ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2059876 | BJAB
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◣ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

SMYD3
SLC1A7
NSMAF
ST20-MTHFS
ZNFX1
ZSCAN30
KCNJ15
F2RL3
THEM4
CHD1L
SLC2A7
YWHAQ
ZWINT
TATDN3
NSL1
BRF2
BAX
THUMPD1
ZNF550
ACY3
TSKU
OBSCN
MOGAT3
GORASP2
HNRNPLL
ADAM21
ZNF708
COQ8A
SNX20
APOBEC3B
HYDIN
SGCE
PEG10
CENPV
IER3IP1
ACTL8
BEST2
WDR33
LMLN
IQCG
MIXL1
UBE2F
SAMD4B
GMFG
EIF4A3
AUH
ZNF433
MTRNR2L8
RBBP9
FIS1
MID2
CHIT1
DTX2
UBE2D3
CISD2
RGS18
MSH3
DHFR
MTRNR2L2
FEM1C
TEAD2
DKKL1
ZNF117
EFCAB12
NSFL1C
FKBP9
YPEL3
TBX6
GPRC5C
CEP72
MEMO1
C5orf49
ORAI2
DEK
SPDYE1
ZNF24
PDP1
BFSP2
TTC32
IFI6
PARP14
ST3GAL5
ZBTB26
RABGAP1
GTPBP4
MAP3K2
ATP5F1B
DBNDD2
FN3K
BRSK2
PTRHD1
CENPO
IGFALS
CMTM3
NLRC4
GPR35
RPS29
NFASC
TBC1D22A
LSG1
FAM161A
CDT1
APRT
ZFP30
FRG2C
KMT2A
SUPT7L
SLC4A1AP
ZNF324B
ZNF132
DUX4
MGAT5B
TRRAP
TMEM130
HACD2
PSMF1
ZNF341
ITGB3BP
EFCAB7
SEM1
SEC23B
FPR2
H2AZ2
SLC25A51
METTL8
DCAF17
MCF2L2
B3GNTL1
ADARB1
FGF1
SMARCA4
CCDC88A
LDHD
POLR2J3
MLLT1
NARS1
ALKBH5
CCDC130
ACTRT3
CYP4F22
MYNN
PGBD2
CCL24
REM1
DEFB124
RCOR3
PLAAT1
MAD1L1
NUDT1
MRM2
PUM1
DPY30
TIMM22
LUC7L2
FMC1-LUC7L2
FMC1
SLC30A7
EXTL2
ZNF3
COPS6
CYP2E1
TMEM61
RPS7
LCP2
MBOAT4
DCTN6
SPACA3
PARP15
PARP9
DTX3L
PRSS38
CPT2
DEGS2
FAM160B1
PNMA3
LBP
GGH
FBXO38
BPIFB3
BCAR3
SLC28A2
NME4
DECR2
PGAP6
SLC18A2
WDR36
CRIP3
C2orf69
GSPT1
KDM3A
TMEM43
CHCHD4
CYB5R4
TATDN2
RPL27
IFI35
BRWD1
PLEKHF2
HEXD
TOR1AIP2
TOR1AIP1
HPS6
ARMH3
MTF2
C1orf100
GBA
MAN2A1
CHD6
TAS2R39
BFSP1
SRXN1
RHOT1
EIF4A2
NUF2
COX6A1
PCP4L1
MTMR12
GUK1
C2orf88
ZNF562
USP3
DEFB128
RFXANK
BORCS8
PAXBP1
ATAD2
LOC101928841
PRKAR1B
FGD3
PRCP
DDIAS
DEFB116
RPS14
LCN8
LCN6
HUS1
LCN10
SLC24A1
INTS14
TLR2
FAM133B
MDM4
PIP
MRPS16
UPK3BL2
SPDYE2B
SPDYE2
RTTN
CDCA7
FRG2
LZTR1
WDR43
ABCB4
NEMF
LMTK2
CYP51A1
MRPL40
HIRA
MYH2
INTS12
GSTCD
HNRNPA1L2
CCDC149
VPS13B
MAML1
RERE
MTRNR2L1
SLC30A6
YME1L1
ARHGEF18
IAH1
MTBP
MRPL13
PET117
KAT14
FAM193B
KRBA1
PMFBP1
POLR2J2
PRDX6
SPAST
RNF141
ZNF441
MED4
R3HDM4
KISS1R
RASSF2
SAMD4A
NDUFS6
MRPL36
RPL39L
NPAS4
EXOC6
MAMDC2
SPDYE17
GJC3
PPIP5K2
GIN1
MRPL19
SNX11
CBX1
GTF2H2C_2
GTF2H2
FAM184A
NDUFA4
BIN2
AURKAIP1
SNRPB2
EIF1AD
CST6
BANF1
EDF1
SSBP1
FRA10AC1
