ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX391683 | CD34 Hematopoietic stem cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◣ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

HTR5A
CYB5R4
PLA2G4E
RAB37
ZWINT
C2orf66
GTF3C3
ZNHIT6
MANEA
PDE11A
CNGA1
KCNJ1
DMAP1
BPIFB3
COX6A1
CAPN11
NUF2
C3orf14
OR4K17
PDP1
FRA10AC1
RGS21
INTS12
GSTCD
IQSEC3
TBC1D19
IER3IP1
FRMPD4
WDR33
HTR4
KCNH1
SPX
NUP42
MED23
ENPP3
TOP3B
XKR7
KCNJ15
SKP2
LMBRD2
SRRM3
TTC30B
MRPL44
EIF2D
DBNDD2
ZBTB8B
TMEM262
GCNT7
FAM209A
LBP
APOC3
APOA1
UBE2H
ANK1
RAD54L2
PPIAL4F
PPIAL4E
PPIAL4D
COQ9
CIAPIN1
RBBP9
SMIM12
FOXN1
COX16
PGLYRP4
S100A9
PUM1
CASS4
SLC30A7
EXTL2
NPAS4
PEX7
BTBD8
AADACL4
ADAM21
P2RY4
ARR3
MAP3K13
KIAA1549
CPLX2
MRPS31
MRPL21
IGHMBP2
BSDC1
RBBP5
USP30
ICMT
HES3
RPS7
SHISAL2B
PLEKHM3
DCAF10
FGF1
TMEM242
BACH2
MINDY3
BARX1
TRIP4
PCLAF
MTF2
PEX3
ADAT2
ALG10B
AKR7A3
CCL24
GDPGP1
CIB1
STAC
CDCA7
ELOVL2
SELENOH
BTBD18
PIP
ADCY10
INKA2
DDX20
SPATA22
ASPA
SAR1B
LDHD
SEC13
ZBTB26
RABGAP1
YJU2
PANX1
SULT1C3
NUDT15
METTL8
DCAF17
MNAT1
BNIP1
SMIM17
SNCG
MMRN2
COMMD2
DIP2B
AURKAIP1
NCKAP1L
DRG2
GLRA1
OR2L5
R3HCC1
FAM234B
RPL37
CARD6
TM9SF1
IPO4
FAM98B
MYH2
YWHAQ
TSEN15
GLT6D1
CDK5RAP1
PER3
DTX2
DEGS2
GPRC5C
LILRA4
DMXL2
DUS1L
TPD52L1
TGFBR2
GTF2H2C_2
GTF2H2
OR14I1
DLC1
TACO1
TCF7L2
CEP72
CADM3
GAS2L3
DPY19L4
DCP1A
TTC4
CPT2
CLCA1
SEMA4F
M1AP
GTF2H2C
XKR4
BFSP2
NT5C3A
B4GALNT4
PIP4P2
THUMPD1
PROKR2
PLEKHN1
PERM1
F10
CRP
LHFPL4
NEMF
N4BP2L2
TEDC1
CRIP1
CRIP2
CHGB
TMEM222
VSTM1
ZNF391
FGL2
CRH
CTAG1B
CTAG1A
CUL5
SNX11
CBX1
RPGRIP1L
FTO
PRSS22
NRARP
PNMA3
POLR3B
PADI4
ACTR3C
LRRC61
DUSP9
ZNF443
SLC37A2
TEAD2
DKKL1
LSG1
PXDN
ZNF143
NSA2
GFM2
BRPF3
RABEP1
TTC32
KIF22
ZG16
ZNF550
STX18
SLC28A2
TYW3
CRYZ
METTL15
KIF18A
SNAP25
OBSCN
CHIT1
ACER2
ATR
FAM24A
SLC24A1
INTS14
VTA1
NMBR
RPL39L
SAMD4A
CLEC18C
SMYD3
RGS18
PALM3
MAP3K4
CCDC130
FAM227B
DTWD1
VBP1
YAP1
EIF4A3
GSTM5
DNAJC6
ZNF83
CAMK1D
ACSL6
TEFM
EIF4EBP1
NXPE4
SSBP1
OR10X1
NEGR1
SMAD1
RPL27
IFI35
ALKBH3
RRN3
PRELID3B
ATP5F1E
PDE6D
COPS7B
OPA1
FAM160B1
STEAP1B
SMU1
ZNF770
IQGAP1
CASC3
SDR42E1
SERPINB1
PADI1
PLK2
SLC44A1
B4GALNT3
PVRIG
OR5A2
PXK
ZNF207
C17orf75
SPAAR
HRCT1
SFT2D3
CYRIA
SCGN
MRPL39
GBA
GDPD5
FAM193B
FEM1C
BAAT
HMGB1
USPL1
TSFM
EEF1AKMT3
SCCPDH
SNAP47
