ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039042 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◣ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2A
RABL2B
ZNF335
PSMD1
MAPKAPK5
DYNC1LI2
NME6
SUDS3
PSMG2
CEP76
IPO13
POLR3F
DZANK1
CACTIN
VTI1B
NVL
NUP205
NCLN
TBCK
AIMP1
HADHB
HADHA
EFTUD2
CCDC103
NUP85
SRD5A1
RPL21
POLR2E
TSNAX
DCTN1
RWDD1
REXO1
STAM2
MRPS7
GGA3
HSPA9
ID2
HOXA2
VDAC2
SLC35B1
FARSB
SKP1
STAM
LYRM4
FARS2
EXOSC5
BCKDHA
GOSR2
VARS1
BBS9
MRPS5
IRGQ
ZNF576
UPF2
TSN
PAK1IP1
C6orf52
PSMD12
RPS23
ATP6AP1L
DPH6
ATP5MG
GOLGA5
CAPRIN1
EIF4ENIF1
C19orf48
IQCG
RPL35A
SEC61B
ALG2
SMC2
TTC8
PES1
RBKS
BABAM2
BLCAP
TM9SF1
COMMD1
CCT4
COX7A2L
PI4KB
RBBP5
ACTR10
PNO1
TMED1
SUPV3L1
NDUFA4
USP1
ZRANB2
ISCU
SART3
RBPJ
FAM104A
C17orf80
ANAPC7
PDAP1
BUD31
OSGEP
APEX1
ICE1
ADK
AP3M1
SELENOF
HS2ST1
RABGGTB
XPNPEP3
ST13
UFM1
ZFHX3
PROSER1
NHLRC3
RPS27A
CLHC1
CLGN
PCBP1
LTBR
SCNN1A
RPS12
PTK2B
C12orf29
ZGPAT
ARFRP1
ZNF608
CDC42EP3
NEO1
PTGES2
SF3B3
COG4
PAF1
NSUN6
ARL5B
TLE2
PDE12
VANGL2
BAG6
NR2F1
HEXIM2
RBMS3
GATA4
GABRB2
MYRIP
CCNDBP1
HEY2
MRTO4
EMC1
GADD45GIP1
MBD2
NDUFA10
KCNIP4
EIF2S3
ACOT2
RPS29
LRR1
SLC30A4
ST7
ZNF383
MSX2
DIAPH3
ZNF746
SUCLG1
ARHGEF10L
LAMA3
HES1
CABIN1
CDC73
SEMA3E
ST18
TNK2
SKIL
DDX39B
BNIP3
RPL7
RDH10
CACYBP
PDHX
APIP
KAT6B
TBX2
SEC11C
LIN28A
RARA
TXNRD1
FREM2
ARHGAP11A-SCG5
ARHGAP11A
PIN4
TBC1D9
GORAB
HOXA1
OAZ3
MRPL9
ZFHX4
FOXP1
FMN1
TTI2
CDS1
PCBD2
PCDH15
SLC25A6
SMAGP
MGP
PRUNE2
SERTAD2
CNPY2
MKRN2
GTDC1
ARAP2
SPCS1
GLT8D1
ALKBH5
GTF3C4
DDX31
NDUFB3
FAM126B
FRRS1
CNR1
MET
EPM2A
RSRC1
CXXC4
ATOH1
GPR108
RPS10-NUDT3
RPS10
USP17L15
NDUFS7
TAF9
RAD17
AK6
RPN1
GFRA1
NLGN1
ZNF395
TNFRSF19
CCDC59
KDM3A
OTUD7B
INKA2
IL20
SPAG17
RARG
DONSON
MYZAP
GCOM1
TIGD1
EIF4E2
TMEM70
BNIP2
ZNF341
SPIN1
GEMIN2
TMEM106B
PRTG
ID1
SLITRK6
DHRS3
MRPL34
ABHD8
B3GNT5
HOXA4
EIF3D
ACKR3
MEIS2
POGLUT3
DENR
SLC25A53
CFAP69
SCOC
STK36
RNF25
KMT2A
MAPRE1
TMPRSS11F
POLR3A
LIX1
MCU
REC8
CYP26A1
RUNX1T1
ELOVL6
ATXN2
PEX14
LMO1
ACOT1
NEFH
SEPTIN2
HDLBP
REL
RNF207
IPMK
CISD1
BRWD1
OSGIN2
COX5A
KAT6A
NELFA
CTF1
RABGAP1L
FGD3
C16orf91
USP34
APLN
SEMA6D
NXPH4
SHB
ADM
UBE2I
CALM2
H2BC5
ZNF385B
VPS33B
HUS1
ADAMTSL4
EOMES
PDHB
MYADM
TCF7
PRKD1
IGFBP2
SMARCD2
RBBP8NL
DNMBP
