ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3584306 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◣ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

ZNF335
RABL2A
PSMD1
NME6
RABL2B
MAPKAPK5
SUDS3
RWDD1
CACTIN
POLR3F
DZANK1
DYNC1LI2
VDAC2
NUP85
IPO13
NUP205
HSPA9
VTI1B
PSMG2
CEP76
GOSR2
RPL21
NVL
POLR2E
SEC61B
ALG2
ATP5MG
C19orf48
NEUROG2
EFTUD2
CCDC103
TBCK
AIMP1
FARSB
ACTR10
EXOSC5
BCKDHA
MRPS7
GGA3
STAM2
HADHB
HADHA
IRGQ
ZNF576
PNO1
REXO1
PAK1IP1
C6orf52
SKP1
DCTN1
BLCAP
STAM
SRD5A1
PES1
CAPRIN1
TSNAX
LYRM4
FARS2
NCLN
TSN
ISCU
SART3
SUPV3L1
UPF2
ANAPC7
RPS23
ATP6AP1L
COX7A2L
IGFBP2
ZRANB2
SF3B3
COG4
VEZT
FGD6
PCBP1
NEUROG3
XPNPEP3
ST13
IQCG
RPL35A
VARS1
TTC8
GOLGA5
RPS27A
CLHC1
NDUFA4
SLC35B1
RABGGTB
DPH6
PDAP1
BUD31
PI4KB
ADK
AP3M1
RPS12
SMC2
EIF4ENIF1
RBBP5
PSMD12
UFM1
TMED1
HES1
SELENOF
HS2ST1
MRPS5
MALRD1
ICE1
FAM104A
C17orf80
USP1
RBKS
BABAM2
UBE2I
OSGEP
APEX1
INSM1
BNIP3
DDX39B
ATOH1
PAF1
TM9SF1
PROSER1
NHLRC3
PRDM12
C16orf91
PTGES2
PIN4
HOXA4
BAG6
RPS29
LRR1
TAF9
RAD17
AK6
NDUFA10
BICRA
ANK2
BFSP1
TLE4
RBBP7
ARHGAP11A-SCG5
ARHGAP11A
MRTO4
EMC1
SUCLG1
RAI14
KIF26A
COMMD1
CCT4
SLC7A5
PMAIP1
EIF2S3
TPRA1
PDHB
HOXB4
GTF3C4
DDX31
RGS12
GADD45GIP1
STK36
RNF25
CNPY2
SPACA1
RPL7
RDH10
SEC11C
DDX3X
PCBD2
CAMTA1
ANKLE2
DSCAML1
CLDN2
GFRA3
HES3
RPN1
ZNF383
SLC10A2
HOXD3
SKIL
ID1
PDZRN3
NEUROG1
CEP41
PRUNE2
KIF21B
PDHX
APIP
OAZ3
MRPL9
PAX3
HES5
GTF3A
LPIN1
CDC73
VOPP1
PDPN
CPSF4L
ZFHX4
CLEC18C
ALKBH5
KLF17
PLEKHA5
GFER
LRIG3
TNC
NEDD9
GORAB
CLGN
DHX32
METTL11B
TBC1D8
PNKD
OR8J1
GADD45G
GFRA1
LIN28B
UPF3A
ARHGEF28
OTX1
BRWD1
CBX3
AXDND1
TIGD1
EIF4E2
ZGPAT
ARFRP1
HSPA1B
RPS10-NUDT3
RPS10
JAKMIP1
TMPPE
GLB1
HOXC5
LIX1
MEIS3
PPP2R5A
ST18
PDE12
HOXA3
ZBTB25
ZBTB1
ZNF746
KAZALD1
POLR3A
MEF2C
MYRIP
EIF4E3
ZNF608
DHRS3
TRIM71
ATOH8
TAGLN3
TLE2
ZNF341
NNMT
NR2F1
PHOX2B
RARA
TCF4
CEMP1
RAN
MUSTN1
CS
FRRS1L
KMT2A
HNRNPA2B1
ZFHX3
CER1
FABP5
FHL1
RYBP
TRAP1
WBP1L
SLC39A6
CPLX1
MTMR7
NELFA
HNRNPD
MRPL38
MEPCE
ZCWPW1
RCOR3
LIN28A
AJUBA
SPCS1
GLT8D1
SYTL2
LDLRAD3
KEAP1
REC8
FAM124A
PAX7
ARHGAP24
BMPR1B
STOML2
HOXA2
COX5A
POU2F1
TFDP2
DNMT3B
ITPRIP
CHD8
CLEC18B
EIF4H
KDM1A
CATSPERB
HOXC6
FGFR4
TPO
CNN3
TMEM70
SRSF11
LRRC40
FOXO3
TRDMT1
PLEKHA6
ADM
CPVL
CHN2
RCOR1
