ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039038 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◣ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2B
RABL2A
ZNF335
PSMD1
MAPKAPK5
CACTIN
POLR3F
DZANK1
NVL
NME6
PSMG2
CEP76
SUDS3
DYNC1LI2
VTI1B
IPO13
NCLN
VDAC2
HSPA9
RWDD1
NUP85
EFTUD2
CCDC103
EXOSC5
BCKDHA
GATA4
REXO1
RPL21
DCTN1
HOXA2
SLC35B1
TBCK
AIMP1
POLR2E
NUP205
BBS9
SRD5A1
SEC61B
ALG2
STAM2
MRPS7
GGA3
ARHGEF10L
STAM
C19orf48
TSN
ATP5MG
GOSR2
BLCAP
PES1
UPF2
ACTR10
IRGQ
ZNF576
HADHB
HADHA
VARS1
SUPV3L1
HOXB3
MRPS5
SKP1
PSMD12
TSNAX
GOLGA5
RBBP5
PAK1IP1
C6orf52
PNO1
LYRM4
FARS2
FARSB
PCBP1
TTC8
FAM104A
C17orf80
RPS23
ATP6AP1L
NDUFA4
ISCU
SART3
PI4KB
RUNX1T1
SMC2
TMED1
RABGGTB
USP1
COX7A2L
ZRANB2
PROSER1
NHLRC3
CELF4
SF3B3
COG4
ADK
AP3M1
ANAPC7
TBX2
RBKS
BABAM2
ICE1
EIF4ENIF1
TBX3
UFM1
RPS12
SELENOF
HS2ST1
TM9SF1
NR2F1
CAPRIN1
XPNPEP3
ST13
RPS27A
CLHC1
DMD
DPH6
PAF1
PDAP1
BUD31
IQCG
RPL35A
LIN28A
OSGEP
APEX1
ELOVL6
BAG6
CLGN
VPS13A
DDX39B
CXXC4
NDUFA10
COMMD1
CCT4
OAZ3
MRPL9
HEXIM2
PDE12
NEO1
MGST1
DIAPH3
STK36
RNF25
PIN4
ZFHX4
SUCLG1
MRTFB
PRUNE2
ZNF608
ZNF503
ASPG
ACKR3
PTGES2
POU2F1
NIBAN1
KIAA1217
FLVCR1
GBP3
PKDCC
ACVR1
CCDC183
CNPY2
PLAGL1
MRTO4
EMC1
ARHGAP11A-SCG5
ARHGAP11A
HOXA4
P2RX6
C9orf153
SEH1L
ZFHX3
FGF7
HOXB9
ZNF587B
SEC11C
EIF3D
PPFIA2
TLE4
RSRC1
EYA1
CNR1
TAF9
RAD17
AK6
ZGPAT
ARFRP1
PRR13
RPL7
RDH10
CDC42EP3
ZBTB18
GTF3C4
DDX31
RPS29
LRR1
TNP1
HES1
NT5C3A
TMEM9
SCHIP1
RARA
POLDIP3
POLR3A
CPA1
LIX1
DSCAML1
ZP3
HOXC5
SORBS2
CCNDBP1
ABCC9
CYP26A1
COLEC12
SKIL
ZNF383
PPP1R3D
FAM217B
TMSB4Y
RAB30
HOXA3
ATP1A1
MYLK3
CDC73
CDH3
CACYBP
ID2
MEIS2
KDM3A
RPN1
CS
SALL4
GABRB2
PEDS1-UBE2V1
PEDS1
TTI2
GFRA3
NNMT
VTN
PDGFRA
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
CCDC59
HOXA5
TXNRD1
GORAB
USP34
HNRNPD
REC8
MGST2
IRS2
TLE2
HOXB8
STRA6
EIF2S3
MDC1
COL5A2
VANGL2
PDHX
APIP
CEP70
TBX18
SLITRK6
ALKBH5
FGF8
GADD45GIP1
CALM2
KCNIP4
ZNF746
CAPN7
EDNRB
IGF2BP3
UNKL
C12orf29
PDE7A
ALG10B
CCN2
IL1RAPL1
SLC25A6
NDUFB3
FAM126B
HSPA1B
ST7
ID3
HEY2
DUSP9
FOXP1
DNAJB4
ECHDC1
HAND2
CREB5
OTUD4
MRPL39
MRPL38
SEMA3E
MPPED2
BRD3
NEURL2
CTSA
SPRR2F
PCDH15
ESRRG
KANK1
NELL2
TNRC18
SMAD7
TCF4
ZNF644
ETV1
DZIP3
CIP2A
MCF2
AHNAK
SH3BP4