USP32
MKNK1
SMIM13
CAMTA1
HDHD5
MTIF2
NBN
SNAP47
CCDC59
JMJD4
TMEM65
FOLR1
GTDC1
F11R
ERVW-1
LSR
EPRS1
GLT6D1
TEX46
KDM1A
TRMT2A
RANBP1
PDIA4
SLC33A1
ATR
PER3
WWP2
EIF4EBP1
IL22RA2
MLEC
NUDCD3
NDUFV1
VARS2
GTF2H4
FAM98A
RCBTB2
SELENOH
SPHK2
RPL18
FAM83E
RB1
MRPL44
DCP1A
TMEM239
C20orf141
UFD1
CDC45
TRIP6
SRRT
COMMD2
SNAP29
PI4KA
PRKAB2
PLEKHM2
PTCD1
CPSF4
HM13
NCBP3
CTAG1B
CTAG1A
FAM228B
TP53I3
SF3B6
CRKL
ZNF275
PNMA6F
KAT6B
COA6
ADAM22
SNRPB
TTC7B
DND1
WDR55
UQCRC1
TMEM89
STX18
ORC5
RPS15
SUGT1
CCDC150
RPS6KB2
PTPRCAP
CORO1B
CRP
UPK3BL1
ABLIM2
RINT1
PUS7
HMGB1
USPL1
HK1
TGDS
GPR180
PPP1CC
POU2F2
ZNF83
BANP
SPDYE3
TSPAN10
NPLOC4
TBC1D19
NOTCH1
NUP54
ZNF141
DRAP1
C11orf68
LRRC37A3
IL21R
FBXO46
DOK4
NBPF1
DCT
TOX4
RAB2B
LRP6
HIBADH
TIPARP
DPY19L4
WDFY1
HSPE1-MOB4
HSPE1
HSPD1
GCNT7
FAM209A
PSMG1
PDIA6
ZNHIT6
OPA1
CFAP36
SUGCT
MPLKIP
DGKD
UBB
R3HCC1L
BCL2L1
ZCCHC4
YIPF4
ZNF438
HEATR3
HP
ZNF143
NDUFS7
COQ9
CIAPIN1
REN
SPDYE12P
CLTC
SDHAF3
SPRYD7
NME1-NME2
NME1
KANSL3
FER1L5
ZMPSTE24
TMCO2
CLUL1
PALM3
AP1G1
CSRP1
SLC9A3R1
CCDC97
GFI1B
TSC1
GAPVD1
KAT2A
HSPB9
DHX58
IBA57
FCN2
SPDYE13
SPDYE9
SPDYE8
SPDYE15
SPDYE11
FAM71E1
ANKEF1
NAPEPLD
NDUFAF6
TSC22D4
NYAP1
NEIL1
ATXN2
CA14
CA2
SEC14L1
TMEM229B
FAM98B
CRNKL1
CFAP61
GNG2
ZNF527
HIP1
NDUFB3
FAM126B
MCM7
AP4M1
TRIP4
PCLAF
ID1
ZNF408
ARHGAP1
TMPRSS12
SLC41A3
TBC1D13
USP6NL
CCSER2
RTN4R
CLEC4M
CD209
TMEM161A
ZMAT2
HARS2
HARS1
PPP5D1
CALM3
TOR4A
FGL2
MOB3A
IZUMO4
DYNC1LI2
ZNF292
PEX5L
DCAF10
MEF2D
CCL3
CCL3L3
CCL3L1
PDE6D
COPS7B
TGM1
RABGGTA
ZZEF1
CYB5D2
SLC29A2
PRPSAP1
SLC27A3
MICU2
EMILIN1
OST4
KHK
RPL37
CARD6
GCFC2
RAC3
DCXR
PIH1D2
NKAPD1
TMEM191C
OR4K17
NUDT15
PCYT1A
ZNF25
TRIP12
FBXO36
ZBTB8B
NOTCH2NLC
IMMP2L
TSG101
SCCPDH
SCGB1C1
ODF3
ARL11
MCUR1
PEX3
ADAT2
DDX1
RNF6
SEPTIN9
ADGRL1
LDB3
NOTCH2NLA
NT5C3A
TM9SF1
IPO4
TBCD
HKDC1
TRMT61B
FZD1
CCDC68
ZNF891
ZNF10
CCDC116
FAM227B
DTWD1
RRP15
RAB7B
MYLK
POLR3B
SEC22B
GSTP1
SYNJ2
GALK2
RUVBL1
COPS2
EEFSEC
SYPL1
VPS13D
BCAP29
TTLL1
TTLL12
SLC7A11
EDC4
CCDC71L
QSOX2
ZCWPW2
AZI2
CBLL1
CYP2C9
RABGAP1L
MRPL48
RBBP5
REXO4
ADAMTS13
MRPS18C
HELQ
RPS5
DCTN4
BTN3A1
GTF2H2C
TPCN1
NCOA1
RPS6KA2
ZKSCAN4
NKAPL
ZSCAN26
SLC25A13
BHLHA15
CAPN14
UGT1A10
NSMCE4A
GNB2
CCNG2
SELENBP1
ALG10B
UBE2L3
UBE3B
DSTN
TRAF6
RAG1
