
C11orf86
GFM1
MTRNR2L9
THNSL1
HPS5
GTF2H1
PCGF2
POLRMT
CRNKL1
CFAP61
TBP
PSMB1
TRMT2A
RANBP1
TINAGL1
CCDC71
ROCK2
CLRN3
PRR5
DYRK2
RSPH14
NUP107
ASB9
ANKRD26
RIN3
F2
PALM3
CYCS
CES1
MYO1E
RNF149
GLTPD2
MYH7
ASAH1
TP53I3
SLC36A1
FUT10
KCNAB2
GFER
ACAP3
RBM33
NOSTRIN
SLC10A5
CDK5RAP1
DECR2
SLC22A3
HIKESHI
RNF19A
MLLT10
PLXNB2
PPP1R3D
FAM217B
AMN
LEAP2
ACACB
CLCF1
CEP152
PCK1
SSTR1
FTCDNL1
GCHFR
CYP8B1
POLR1H
BTBD19
IL7
ZFAND2B
TMEM202
SERPINA1
VPS28
GAB2
DCLRE1C
FEM1A
HPR
CALML4
SLC22A18
LINS1
ASB7
TIMMDC1
SLC31A1
FKBP15
MIEF1
SURF4
SAXO1
RRAGA
ACO1
COQ5
AIFM2
NGRN
FDX1
BTNL8
CWC25
TFR2
PEF1
C2orf88
KIF16B
AIG1
APOM
TF
PYGL
SMIM11B
SMIM11A
MRPL40
HIRA
LGALS2
TREH
FABP1
ASGR1
N4BP2L1
HBP1
ZSWIM8
CNOT2
LRIG2
FAM185A
APOC2
ZNF343
BPHL
AXL
SLC26A1
LOC110384692
C4B
C4B_2
C4A
ABCC2
RHBDD1
IRS1
WDR90
STX18
RPGRIP1L
GRM4
FTO
HYAL2
MAP2K3
C19orf12
UHRF1BP1L
ITPK1
ESRRA
TNS3
GOLGA4
ORM2
GSTM4
DLC1
PKP2
PYROXD1
AK3
NFATC3
SUOX
UFL1
ETV4
TWF2
F12
HOXA3
EIF4EBP3
DONSON
BAAT
USP10
PTPA
CRAT
POT1
SERPINF1
ARL5A
RNF31
PSME2
POMGNT1
MTFR2
DNAJC15
ARHGEF16
TPRN
ACSS2
ORM1
SSUH2
RFX7
ZBED4
PAFAH2
MDM2
OCIAD2
CYP19A1
RAB30
RFFL
EFNA1
SLC22A9
SLC2A4RG
SORT1
DOK7
AAR2
STN1
C18orf21
TECPR1
SRSF4
LRP1
CLPB
BAZ1B
FGFR4
RBM42
CYB5A
ARMC5
PIPOX
NRBF2
APOBEC1
PHF7
BAP1
AATK
TRIM35
CDK11A
ABAT
ZNF230
SYN3
CYP27A1
IQGAP2
ADGRG7
ZNF529
ETV5
LTV1
DGKD
HEPH
TFDP2
NFE2L2
SLC22A7
CFLAR
WDFY3
NODAL
APOA2
SLC38A10
LIME1
C3orf86
DHRS7B
SCO2
ZFR
LMO7
HP
RASA4B
PTBP1
PIM3
MRPL24
PTS
B4GALT4
SYNGR4
RWDD3
ASPDH
GBF1
YEATS4
SULT1A4
SULT1A3
PDZK1
FZD5
VCPIP1
C8orf44-SGK3
C11orf91
VANGL1
CCDC68
NSUN5
IL11RA
CHD1
GFI1B
RBMS1
ECI1
ZHX3
TMPRSS4
EMP1
OSBP2
IGF2BP2
ZNF225
MRPS28
H4C12
FBLN1
BSDC1
SLC30A1
ZNF548
NFXL1
GGCX
ZNF101
SLC51B
SERPIND1
BOLA1
C11orf52
AGPAT1
EPS15
PROZ
JAML
CX3CL1
TOMM70
SERPINC1
LNP1
ENGASE
GSTO1
MNAT1
MRPS24
RREB1
SECTM1
MEP1A
BANP
ATAT1
PLA2G12B
MRPL44
EPS8
GANAB
ZNF384
SLC19A2
DAO
CLNS1A
NPM2
ACAT2
TLDC2
CLUAP1
CHMP4B
NOP9
DHRS1
ARSB
RMND1
ARMT1
SLC2A8
PLEKHJ1
RSPRY1
MSLN
TYMSOS
TYMS
ALDH2
MRPS30
UTP14C
UGGT2
TSKU
FAM98B
CDK14
SLC25A16
SLC16A3
CLDN19
BDH1
ID1
ACOT7
AMT
PACSIN2
INVS
ERP44
ATXN1
DUSP15
MAOB
GMPPA
RNF5
SLC25A45
CRPPA
AASS
ZBTB4
SEMA3B
POLR2A
ATP5MF-PTCD1
ATP5MF
FAM136A
STK11IP
HDHD3
VARS2
ACOT2
PARP4
PROS1
TCEA2
SP5
CBWD5
NME1-NME2
NME1
SHPK
CTNS
FITM2
PRPF40A
HERC5
CRLS1
MIIP
RBP4
MUC13
CBWD3
PNPO
KYNU
PTPRG
TOMM40
AP3S2
RPL12
LRSAM1
EPHX1
CMTM8
KIAA2013
PHF5A
ACO2
PCYT1A
GMNN
TMEM19
SNX7
NAP1L4
MAGI1
SNRPB
MASP2
SUSD2
NEDD8-MDP1
NEDD8
GMPR2
DLGAP4
TIA1
MT1F
NAB1
NR1H3
DUSP18
TMEM208
LRRC29
BPIFB2
SLC40A1
IL1RN
CRADD
TMEM115
NUP210
GOLPH3
TMCO2
NUDT16
GLT8D1
TMEM101
RALGPS1
CDC34
LEKR1
IFIT3
CCDC59
USP16
MYO7B
EHBP1
CCR1
RHOBTB2
RAB42
DLX2
HNF4A
ZNF223
TSNAXIP1
SF1
RANBP10
NUDT13
TMTC3
CNKSR3
CEP290
PKIG
ZNF468
TNFAIP8L1
PTGR2
SHPRH
NR2F6
MTARC1
LTBP3
SH3BP2
IL13RA1
HLA-A
AP4S1
ALAS1
YAP1
N4BP2
GDPGP1
CIB1
CENPS-CORT
CENPS
SLC5A11
AGFG2
LZTS3
RPP40
NIPAL1
CNGA1
TRIP4
IQSEC3
FLVCR2
SECISBP2
IRF5
MAFG
G6PC
STAT3
GCKR
ALDH3B1
SENP3
ELK4
EPS8L2
NR2F1
ALDH5A1
TMEM144
EDEM2
SHTN1
H4C8