ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX748434 | HCT 116
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◢ SRX748420: HCT 116

◢ SRX748425: HCT 116

◢ SRX748426: HCT 116

◢ SRX748433: HCT 116

◣ SRX748434: HCT 116

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX150698: Hep G2

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX702028: hESC HUES64

◢ ERX159250: LoVo

◢ ERX159251: LoVo

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

MIA2
MTRNR2L8
SKIV2L
NELFE
CCDC107
PHF12
NEK2
DEAF1
NR1I3
ATXN7L1
CLCF1
NDUFS1
EEF1B2
C11orf86
CSTF1
AURKA
MAP3K11
CYP17A1
HRCT1
MTRNR2L2
SLC41A2
FCHO2
SFRP5
AP1AR
CREB3L3
S100A16
KPNA7
SCARB1
RAB17
TDP2
ACOT13
GNAL
INTS4
CCDC90B
ACY1
ROCK2
SYT12
POLD4
CDC14B
C19orf12
PEX11G
ZNF764
TJP3
USP37
CNOT9
RBKS
BABAM2
DHRS3
TNFRSF10B
ABLIM1
PIM3
TINAGL1
BAAT
SLC38A10
SHTN1
UBE2R2
ZC3H12D
SH3D21
GUCA2A
ARNT
KMT5A
PPP1R12B
RAD50
CD86
IST1
SECTM1
SH3D19
RPS3A
MAP4K5
ATL1
GAB1
MPND
ALDH2
ZNF696
GOLGA4
PRMT2
KRTAP5-7
RASSF5
NGRN
KNL1
CEP152
TOGARAM1
KLHL28
SLC39A6
ERCC6L
ZNF219
MTMR4
NQO2
PABPN1
LHB
LBX2
SESTD1
ZNF564
METTL7B
DENND5B
SH2D5
C10orf90
SEC23A
PRDM10
SH3BP5L
MLLT10
TTC31
CCDC142
CREBRF
ALDH3A2
MCRIP1
ARPIN-AP3S2
ARPIN
SDC1
VGLL4
PPP1R27
MVP
OCIAD2
PCYT1A
DENND1B
SPINT2
RGPD2
RGPD1
SELENOP
SLC19A3
PDE11A
SLC7A5
VTN
MGST2
PYY
NAGS
PRAP1
MIA3
SF1
CHCHD2
IGSF23
BIRC2
MMACHC
CCDC163
MLF2
PRR7
BAZ1B
MAFG
IQCN
DCLK1
SHISA5
PIKFYVE
PRR3
GNL1
SCAF11
MIDN
CLASP1
NUDCD1
BORCS7
MIIP
SRSF11
LRRC40
GPR137
C11orf24
C19orf33
CCDC186
CD2BP2
IL32
POLRMT
DHRS7B
EPS8L3
RFFL
APOA1
PLEKHJ1
RAB34
HERC5
RBIS
MXD3
TTI2
GFM1
FAM185A
COPS4
MBNL2
PERP
SH3BGRL2
MOV10L1
TIRAP
MTFR2
DKK4
SHPK
CTNS
VWA7
EMP1
NR1D1
MSLN
SMYD5
CRPPA
PTS
SOD2
SLC25A28
PPM1D
PPP1R9B
TMEM71
PHF20L1
PYGL
MFAP4
PDXP
RABGGTB
BEST3
FHDC1
IDH1
INTS9
HMBOX1
TBC1D23
UBR4
C1orf174
PANK1
TRIM14
DKK1
CDK11A
PPP1R15B
BLCAP
SMARCD2
SLCO2B1
PGLYRP2
NOSTRIN
RPL41
PACSIN2
CPHXL
RCAN1
HPS5
GTF2H1
COQ5
SOS1
NCSTN
COPA
PEPD
CLRN3
ISL2
MRPS30
APOBEC1
WDR81
ERICH4
RPL34
GPT
UGDH
TBP
PSMB1
CSNK1A1
TTI1
RPRD1B
BTBD19
TCTEX1D4
GABARAPL1
NIBAN2
ZNF512B
UFL1
HNMT
PPIP5K2
GIN1
MSH5
ACSL5
U2SURP
CIDEC
SEMA3B
PITPNM1
HMOX1
POMGNT1
SELENOI
ADGRF3
CMPK1
ETV4
LRP1
HSPE1-MOB4
HSPE1
HSPD1
TMEM254
HINT2
YAP1
CDC25A
PHACTR4
AGPAT1
RNF5
KLC4
MRPL2
CLK2
ACOX2
CHMP4B
ACSL1
AWAT1
CNOT2