JMJD4
TMEM229B
VPS13D
CPNE4
SLTM
FBXO38
PRPF18
SIGLEC10
OPRM1
NAXD
ZNF26
ADRM1
RPL10L
PPP6C
ZNF117
NMNAT1
LZIC
PAFAH2
CCDC88A
CLK4
KLF14
KANSL3
FER1L5
ALG10
SLC8A1
NDUFS7
RHOT2
RHBDL1
PRR23D2
PRR23D1
TSPAN5
ZBTB44
KSR1
ZMPSTE24
TMCO2
PDE1C
LMLN
IQCG
TPM1
TDP2
ACOT13
MRPL3
RPS20
THSD7A
POLE4
FSIP2
ACOX3
TRMT44
AKAIN1
PPP1R3C
MID2
EPS8
AKAP12
RTTN
STX16
INSM2
ITGB3BP
EFCAB7
SMCO1
TMCC3
SLC25A51
TMEM41A
FEM1B
SLITRK1
MAP3K2
PSMF1
NR1H3
ACP2
DSTYK
TPST2
SAP130
B4GALT7
TMED9
KLHL30
GNAL
LARS2
B3GALT2
BMS1
CALB1
FDX1
PSMD8
ANGEL1
SCG3
JMJD1C
REEP3
RPS14
CTNNB1
CERS3
GPR35
CCDC97
HGS
ARL16
FRG1
CCDC137
POM121
ST6GALNAC6
R3HDM2
GRIA2
TRMT5
SLC38A6
CAMK2G
PTGER2
EEA1
TCP11L1
TNPO2
NTSR2
LPIN1
TGM1
DNAJC24
DCDC1
RABGGTA
C10orf143
GPR78
NME1-NME2
NME1
CYRIB
CSGALNACT1
SPATA33
VWA8
MKLN1
UQCRC1
TMEM89
OR56A5
STN1
HOPX
C5orf60
RPS29
GAS7
PDHB
RMDN2
EIF3E
BSPRY
RFC1
GLIPR1L1
CAPS2
MMP7
PIN4
NOXA1
TTLL1
ERCC6L2
CLVS1
METTL9
NXPH3
NUP54
DRAP1
C11orf68
SF3A3
PPIP5K2
GIN1
GJD3
MEX3C
C2orf88
VMO1
PSMB6
GLTPD2
MAN2C1
WDR27
C6orf120
TXNL4B
DHX38
CLIC3
LBH
RPLP1
SKOR2
COQ2
DNAJC25-GNG10
DNAJC25
FKBP11
AP3S2
MED4
ATP5F1B
SPATA6
HNRNPA1L2
HERPUD2
KLRD1
CLEC18A
SELENBP1
SAMD4B
GMFG
RAP2C
IRAK2
ATP6V0C
MOB3A
IZUMO4
ATP10D
INO80C
FAM86B1
NEFH
NCEH1
ITGA4
MTMR6
FAM184A
MRPL40
HIRA
PPIAL4H
SUGT1
EXOC6
UTS2B
CCDC50
ZNF24
GTF2A1L
CPA6
GINS1
DERA
GGACT
BAIAP2
OR1E3
AFAP1
SREK1IP1
CWC27
ZFPM2
ADAMTS7
SYTL4
HUS1
AADACL2
PSRC1
CD2
WDFY1
AAR2
DAB2IP
CLPP
APOBEC3B
NPIPB9
PXDNL
DUSP6
PRUNE2
LEP
APOL4
TMX2
MED19
MARCHF4
TTC26
TMED1
DLGAP4
C11orf49
EXOC2
NECAP2
MNDA
ST20-MTHFS
STOML2
FAM214B
PIGO
TNFAIP8L2
SCNM1
LYSMD1
TMOD4
ACTB
PRIM1
HSD17B6
PPM1H
CHST3
NOTCH2NLC
TBC1D22A
UBE2F
GTDC1
RTP3
LTF
DDX18
ZNF579
DISC1
FAM53A
ZNF296
GEMIN7
ACAA2
ASF1A
MAP3K19
PRAMEF1
YBEY
MCM3AP
OAZ3
MRPL9
TMEM68
TGS1
DGKZ
TMEM62
NOTCH2NLA
STAT1
FAM207A
F2RL3
MOB4
SMIM13
FGFBP3
ZNF761
SLC35G5
HRH4
WDR36
PPP1R14C
POLD1
CTHRC1
RNF6
NCOA7
GOLIM4
LAMTOR1
PDCD6IP
NDUFC2-KCTD14
NDUFC2
EIF5A2
EDN1
COMT
TXNRD2
ADNP
TSPAN10
NPLOC4
NDUFA4
MFSD1
PARK7
RPS5
CPEB4
CYB561D1
ATXN7L2
ITGA7
BLOC1S1
NMNAT2
ANKRD46
RUVBL1
SYN3
TRDMT1
MRLN
CHMP7
SNRPB
HOXC6
HOXC5
CYP2C9
TFPT
PRPF31
ALDH3A1
TM9SF2
POLR1F
TLR2
POU2F1
NEUROD1
DDX1
FUT10
MRPS14
PLEC
FGD3
METTL27
CLDN4
AQP2
ANKRD40