FBXL13
ARMC10
ARHGAP45
RAD54L2
C8orf37
C2CD4C
FAM170B
UBL7
ACAA2
OR2L5
MS4A1
SFTPD
WWOX
CHST11
PEX7
SRRM3
CCNI
SEPTIN7
NCF2
MOB4
DHTKD1
LANCL2
FBXO11
ELAC1
UCHL5
RO60
KDM5C
BIRC6
XKR3
RGPD2
RGPD1
EMC8
COX4I1
ATP6V0D1
AGRP
ING2
CYB561D1
ATXN7L2
CCDC113
MIA3
RHEX
IST1
DSTYK
TFPT
PRPF31
TVP23B
KDM3B
SIRPA
CYC1
GPAA1
EXOSC4
EIF3E
CREB5
AP5S1
TSEN15
TNFAIP8L1
PCBP2
BCR
RBM33
MRPL58
CRLS1
CD38
H3-3A
CALM2
ZMIZ2
WBP1
INO80B
NAA35
RBM14-RBM4
RBM14
ZNF572
CADM2
DRG2
VTA1
NMBR
UIMC1
MRPS23
MILR1
CLDN14
ZNF436
ZER1
ST6GALNAC6
DESI2
VRK2
IFT22
TRUB2
COQ4
ZSCAN25
ZC3H6
PDE4A
TENT4B
REEP2
SCN4A
ID2
NMNAT1
LZIC
RPS26
RBL1
GOLGA3
VPS50
HEPACAM2
UBE2D2
TRA2A
PTGER2
INO80C
MITD1
LARS2
IFI44
UBOX5
FASTKD5
BLOC1S6
MNAT1
SIT1
AKAP12
ZCCHC8
WIPI2
INTS5
GANAB
RNF139
TFR2
PRKRIP1
HIVEP2
NDUFAF5
ESF1
XAB2
STXBP2
PCP2
BCL2A1
GTPBP6
DIO2
PUS10
PEX13
LIMK1
ETF1
DIP2A
PCNA
TMEM230
PLCB2
YJU2
LIMS2
UGCG
FAM118A
GARS1
PPM1M
SAYSD1
TWF2
OASL
NCKAP1L
C18orf21
LOC100289561
TRAM2
SPDYE6
SOCS5
SYT7
SPINT2
PPP1R14A
DOCK2
RPS20
DNAJB12
AARS2
DUS1L
UNC50
COA5
PSEN2
TCTEX1D2
TMEM41A
SNIP1
DNALI1
NOP16
HIGD2A
CDK12
MED1
SLC24A4
PTGS1
ZNF268
GNG7
DHRS12
PHIP
MRPL42
PDF
NIP7
COG8
IRF5
NUDT7
N6AMT1
SELENOI
ADGRF3
NEDD9
C11orf80
MRPS26
GNRH2
EAPP
KIZ
PDGFD
MRPL38
TRIM65
CLK4
ZNF212
SLC35A1
CAB39L
ABHD12
SETDB2
MCL1
STX16
ATP5MF-PTCD1
ATP5MF
ANGEL1
SECISBP2L
ZNF789
KCTD5
ETV5
CD300LD
MRPL1
B4GALT7
ATE1
TMED9
NXPH3
ING3
BANK1
GOLPH3
CNEP1R1
ZNF333
ZNRF4
GABPB2
CCS
CCDC87
MRPL3
PPDPF
ITGA4
FAM53C
CDC25C
RAB8A
COMT
SLC35F5
COMMD1
COPS8
ZNF337
ACBD6
RABIF
IL24
TERF2
TENT5B
PBRM1
HS1BP3
GNL3
KPNA3
TCTEX1D4
PLK3
BTBD19
SFSWAP
CATSPERE
ADSS2
RBM28
POLE4
SRP9
RRBP1
SLC26A11
SGSH
KRR1
NDUFAF1
FPR1
TMEM101
RIC1
SCAND1
FERMT1
PKM
MARCHF10
CYLD
ENG
NFAT5
KAT5
RNASEH2C
TMEM219
AP3B1
DPP9
THAP7
IDH3B
PTPRA
CLIC3
TMEM262
RTN4
SLC39A13
TAF3
AOPEP
MAP3K21
RRAGB
TNPO3
ABCB10
SCP2
ANKRD36
FER
USP15
PAK2
POLR1F
ARL14EP
CXCR2
ASNS
KATNBL1
POR
EIF2D
RAD52
SMIM26
C1GALT1
GABPB1
TEFM
CUL2
ORM2
ORM1
CDCA7L
ZC3H13
B4GALNT3
LSM5
AVL9
WDR70
NUP155
SCN3B
CFAP20
ATXN1L
HGS
ARL16
TUT1
MTA2
CCDC137
EIF2B3
PPP1R14C
CCNL1
MGST3
TMEM168
KLHDC4
CEP120
PRMT5
FBXO22
ARHGAP22
HCFC2
GLT8D2
SNX8
FAM110A
OR51E2
MMP26
COX7A2
ASPSCR1
SMAD5
VPS4A
SPATC1L
RAB3IP
FAM76B
CEP57