LINS1
ASB7
PARP4
BLOC1S5
BRCA1
STN1
NFXL1
FDXACB1
C11orf1
HDHD5
RPS15
CLNS1A
ARHGAP45
ALKBH7
RAB30
BEGAIN
TIMMDC1
SLF1
KIAA0825
MICAL1
PPIH
ABCC2
ACIN1
C14orf119
KIF16B
SRSF4
TAGLN2
TRIM6-TRIM34
TRIM6
VPS54
PPP2R5B
TMEM17
PJA2
RPGRIP1L
FTO
STX18
G6PC2
ABHD2
ATP5MC3
PRXL2A
SFT2D3
SNRPF
ARPP19
ASAH1
RNF125
DAPP1
SLC26A6
PTGR2
SMARCE1
CRK
PRKCSH
CCDC151
DCLRE1C
IBTK
TBX1
RPL27
PHF5A
ACO2
SCARA5
ARHGAP10
TRIM15
KATNB1
KIF21A
SLC31A1
FKBP15
USP16
CCNI
FLVCR2
HNRNPH1
OGFOD2
RAB37
ZNF184
PELO
ITGA1
TRPC4AP
RFX2
MMP20
RFT1
STK40
GOLGA8B
MTIF2
SUCO
TAOK3
LSM14A
TOMM70
LNP1
POT1
PAQR4
TCP1
MRPL18
LRRC6
OGA
KRT8
PRR5
SMIM14
NEURL2
CTSA
PWP1
CEP128
RBM7
C11orf71
PRDX6
STAT6
EPS8
PDSS2
POLR2H
SAXO2
EFL1
NRL
DCAF11
PSMA5
SLC26A1
MAP2K3
MRPS28
TOMM40
CYB5R3
PCGF5
RNF114
LARP1
LAPTM4A
CDC14A
TMOD1
UGGT2
RBM8A
CISD3
CAPS2
ZBTB20
ARHGAP12
SLC50A1
CLPX
UBN2
POLDIP3
SAXO1
RRAGA
AP3S2
PPID
MYL12B
MTRNR2L9
SP2
PTP4A1
ISCA1
GM2A
NR2F1
KATNBL1
USP36
NQO1
TRAF4
PPP1R37
TYSND1
RNF169
CLDN4
FAM169A
NUP107
FBXW5
C8G
BOLA1
LAMA3
NOP9
DHRS1
MAP1LC3C
ZNF230
CAPN2
SLC28A1
KIFC3
CFLAR
ZNF747
FZD5
UQCRC2
RB1CC1
IFNGR1
PUS10
PEX13
SECISBP2
RNF212B
NIP7
COG8
CCNL1
PPME1
C2CD3
GPANK1
CSNK2B
LGALS1
ESCO2
SNRPA
ZSWIM8
C19orf54
HEPH
CCDC93
CCDC71
CEP85
BCL2L15
ATAD1
SHF
H4C12
C11orf52
USP3
SGPP1
ZSWIM3
ACOT8
ZNF181
SMU1
MANF
TTC39C
ZNF860
OSBPL10
HSCB
CHEK2
CDH3
ANKRD40CL
PRAG1
FASTKD1
TUBG1
RETREG3
FDX1
CD68
VMP1
PTRH2
EMC4
ULK4
CNOT6
CCNH
TBC1D31
MGAT4B
SLC2A14
STK11IP
SEC24C
DAP
OSBPL7
TMCO1
BHLHA15
TEN1
ACOX1
PRPF40A
TMEM9
GTF3C2
S100A2
ZFYVE16
METTL8
DCAF17
SUOX
APOA2
GGCX
CLUAP1
PTPRG
ALDH3B1
HSD17B14
PRKCI
NUFIP1
GPALPP1
ZNF384
ADGRA3
CYCS
KCTD7
RTKN
SLC25A24
PDGFB
VPS26B
NCAPD3
MT1F
ADAR
HADHB
HADHA
DQX1
SERPINA1
HPCAL1
FBXL19
H4C11
OSR2
EIF4EBP3
ZNF225
ANKRD13A
WBP1L
SLC35A2
RTN4
ST7
RTP3
SCP2
RBM33
THADA
MRPS21
TMEM181
VIRMA
EIF4E
QTRT2
CCDC191
UFSP1
TATDN3
NSL1
SLC25A45
HTRA2
ASF1B
EHD2
POLR1D
LNX2
HBP1
ETS2
PTK2B
TPT1
TRIM35
FAM136A
GUCA2B
BRIP1
PNPO
CD46
KIF20A
BRD8
ST3GAL6
CCNG1
C9orf85
ABHD17B
TIAL1
PACS1
SMC3
HSD17B11
ARSB
NAGPA
IQSEC2
SMIM13
SLC35A3
CALML4
ZNF460
NDRG1
PDE4C
MXRA7
SKA2
PRR11
PRPF8
UBE2D3
OTULIN
PPP1R3D
FAM217B
RPS6KA1
EFNA2
DCTN2
THOC2
INHBE
EPN2
MRPL24
SYNGR4
GBF1
HDHD3
LEKR1
TMEM14C
UPP1
ECH1
BCAP29
MMADHC
OCIAD1
SF3B5
FAM161B
COQ6
CXCL9
PKP2
VCPIP1