TBL1XR1
SP8
DGKZ
RBPJ
DICER1
CCDC169-SOHLH2
CCDC169
MECOM
QPRT
IPO11
ACOT6
PEX2
CIAO2A
CCDC198
TRIM2
CCDC107
TRAF3IP2
HEY1
SH2B1
UROD
HECTD3
GIGYF1
ABAT
HSD17B8
ALPK3
BBS9
LRRC8C
ATP5MC2
SOX11
PKDCC
ZNF853
SERPING1
KMT2B
ARHGEF1
PANK2
DUSP6
NKIRAS1
NR1D2
PIPOX
BCO1
DRAP1
C11orf68
CCDC43
USP17L22
USP17L20
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
HOXB3
SPOCK2
MSI2
TCHP
RARB
CDX1
RFFL
VXN
ADAMTS10
CALHM6
P2RX6
FGFRL1
ELMO1
PTCH2
DTNB
SPTBN1
MTF2
SOX6
PAX6
SYBU
NEDD4L
ZNF593
C1orf232
ZNF891
ZNF10
WRAP53
COL5A2
PRM3
IDUA
KAT6B
ACCS
TPST1
AGPAT4
ROBO3
CENPBD1
IKZF4
GCK
ELOVL6
FAM181A
NCALD
NCOA2
KRT9
NEO1
H3-3A
RPS24
EFNB1
CCN2
PPP1R3D
FAM217B
IRS2
LMX1A
DUSP2
CETN1
G0S2
CSTF2T
FERD3L
LPAR3
ACVR1
MAD2L2
ASIP
DRAXIN
CSNK1A1
NPAS4
H3C12
MGST1
KAZN
DLC1
CASC3
SOX12
FGD4
RPS7
PTPRZ1
POLR1D
LNX2
TXNIP
KDM3A
RBMS3
BRI3
ZFAND4
CMTR1
CEP63
ANAPC13
RXYLT1
PRTG
ELAPOR2
DENND1A
NCAM1
KLB
RIN2
NDUFS7
SPIN1
PCDH18
C12orf42
DYRK1B
CDIP1
SELENOP
LZTFL1
SP5
KCNJ13
RBM25
VANGL2
HES4
PAH
ASCL1
NUP93
HABP4
TTI2
USP17L15
DLX4
ETV1
ZNF587
DGAT2
SASH1
WDR74
HOXB5
KDM4C
CELSR3
SPHK2
RPL18
MPZL2
RIMBP2
DLG2
PHACTR2
AKIRIN1
DONSON
MFSD3
YAP1
TBPL1
GAS7
SGK3
GRWD1
WDR47
PEX14
GPRC6A
NFIX
POLR2J3
RAPGEF4
FOXP1
CXCL6
RSRC1
RNF138
FAM162A
CCDC58
PLXNB1
CBX5
SECISBP2L
HMX3
GATD3B
GATD3A
GUK1
CCNO
AKR1C2
ZNF423
NAALAD2
LIMCH1
ZSWIM2
KAT6A
LMNA
MEX3A
LTV1
TAS2R7
NDUFB3
FAM126B
NAT10
GAS2L3
CCNDBP1
SLC25A6
SEMA4B
PODXL
ZGRF1
LARP7
PRSS47
UBR5
C15orf61
TMEM114
MYH3
STRA6
SOX5
KRTAP3-1
CLASP2
ANKRD6
NEBL
WFIKKN1
ID2
GATA4
GPR108
GRSF1
ARSG
SPATC1L
MRPL34
RASSF2
FLOT1
INAFM2
SH3BP2
RNF149
MBD2
HUS1
MTRNR2L2
MTRNR2L8
ARID5A
HEXIM2
SP2
PARK7
CCPG1
C15orf65
RPS6KA1
SEC14L1
C11orf24
KCNAB2
SLCO4C1
GRHL3
CCDC88A
SPECC1
ARHGEF10L
NADK
STK38
NBEAL2
SKIV2L
NELFE
NKD1
LPCAT3
MTMR4
BIN2
FGR
DIAPH1
CDCA7L
NBPF1
ZNF76
USP15
SNX3
WNT10B
LNPEP
CABIN1
CDC42EP3
DENND2D
CCDC174
DIAPH3
PRDM10
RUNX1T1
POR
ZCCHC3
NFKBIA
IQCH
AAGAB
CD38
TRAF4
ING1
VAV1
HEBP2
ATP23
CNOT2
PCNA
RASSF5
EXOSC4
MINDY2
OTUD7B
IQGAP2
PKN2
FAM110A
PPIB
SHB
SMARCD2
PLCB2
PCTP
IFRD2
H6PD
YTHDF2
NDFIP2
HMGCS1
PRDM1
CFD
SLC35E2B
HESX1
PXYLP1
TBRG4
HIBADH
ARIH2
PLEKHO2
RNF139
JAK3
SH3TC1
CYCS
PDE4D
ZDHHC4
PKM
CCDC114
ZNF740
CSAD
SP7
BNIP2