SPATC1L
CCDC174
PHIP
ZNF507
CS
YTHDF2
PDE4D
MIGA1
IMMP1L
ELP4
CRABP2
PXMP2
POLE
TSC1
GFI1B
STX19
SRSF11
LRRC40
KANSL3
ATXN1L
TRPM7
PCLO
TPRA1
EBAG9
ZBTB17
SSBP2
OTUD4
SYNJ2BP-COX16
SYNJ2BP
CLCN3
ACYP1
ZC2HC1C
COQ5
HSPA4L
UFSP1
DUSP9
EIF4H
TBX3
PDCL3
LOC100287896
LIPT2
MGST1
NR2C2
CBWD5
CBWD3
CBWD6
HNRNPD
ZDHHC17
ACBD6
ACTR3B
RILPL1
CDKL2
QPRT
FAM168B
RPRM
POU2F1
DLAT
TMSB4Y
TMPRSS12
SH2B1
CBX3
HNRNPA2B1
MTF2
UROS
BCCIP
ITGAV
VEPH1
CYP51A1
PRKAG2
PDE4DIP
SLC40A1
TLE4
GTF2IRD2B
KCNH1
NEUROG1
SORBS2
TANC2
LSM8
YEATS2
IMPA1
PRR13
IGF2BP3
KLHL32
MELTF
KCNS3
TMPPE
GLB1
MEMO1
GPRC5A
CEP70
EML5
BCAS2
TCHP
CCNC
JAK1
FANCL
RASSF6
BAG2
MTMR10
RTL6
POLR2J3
TAF1A
C2CD5
GGH
PCTP
STX18
PEX2
NCBP3
NRDE2
IFI16
PYDC5
ZNF3
MTMR2
MPP5
PTGES3
SFT2D2
CNOT10
CCDC102A
HOXA3
PXYLP1
UBE2V2
ZBED9
SNX3
TCF4
BIRC6
EID2
GPR37
SPECC1
ID3
EPHA6
NEUROG2
PIP4K2B
ATXN7L2
RIMS1
PALLD
BAMBI
EYA1
PARP4
CMSS1
USP12
SLC36A4
FILIP1L
PLIN2
COLEC12
FAM110A
PLEKHD1
C6orf136
NEK3
RAB11FIP2
CMTR1
ZNF384
TBC1D5
PLS1
CAPZA2
BCAP29
SULT1A1
RYBP
TTK
EFCAB2
ARHGEF5
PHACTR2
IFT22
SCAP
VWA8
PELI2
SBF2
RAI14
ZSCAN12
CRPPA
PPP1R13B
INPP5A
TXNDC11
KMT5C
DRAM1
ARL14EP
NUTM2E
EIF5
FAM162A
CCDC58
MRPS36
PIGU
SRSF10
ERCC6L2
WDR11
CEP41
SEMA4B
RHOBTB1
PIK3R1
FSTL3
C15orf61
ADAMTS7
NR2C1
MARCHF6
ANKRD36C
MGST2
JMJD1C
GDF6
ATP6V0A4
NT5DC3
NEUROG3
VEZT
FGD6
PMAIP1
BICRA
ANKLE2
SP5
ANK2
INSM1
MALRD1
MRPL38
RBBP7
GADD45G
RARB
GRSF1
KAZALD1
ARSG
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
PRDM12
HOXB4
RASSF2
FLOT1
DUSP6
INAFM2
BFSP1
SH3BP2
AXDND1
RNF149
UPF3A
METTL11B
RGS12
LPIN1
MTRNR2L2
MTRNR2L8
DSCAML1
HSPA1B
ARID5A
SP2
PARK7
CCPG1
C15orf65
RPS6KA1
SEC14L1
HOXC5
C11orf24
KCNAB2
ARHGAP24
SLCO4C1
GRHL3
CCDC88A
NADK
STK38
NCOA2
FGFRL1
VOPP1
KLF17
NBEAL2
SKIV2L
NELFE
NKD1
CPSF4L
LPCAT3
MTMR4
BIN2
FGR
DIAPH1
CDCA7L
NBPF1
ZNF76
MEF2C
CAMTA1
USP15
WNT10B
LNPEP
DENND2D
DDX3X
PRDM10
POR
TBC1D8
ZCCHC3
NFKBIA
IQCH
AAGAB
CD38
TRAF4
ING1
VAV1
HEBP2
ATP23
PNKD
CNOT2
PCNA
RASSF5
OTX1
SPACA1
EXOSC4
MINDY2
IQGAP2
HES3
PKN2
CLDN2
PPIB
PDPN
PLCB2
NKIRAS1
IFRD2
H6PD
NDFIP2
HMGCS1
PRDM1
CFD
SLC35E2B
HESX1
TBRG4
HIBADH
ARIH2
PLEKHO2
NR1D2
RNF139
JAK3
SH3TC1
CYCS
ZDHHC4
PKM
CCDC114
ZNF740
CSAD
SP7
DYNLL1
GTF3A
SOD2
PIK3AP1
DPP9
CLIC4
CBFA2T3