RCOR1
GTF2H5
IKZF4
PKIA
NR2F2
CSNK1A1
IGFL2
FHL1
PLEK2
RAPGEF4
DCN
PCBD2
TNFRSF19
UBE2I
RARB
RPS10-NUDT3
RPS10
CDH18
GRWD1
DUSP6
BNIP2
ZYX
SH2B1
GFRA1
H2BC5
IL19
TRIM24
CSDC2
USP17L15
CFAP69
ATG2A
STARD13
SIRT4
KMT2A
ANK3
MAML3
RAP2C
CDA
SRRM3
CLCN3
DLAT
RBM25
VIM
SPIN1
PDCL3
PCDH18
JADE1
ANKS1B
SLC30A4
CRY1
TAS2R9
DNAH12
TBC1D5
UGT2B11
DLG2
YTHDF2
RARG
MSX2
IFI16
PYDC5
OTUD7B
ZNF341
H3C12
CBFA2T2
SYNJ2BP-COX16
SYNJ2BP
MID1
HOXB5
SVEP1
SLC18A1
TBC1D9
SASH1
HOXB13
TTLL6
NSD2
RAPGEF2
ELF1
WBP4
TFAP4
PCNX4
TMED7-TICAM2
TMED7
ANXA11
AXDND1
ARAP2
VPS33B
NDUFS7
ITGAV
KAT6B
SERTAD2
XPR1
SPCS1
GLT8D1
EIF4A2
ALG5
PAM
NEK7
PAQR8
EIF3A
SKIV2L
NELFE
DRAP1
C11orf68
FGD3
MEF2C
HIBADH
TCHP
RCOR3
SKAP2
SMIM20
RGS5
RNF207
GAS1
XPO1
CLDN2
LIN28B
ACBD6
CPN2
ST3GAL6
SEMA3A
CCDC174
UBA3
JMJD1C
UTRN
CHD8
ATP5MC1
EVA1B
CLASP2
AJUBA
PDCD4
MTF2
PRSS47
PNN
CMTR1
AKIRIN1
ACYP1
ZC2HC1C
SRCAP
LOC730183
CTF1
ARID5B
RNF125
SGK3
RASSF4
CBX3
HNRNPA2B1
ADM
ZBTB20
YAP1
ADAMTSL4
ATF6
HOXB2
MYADM
ZNF391
MAD2L2
DRAXIN
KAT6A
CEP85L
E2F6
ABHD12
SLC28A3
AMOTL2
THUMPD3
MEIS3
ALPK2
PHACTR2
GLRX2
HUS1
DUSP4
REL
IFT74
NCBP3
ISG15
NELFA
ARHGEF1
LDB1
MFAP4
ACTB
POLR2J3
ECSIT
MAP4
COL23A1
QPRT
TNNT2
MYO16
KANSL3
RERE
ZSCAN30
ITGBL1
ALX1
CNOT2
SULF1
MTRF1L
HINT2
ATAD2
SYNJ2
PDE4D
PPIP5K2
GIN1
KCNT2
NCOA7
BAG2
NBN
TBPL1
KIAA2026
SLC26A8
SEC14L5
MARCKS
SHB
TRIP12
FBXO36
CPVL
CHN2
EPHA3
JAK1
ANAPC15
SLC18B1
ARHGDIB
ZNRF1
BEND4
FABP5
SPPL2A
ELAPOR2
CEP41
DEDD
SH3BGR
LCA5L
ZNF783
MDK
NEUROG2
NEUROG3
VEZT
FGD6
PMAIP1
ATOH1
NEUROG1
BICRA
BNIP3
IGFBP2
C16orf91
ANKLE2
ST18
SP5
TPRA1
RBPJ
ANK2
PDHB
INSM1
TMEM70
MALRD1
MYRIP
RBBP7
GPR108
GADD45G
GRSF1
KAZALD1
ARSG
SPATC1L
MRPL34
PRDM12
HOXB4
RASSF2
FLOT1
INAFM2
TMPPE
GLB1
BFSP1
SH3BP2
RNF149
UPF3A
MBD2
METTL11B
RGS12
LPIN1
MTRNR2L2
MTRNR2L8
ARID5A
SRSF11
LRRC40
RAI14
SP2
PARK7
CCPG1
C15orf65
TIGD1
EIF4E2
RPS6KA1
SEC14L1
C11orf24
KCNAB2
ARHGAP24
SLCO4C1
GRHL3
CCDC88A
SPECC1
ID1
BRWD1
NADK
STK38
NCOA2
FGFRL1
VOPP1
KLF17
NBEAL2
NKD1
CPSF4L
LPCAT3
MTMR4
BIN2
FGR
DIAPH1
CDCA7L
NBPF1
ZNF76
CAMTA1
USP15
SNX3
WNT10B
LNPEP
CABIN1
DENND2D
DDX3X
PRDM10
POR
TBC1D8
ZCCHC3
NFKBIA
IQCH
AAGAB
CD38
TRAF4
ING1
VAV1
HEBP2
ATP23
PNKD
DHRS3
PCNA
RASSF5
OTX1
SPACA1
EXOSC4
MINDY2