SURF2
SURF1
RPL7A
MED22
CDKN2AIPNL
BZW2
CLEC18B
ANKMY2
VAMP1
FAM133B
SESN1
CEP57L1
DHX32
SNX19
AGK
SECISBP2L
CTRL
CA2
PSMB10
IL22RA2
ZNF627
ZNF829
ZNF568
DNAJC3
DIS3L2
NSMAF
TGM6
MITD1
GLIPR1L2
PHF21A
FAM221A
TVP23B
TDG
C12orf73
GBP4
GPT2
IL4R
TNFAIP8L1
CRELD1
POLR3E
PLCL2
ZNF212
RARG
TACC1
EIF2B3
ZFP30
MAPK1IP1L
TRAM1
TATDN2
LOC100289561
LUC7L2
FMC1-LUC7L2
FMC1
HMOX2
NMRAL1
HPSE2
FKBP9
TOR1AIP2
TOR1AIP1
NBEA
MAB21L1
WDR11
SC5D
TYSND1
PDE4C
MRPS16
COLEC11
KDM3B
NOTCH2NLB
PDE7B
OTUD7A
RHOT1
SCAMP2
ACSF3
BZW1
THEM4
SLC35A3
RPL5
ZNF783
DPH2
ATP6V0B
SNX20
C4B_2
C4B
LOC110384692
C4A
MYO5C
DGKQ
STK19
DXO
TMEM202
L1CAM
HACD2
KLHL20
GARS1
SLC41A3
OR10J1
PIK3CB
ZBTB40
NNT
PPIAL4A
ZNF34
SLC16A2
TBCK
AIMP1
SAAL1
DHRS7
RFX7
TEX9
A2M
STAT3
KNL1
SMTNL2
CXCL2
LGR5
ANKRD18B
GPD1L
SLC38A9
ABR
ARL8B
NCBP3
VIRMA
RICTOR
MRPL58
AARS2
CENPV
NPIPB6
BIN2
CD58
GASK1A
PPP2R5B
ATG2A
TMEM255A
OR6J1
LCP2
PRMT3
ARHGAP42
SNRK
SEMA3D
MRPL16
KCTD6
ZNF426
PET117
KAT14
RAP1GAP
BTG3
PCSK1
TTLL12
POLR2J3
DDC
DLGAP3
POMP
SLC1A7
EPHA3
ATP5MC2
SNAPC3
PPM1M
MRPL22
GEMIN5
TAMM41
TOMM20L
ACOT2
LIPA
CNOT6
NBN
TAB1
EPM2A
TPM3
NXPE3
FOXN3
BTN3A2
GJB2
CDC73
ZSCAN12
ANKAR
ZNF501
ZER1
PSEN1
AGL
MRPS18C
HELQ
ASNS
PLCD3
ACBD4
CRBN
NUDT4B
GOT2
TINF2
GMPR2
NEDD8-MDP1
NEDD8
ACY3
POLM
CYC1
GPAA1
EXOSC4
CCDC59
CBWD1
ZNF527
ZNF324B
ZNF132
CEP85
S100A2
PRDX3
PTRHD1
CENPO
FAM25E
PHTF2
TMEM60
PHGDH
ZNF609
TRAF6
RAG1
MSMO1
EIF1AD
CST6
BANF1
RHEBL1
KMT2D
TARBP2
NPFF
MAP3K12
SMAD5
EEFSEC
NKX1-1
C2orf69
CYP17A1
CREBL2
THOC5
STXBP3
PRSS38
SCAF11
ZNF114
PHYHIP
POLR3D
TNXB
GPR3
CD164L2
C10orf88
PNPLA7
MRPL41
TANGO2
ARVCF
CD86
MTPN
LUZP6
SVOP
CCDC92B
GTPBP4
MTIF2
RPS6KB2
PTPRCAP
CORO1B
METTL7A
RPL11
FHL3
NPIPA3
NPIPA2
PLA2G10
EMC8
COX4I1
SNRPB2
COL9A2
PPP2R3A
EML5
CCNF
PTPN21
MAOA
UTP3
C8orf37
ZNF708
LIN28A
CBWD5
CBWD3
WDR24
JMJD8
STUB1
SERHL2
OR5AN1
ISM1
MTA1
CACNA1G
INTS5
GANAB
WDR41
COL18A1
FOXJ3
CD47
TDRD7
AGO1
PDAP1
BUD31
ZFP41
ZNF433
COMMD4
PFN3
F12
TMTC2
LGALS2
CXCL3
TOX2
RHBG
NPR1
ILF2
SORBS1
CDH5
PSMA3
UGT1A10
BRF2
TIGD2
TMEM70
ELOC
PRMT5
VANGL2
CNOT3
SDHAF3
EPS15
LSM5
AVL9
NFAT5
ARAP1
EPB41L2
C10orf99
COA6
SPEF2
RPS15
MS4A12
ANKRD34C
CFAP298-TCP10L
CFAP298
RNASE10
CHCHD6
TSKU
MTERF1
NME4
DECR2
PGAP6
ARHGAP32
C1GALT1C1L
TMEM106C
ZNF280D
VPS72
PIP5K1A
SPDYA