KCTD6
AKIRIN1
ADCY7
PRSS56
KIF26A
DTNB
DGKZ
SLC35E2A
RBL2
HOXB3
HES5
SRPRA
FCHSD2
TMEM222
SSX2IP
FAF2
ARHGEF1
CASC3
CD164
USP3
CTTN
SLC39A13
KIF21B
ANKRD13D
TRMT6
MCM8
RMND5A
CSRNP1
MRPS24
TRERF1
SNAPC3
BAZ1B
LAPTM5
USP42
NOTCH2NLA
ARHGAP4
UNC13D
SLC10A2
SBNO2
CLTC
PIP4P2
MAP2K1
MAD1L1
KCNH2
IL21R
PPCDC
MTCH1
DGAT2
CENPH
ZNF25
RNF125
ATG16L2
RASGRP2
PEAK3
THRAP3
MRPS31
ZNF503
CDX1
GFRA3
NOTCH2NLC
PKDCC
ZSWIM6
RAD50
PIKFYVE
SDE2
ARL4A
UROD
HECTD3
PSMD3
LRIG3
FBXO41
SMPD1
ZNF414
RFESD
ADAM17
RXRA
STRADA
KEAP1
RWDD2A
PGM3
CPVL
CHN2
MC1R
MTRF1L
WTAP
LSM5
MAGEF1
ERLIN2
RCOR1
NIBAN3
SERPINB1
PRKDC
MCM4
PANK2
ZNF318
ASNS
USPL1
HMGB1
PEX3
ADAT2
ATAD3B
UBL7
DYNLT1
VPS37C
C1orf159
TUBB
FXYD2
HOXD3
NOTCH2
OR2L13
MAST2
GPATCH8
NGRN
FAM120B
RNF103-CHMP3
PNRC2
PHF19
MAPKAPK3
CISH
TIGD5
EEF1D
RER1
MORN1
UPP1
ARF3
C18orf32
HOXC6
BUD13
IFNGR1
NIBAN2
DDX23
FAM227B
FABP5
DTWD1
NCBP2AS2
NCBP2
ATAD3A
USP21
NOTCH2NLB
LRCH4
FBXO24
KIF1C
INCA1
KMT5A
CYB5R4
HPF1
DENND1A
TDP2
CNOT6
BHLHE40
ACOT13
JAKMIP1
NINJ2
RAP1GAP2
NUDT15
ARHGAP45
SYPL1
NANP
YY1AP1
DAP3
C12orf65
UBE2L3
RIMBP3C
RIMBP3B
ARHGEF18
PCMT1
AVL9
CDS2
NMNAT1
LZIC
CEP135
ASB1
SLC7A5
MYCBP2
TSPAN4
POLR2L
ATG5
APBB1IP
CCNL1
SEH1L
PTDSS1
MTERF3
MFN2
ZCCHC24
GSPT1
ITPRIP
KRI1
C21orf91
SNUPN
LTB4R
LANCL2
UNK
ADORA2A
HYLS1
HOXC4
SREBF2
TRAP1
PSMF1
HMGCL
MEPCE
MTMR1
ZNF219
RPLP1
RITA1
DDX54
GFER
ASH1L
GTF2H3
EIF2B1
BRAT1
CTSC
DISP3
TLE3
TAS1R1
NOL9
UBIAD1
FDX1
CD63
TMEM199
POLDIP2
MAPK6
THUMPD3
DLX2
FNTA
NAA40
SLC16A6
LAMP1
MT2A
KDM1A
NOC4L
DDX51
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
DUSP4
ARHGAP27
ARF4
ZFAND2A
MBD6
PDZD2
NREP
CARMIL1
BRAP
ACAD10
ATOH8
IL6R
POLD2
FKBP1A
ACVR1
EIF1B
LONRF3
PGD
RPS3
ZCWPW1
PGLS
RPL8
ATG101
TKFC
DDB1
SGK1
MDM2
HNRNPF
CHST11
RCOR3
RIMBP3
GARS1
TMEM65
CDC42
FAF1
DNAH7
RAN
DYNC2H1
CSNK1A1
BOD1L1
GFUS
CNPY3
TRDMT1
GALE
LCOR
DHRS4L2
DHRS4
WBP1L
DNAJB2
SPRY2
SMIM20
NCKAP5L
SMG6
RERE
FKBP5
EHD1
SPPL2A
UBE2K
PPIL4
MRPL20
DENND4B
C6orf89
ABHD12
RCC2
ZBTB45
POLG
SNAPC5
NEURL2
CTSA
PPP4R3B
TPP2
CCDC43
TBL3
ZC3H6
GPCPD1
RAC2
CBX5
PRKAB1
IPP
NUS1
ELMO1
FOS
RBSN
B3GALNT2
MACROH2A1
TMEM41A
SLC35A1
PTP4A2
CD93
TAF12
RAB11FIP1
INTS5
PSTPIP1
CLN5
MRPS28
ZNF593
RNF19A
RGS14
MTCH2
LRRC59
C1orf232
THYN1
RNF216