IQGAP2
HES3
PKN2
FAM110A
PPIB
PDPN
RYBP
SMARCD2
PLCB2
NKIRAS1
PCTP
IFRD2
H6PD
PEX14
NDFIP2
HMGCS1
PRDM1
CFD
SLC35E2B
HESX1
PXYLP1
TBRG4
ARIH2
PLEKHO2
NR1D2
RNF139
JAK3
SH3TC1
CYCS
ZDHHC4
PKM
CCDC114
ZNF740
CSAD
SP7
DYNLL1
GTF3A
SOD2
PIK3AP1
LTBR
DPP9
CLIC4
CBFA2T3
NR2C1
KCTD6
ADCY7
PRSS56
KIF26A
DTNB
DGKZ
ATXN1L
SLC35E2A
PTGES3
RBL2
HES5
SRPRA
FCHSD2
TMEM222
SSX2IP
FAF2
CASC3
CD164
USP3
CTTN
SLC39A13
KIF21B
ANKRD13D
TRMT6
MCM8
RMND5A
CSRNP1
MRPS24
TRERF1
SNAPC3
BAZ1B
LAPTM5
USP42
NOTCH2NLA
ARHGAP4
UNC13D
STX18
SLC10A2
SBNO2
CLTC
PIP4P2
MAP2K1
MAD1L1
KCNH2
IL21R
PPCDC
MTCH1
DGAT2
CENPH
ZNF25
ATG16L2
RASGRP2
PEAK3
THRAP3
COX5A
MRPS31
CDX1
NOTCH2NLC
EIF4H
ZSWIM6
EPM2A
RAD50
PIKFYVE
ZBTB17
SDE2
ARL4A
UROD
HECTD3
PSMD3
LRIG3
FBXO41
SMPD1
ZNF414
RFESD
ADAM17
RXRA
STRADA
KEAP1
ACOT2
RWDD2A
PGM3
MC1R
WTAP
LSM5
MAGEF1
ERLIN2
CBWD5
CBWD3
NIBAN3
SERPINB1
PRKDC
MCM4
PANK2
ZNF318
ASNS
USPL1
HMGB1
PEX3
ADAT2
ATAD3B
UBL7
DYNLT1
DONSON
VPS37C
C1orf159
TUBB
FXYD2
HOXD3
NOTCH2
OR2L13
MAST2
GPATCH8
NGRN
MCU
FAM120B
RNF103-CHMP3
PNRC2
PHF19
MAPKAPK3
CISH
TIGD5
EEF1D
CBWD6
RER1
MORN1
UPP1
ARF3
C18orf32
HOXC6
BUD13
IFNGR1
NIBAN2
DDX23
FAM227B
DTWD1
NCBP2AS2
NCBP2
ATAD3A
USP21
NOTCH2NLB
LRCH4
FBXO24
KIF1C
INCA1
KMT5A
CYB5R4
HPF1
DENND1A
TDP2
CNOT6
BHLHE40
ACOT13
JAKMIP1
NINJ2
RAP1GAP2
NUDT15
ARHGAP45
SYPL1
NANP
YY1AP1
DAP3
C12orf65
UBE2L3
RIMBP3C
RIMBP3B
ARHGEF18
PCMT1
AVL9
CDS2
NMNAT1
LZIC
CEP135
ASB1
SLC7A5
MYCBP2
TSPAN4
POLR2L
ATG5
APBB1IP
CCNL1
PTDSS1
MTERF3
MFN2
ZCCHC24
GSPT1
ITPRIP
KRI1
C21orf91
SNUPN
LTB4R
LANCL2
EIF5
UNK
ADORA2A
HYLS1
HOXC4
SREBF2
TRAP1
PSMF1
HMGCL
MEPCE
MTMR1
ZNF219
RPLP1
RITA1
DDX54
GFER
ASH1L
GTF2H3
EIF2B1
BRAT1
CTSC
DISP3
TLE3
TAS1R1
NOL9
UBIAD1
FDX1
IMPA1
CD63
TMEM199
POLDIP2
MAPK6
DLX2
FNTA
NAA40
SLC16A6
LAMP1
MT2A
KDM1A
NOC4L
DDX51
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
ZNF395
ARHGAP27
MKRN2
ARF4
ZFAND2A
MBD6
PDZD2
NREP
CARMIL1
BRAP
ACAD10
ATOH8
IL6R
POLD2
FKBP1A
EIF1B
PTK2B
LONRF3
PGD
RPS3
ZCWPW1
PGLS
RPL8
ATG101
TKFC
DDB1
SGK1
MDM2
HNRNPF
CHST11
RIMBP3
GARS1
TMEM65
CDC42
FAF1
DNAH7
RAN
DYNC2H1
BOD1L1
GFUS
CNPY3
TRDMT1
GALE
LCOR
DHRS4L2
DHRS4
WBP1L
DNAJB2
SPRY2
NCKAP5L
SMG6
FKBP5
EHD1
UBE2K
PPIL4
MRPL20
PEX2
DENND4B
C6orf89
RCC2