C8orf44-SGK3
TTC14
TMBIM6
SMAGP
AMT
NME1-NME2
NME1
TMEM82
RBM27
AQP3
RGMB
SEC16B
MSL2
SLC39A7
RXRB
NDST1
VAMP5
NOLC1
ASB9
LRP10
PGM1
ZNF827
ISG20
CTH
ZNF576
IRGQ
MCC
MAOB
HAUS4
KLK6
AHCYL1
GALM
ALG14
ADPRHL1
DUS2
DDX28
ATF4
POLD3
RFC3
TLNRD1
MUS81
VIM
TMTC3
CEP290
POC1A
HSPA5
RAB11B
BLOC1S2
VTA1
NMBR
MED20
BYSL
KRTAP5-10
ZBTB43
COMT
SNRPB
RGL1
ARPC5
SERP1
EIF2A
PEX6
RMND1
ARMT1
TIMM10
KRT80
EIF1AD
BANF1
ARL4A
LRIG2
HSD17B8
SGMS2
PGAP3
ERBB2
C16orf70
C2orf49
PPP1R13L
PKP3
HIKESHI
GPR108
URB1
AFG1L
BPHL
DNAJC14
TIGD4
ARFIP1
CEACAM20
FAM83E
C11orf91
SLC16A5
TMEM256
SORD
ZNF286A
CCNT1
PCM1
EIF2AK3
ZNF823
VIL1
C11orf65
RNF121
LOC100133315
CCR7
NPTN
BSDC1
PSMB4
NADK
ZNF449
RSPH14
NMT1
DCAKD
KIAA1109
SREBF2
MGAT5B
DNAJB5
UFD1
CDC45
CYBA
LDAH
ANKRD13B
NDUFB6
EED
ZNF639
PEF1
OPA3
LOC100289561
HLA-A
LIN37
POLR3A
PKP4
HNF1A
HAAO
SLC7A7
PINK1
ORC2
PCYT2
ZNF567
GPR35
ABCC6
AHCY
F10
AQP11
ACY3
DENND2B
PLEKHG6
AGMAT
SUCLA2
SMG5
AJUBA
IQANK1
FAM83H
ZNF232
PPIL2
NDUFA6
AHSG
NR0B2
GDI2
SDCBP2
APOB
XYLB
TMEM177
ANKS4B
SLC45A4
TK1
FYB2
TCIRG1
GSDMD
LOC100129484
MAN2C1
TMBIM1
HGD
CPPED1
ADAP1
NID1
DOK4
F7
APOC3
GNG4
PAK4
H4C3
WNK4
ZNF214
NLRP14
ABCD3
MGAT1
CFB
CDKN2AIP
C9orf64
DNMT3A
CA5A
QPRT
C1GALT1
ATP7B
ALG11
SEPTIN9
UCKL1
ATXN7
WDR36
C3
MST1
NEU4
MMP15
CDIP1
DIP2C-AS1
ANXA9
PAAF1
COA4
BCL9L
STX16
UBA6
CACNB2
SARDH
TM4SF5
STK24
MYADM
AMACR
SPPL2A
CBS
PLXNB1
TECR
DNAJB1
CBY3
AKAP1
GIPC2
CCR6
STARD7
SPATA2
DNAJC22
JMJD1C
TBCCD1
SPATS2L
CAMSAP3
RAB32
HMGCS1
CLIC1
TANK
ISOC1
RPS7
UBA5
CSRNP1
ETFA
AGT
TMEM140
ANK3
MOGAT3
ENTPD8
LCAT
ASGR2
ATXN2
MYO1A
CD99
VEGFA
DDC
ZFYVE27
SMLR1
SEH1L
TACO1
ADD3
TMEM150A
GDF15
GAMT
CYP4F3
MRPL20
SLC35D1
SLC39A5
GPHA2
DRG2
FNIP1
MAF1
SLC22A23
PGPEP1
TUBG2
C1orf210
GALK1
NIPSNAP1
SOAT2
PHF14
EHHADH
CCDC146
CRYGC
PALM2AKAP2
C4BPB
ZNF444
CHST13
GSTK1
ERF
FUT5
TCAF1
RFPL2
TJAP1
GRTP1
NRSN2
LAMTOR5
MARK2
STARD4
PRR13
UMPS
PDLIM2
RCL1
RBP5
LIN54
WFDC3
DNTTIP1
GRB7
RNPEP
DDX19B
C2
SOCS5
PKLR
RAP1GAP
ZNF57
C11orf49
SENP1
PFKM
STAT5B
TMEM139
MAF
EPHX2
NGEF
SDHAF1
MFN2
CEP43
LSM2
THNSL1
PCGF2
CRNKL1
CFAP61
ZBTB8OS
TRMT2A
RBBP4
RANBP1
SCNM1
LYSMD1
DYRK2
ANKRD26
RIN3
F2
PALM3
CES1
MYO1E
RNF149
GLTPD2
MYH7
TP53I3
SLC36A1
FUT10
KCNAB2
GFER
ACAP3
SLC10A5
CDK5RAP1
DECR2
SLC22A3
RNF19A
PLXNB2
AMN
LEAP2
ACACB
PCK1
SSTR1
FTCDNL1
GCHFR
CYP8B1
POLR1H
IL7
ZFAND2B
SEPSECS