DYNLL1
SOD2
PIK3AP1
KANSL3
LTBR
DPP9
CLIC4
CBFA2T3
NR2C1
KCTD6
ADCY7
PRSS56
ATXN1L
SLC35E2A
PTGES3
RBL2
SRPRA
FCHSD2
TMEM222
SSX2IP
FAF2
C12orf29
RARG
CALM2
CD164
USP3
CTTN
SLC39A13
ANKRD13D
TRMT6
MCM8
TBX2
RMND5A
CSRNP1
MRPS24
TRERF1
SNAPC3
BAZ1B
LAPTM5
TXNRD1
USP42
NOTCH2NLA
ARHGAP4
UNC13D
STX18
SBNO2
CLTC
PIP4P2
MAP2K1
MAD1L1
KCNH2
IL21R
PPCDC
MTCH1
CENPH
ZNF25
RNF125
ATG16L2
RASGRP2
PEAK3
THRAP3
MRPS31
ZNF503
NOTCH2NLC
ZSWIM6
EPM2A
RAD50
PIKFYVE
ZBTB17
SDE2
ARL4A
PSMD3
FBXO41
SMPD1
ZNF414
RFESD
ADAM17
RXRA
STRADA
ACOT2
RWDD2A
PGM3
MC1R
MTRF1L
WTAP
LSM5
MAGEF1
ERLIN2
CBWD5
CBWD3
NIBAN3
SERPINB1
PRKDC
MCM4
ZNF318
ASNS
USPL1
HMGB1
PEX3
ADAT2
ATAD3B
UBL7
DYNLT1
VPS37C
C1orf159
TUBB
FXYD2
NOTCH2
OR2L13
MAST2
GPATCH8
NGRN
MCU
FAM120B
RNF103-CHMP3
PNRC2
PHF19
MAPKAPK3
CISH
TIGD5
EEF1D
CBWD6
RER1
MORN1
UPP1
ARF3
C18orf32
BUD13
IFNGR1
NIBAN2
DDX23
FAM227B
DTWD1
GABRB2
NCBP2AS2
NCBP2
ATAD3A
USP21
NOTCH2NLB
LRCH4
FBXO24
KIF1C
INCA1
KMT5A
CCDC59
CYB5R4
HPF1
TDP2
CNOT6
BHLHE40
ACOT13
NINJ2
RAP1GAP2
NUDT15
ARHGAP45
SYPL1
NANP
YY1AP1
DAP3
C12orf65
UBE2L3
RIMBP3C
RIMBP3B
ARHGEF18
PCMT1
AVL9
CDS2
NMNAT1
LZIC
CEP135
ASB1
MYCBP2
TSPAN4
POLR2L
ATG5
APBB1IP
CACYBP
CCNL1
SERTAD2
SEH1L
PTDSS1
MTERF3
MFN2
ZCCHC24
GSPT1
KRI1
EIF3D
C21orf91
SNUPN
LTB4R
LANCL2
EIF5
UNK
ADORA2A
HYLS1
HOXC4
SREBF2
PSMF1
HMGCL
MTMR1
ZNF219
TBX3
RPLP1
RITA1
DDX54
ASH1L
GTF2H3
EIF2B1
BRAT1
CTSC
DISP3
TLE3
TAS1R1
NOL9
UBIAD1
FDX1
IMPA1
CD63
USP34
TMEM199
POLDIP2
MAPK6
THUMPD3
DLX2
FNTA
NAA40
SLC16A6
LAMP1
MT2A
NOC4L
DDX51
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
ZNF395
DUSP4
ARHGAP27
MKRN2
ARF4
ZFAND2A
MBD6
PDZD2
NREP
CARMIL1
BRAP
ACAD10
IL6R
POLD2
FKBP1A
EIF1B
PTK2B
LONRF3
PGD
RPS3
PGLS
RPL8
ATG101
TKFC
DDB1
SGK1
MDM2
HNRNPF
CHST11
TNFRSF19
RIMBP3
GARS1
TMEM65
CDC42
FAF1
DNAH7
DYNC2H1
BOD1L1
GFUS
CNPY3
GALE
LCOR
DHRS4L2
DHRS4
DNAJB2
SPRY2
SMIM20
NCKAP5L
SMG6
RERE
FKBP5
EHD1
SPPL2A
UBE2K
PPIL4
CXXC4
MRPL20
DENND4B
C6orf89
ABHD12
RCC2
ZBTB45
POLG
SNAPC5
NEURL2
CTSA
PPP4R3B
TPP2
TBL3
ZC3H6
GPCPD1
RAC2
PRKAB1
IPP
NUS1
CLCN3
FOS
NCBP3
RBSN
B3GALNT2
MACROH2A1
TMEM41A
SLC35A1
PTP4A2
CD93
TAF12
RAB11FIP1
INTS5
PSTPIP1
CLN5
MRPS28
RNF19A
RGS14
MTCH2
LRRC59
THYN1
RNF216
ETFA
ACAD8
DCP1A
TRAM1
PRR19
PAFAH1B3